CsGy4G007390 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G007390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 5457404 .. 5458018 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTCGCCTCATTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGGTTTATTTAGATCATTAATATTAACTCCGAGTCTTTGGATCATGATAATGTTGCTTTATATGAGTTGTTGCGCAGTCTGCATCATTCGGCTGCTAGTTCTGCTATATCTTCTCATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGATTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAACTAGTCGTCGTGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG

mRNA sequence

ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTCGCCTCATTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGTCTGCATCATTCGGCTGCTAGTTCTGCTATATCTTCTCATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGATTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAACTAGTCGTCGTGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG

Coding sequence (CDS)

ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTCGCCTCATTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGTCTGCATCATTCGGCTGCTAGTTCTGCTATATCTTCTCATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGATTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAACTAGTCGTCGTGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG

Protein sequence

MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPHLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRRVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Homology
[Close]
BLAST of CsGy4G007390 vs. NCBI nr
Match: KGN53530.1 (hypothetical protein Csa_4G064620 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0 

Query: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPHLNSSSSQSSLKDGSRVPVTEM 60
           MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSP LNSSSSQSSLKDGSRVPVTEM
Sbjct: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM 60

Query: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120
           SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ
Sbjct: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120

Query: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRRVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 180
           LVQLLFEESRSLSVSIQDLQGVISSLTSR VAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Sbjct: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 179

[Close]
BLAST of CsGy4G007390 vs. TrEMBL
Match: tr|A0A0A0KVC9|A0A0A0KVC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064620 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0 

Query: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPHLNSSSSQSSLKDGSRVPVTEM 60
           MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSP LNSSSSQSSLKDGSRVPVTEM
Sbjct: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM 60

Query: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120
           SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ
Sbjct: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120

Query: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRRVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 180
           LVQLLFEESRSLSVSIQDLQGVISSLTSR VAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Sbjct: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 179

The following BLAST results are available for this feature:
BLAST of CsGy4G007390 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53530.12.1e-8798.88hypothetical protein Csa_4G064620 [Cucumis sativus][more]
BLAST of CsGy4G007390 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G007390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G007390 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KVC9|A0A0A0KVC9_CUCSA1.4e-8798.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064620 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G007390.1CsGy4G007390.1mRNA