Csa2G360040.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G360040.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr2 : 16980947 .. 16981828 (+)
Sequence length	615

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAACCAACCAGAAAATCTTGCTTCTCCAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTAGAAAACCACTGCCAAAGTTTAACGATGAGGACGATTATCCTACAAGTGACTTTGATGATACAGAGGAAGTACTCACCAACTTATCCTCGTGTCACATATCTACAGATATTGTAACCTTTTGTTTCTATTTCCTATTATATGAAAATTGTTTCTCAGTTTCGATCTACTTCTCAACTCTCAGGAAATTGTATCAGAAATCAGAACTCGAGCAATGGAAAAGTTGAAACGAAAGACTAACCTGTCAGACAGCTTCTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAATCTGGAAATGAAGATAACATGGGAGATGAGTTCTACTCTGTTCGGAGTTTTCTCACGTGTTGTTCAACTGCAGCAACAAATGAAGCCTTCTTTTCTGTGGAAGCCAACTTTTCCCGATGTTCAAGCTTAAATGGTCTTAATTTTCTAGATGAGGATCTCAAGAGACGCACCATCTTGCAGGAAGTTTTTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCAGTCTTACTTCCGCCACTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGATGTCCAGATTTGGAGCTAAACTCTGTTTTTGTACTTTCTTGGTAACAAAACTCATCAAGTTATTTGATCTGATTAATTCCAACTACACAAATTACTTCATAAACATTTGTTTTAACCCTCTA

mRNA sequence

ATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTAGAAAACCACTGCCAAAGTTTAACGATGAGGACGATTATCCTACAAGTGACTTTGATGATACAGAGGAAGAAATTGTATCAGAAATCAGAACTCGAGCAATGGAAAAGTTGAAACGAAAGACTAACCTGTCAGACAGCTTCTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAATCTGGAAATGAAGATAACATGGGAGATGAGTTCTACTCTGTTCGGAGTTTTCTCACGTGTTGTTCAACTGCAGCAACAAATGAAGCCTTCTTTTCTGTGGAAGCCAACTTTTCCCGATGTTCAAGCTTAAATGGTCTTAATTTTCTAGATGAGGATCTCAAGAGACGCACCATCTTGCAGGAAGTTTTTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCAGTCTTACTTCCGCCACTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGA

Coding sequence (CDS)

ATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTAGAAAACCACTGCCAAAGTTTAACGATGAGGACGATTATCCTACAAGTGACTTTGATGATACAGAGGAAGAAATTGTATCAGAAATCAGAACTCGAGCAATGGAAAAGTTGAAACGAAAGACTAACCTGTCAGACAGCTTCTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAATCTGGAAATGAAGATAACATGGGAGATGAGTTCTACTCTGTTCGGAGTTTTCTCACGTGTTGTTCAACTGCAGCAACAAATGAAGCCTTCTTTTCTGTGGAAGCCAACTTTTCCCGATGTTCAAGCTTAAATGGTCTTAATTTTCTAGATGAGGATCTCAAGAGACGCACCATCTTGCAGGAAGTTTTTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCAGTCTTACTTCCGCCACTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGA

Protein sequence

MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSEIRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWLWSKGTKIVKTY*

Homology

[Close]

BLAST of Csa2G360040.1 vs. TrEMBL
Match: A0A0A0LRD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-117
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120
           IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180
           TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVKTY 205
           LPPLPKSPSESWLWSKGTKIVKTY
Sbjct: 181 LPPLPKSPSESWLWSKGTKIVKTY 204

[Close]

BLAST of Csa2G360040.1 vs. TrEMBL
Match: A0A061FAY9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60
Identity = 121/211 (57.35%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           M VFYQE+ P  S++C FLA  LK+AF NCH F         E++YPTSD DD  E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 61  EIRTRAMEKLKRKTNLS-DSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRS 120
           EIR+RAMEK+KR+ +L+ ++ SWVFSP+T EL+ITS   ++ D+  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 121 FLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLD------EDLKRRTILQEVFHCEGWPF 180
             + CS+A + EAF S +ANFSRCSSLN ++F D      +D +RR+I+QE  HCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVKT 204
           GLCRKAVLLPPLPKSPSESW W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWRKGTRLAKT 207

[Close]

BLAST of Csa2G360040.1 vs. TrEMBL
Match: W9QPV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 119/206 (57.77%), Postives = 154/206 (74.76%), Query Frame = 1


Query: 1   MGVFY-QEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIV 60
           M +FY +E+P NPS++C FLA  LKDAF NCH F   L   N +++YPTSDFD+ +E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 61  SEIRTRAMEKLKRKTNL--SDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSV 120
           S IR+ A+EKL+RK  L  SDSFSWV+S  T+ELYIT   IE+ ++    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 121 RSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCR 180
           +S  +CCS+AA+ + F SV+++FSR SSLNG++   ++ +RR+I+QE  HCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVK 203
           KAVLLPPLPKSPSESW W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWSWRKGTKTAK 204

[Close]

BLAST of Csa2G360040.1 vs. TrEMBL
Match: B9R7F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 123/210 (58.57%), Postives = 155/210 (73.81%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           MGVF+ EDPP P +KC FLA ALKDAF NC T R+ L   + E+++PTSD DD +E IVS
Sbjct: 1   MGVFHHEDPPTPPKKCKFLAAALKDAFSNCSTCRR-LSISSPEEEHPTSDIDDEQELIVS 60

Query: 61  EIRTRAMEKLKRKTN-LSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDE------ 120
            IR+RAMEK + ++  L+DSFSWVFSP T ELY+     ++ D+ G+++N  DE      
Sbjct: 61  AIRSRAMEKSRNRSFVLTDSFSWVFSPRTGELYLAPKIFQQKDDDGDDENNDDEDDEREE 120

Query: 121 FYSVRSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPF 180
           F SV S  +CCS+A + EAF S++ NFSRCSSL+ +  + +D  RR+IL+E  HCEGWPF
Sbjct: 121 FLSVGSCFSCCSSALSKEAFVSMKTNFSRCSSLSDVLEI-KDFPRRSILEEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVK 203
           GLCRKAVLLPPLPKSPSESW WSKG+KIVK
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWSKGSKIVK 208

[Close]

BLAST of Csa2G360040.1 vs. TrEMBL
Match: B9GNX6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-58
Identity = 119/209 (56.94%), Postives = 150/209 (71.77%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           MGVF+ E+ PNPS+KC FLA  LKD F NC T    +   + E++YPT+D DD +E IVS
Sbjct: 1   MGVFHHEEAPNPSKKCKFLAATLKDVFSNCSTCGGRISTSSPEEEYPTADVDDEQEVIVS 60

Query: 61  EIRTRAMEKLKRKTNL-SDSFSWVFSPATKELYITSMEIEKMDESGNEDN-----MGDEF 120
           EIR+RAMEKL+ K  + +DSFSWV+SP T EL++T   +++ D+ GN+DN       +EF
Sbjct: 61  EIRSRAMEKLRHKPFIFTDSFSWVYSPKTGELFVTPKAVQQKDD-GNDDNDEYDDTREEF 120

Query: 121 YSVRSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFG 180
           +SV S L+CCS+A + EAF S + NFSRCSS N   F   D  +R+ILQE  HC+GWPFG
Sbjct: 121 FSVGSCLSCCSSALSREAFVSAKPNFSRCSSFN--EFCFPDFPKRSILQEFCHCQGWPFG 180

Query: 181 LCRKAVLLPPLPKSPSESWLWSKGTKIVK 203
           L RKAVLLPPLPKSPSESW W KG +IVK
Sbjct: 181 LWRKAVLLPPLPKSPSESWSWRKGARIVK 206

[Close]

BLAST of Csa2G360040.1 vs. TAIR10
Match: AT1G47410.1 (AT1G47410.1 unknown protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 68/169 (40.24%), Postives = 95/169 (56.21%), Query Frame = 1


Query: 41  DEDDYPTSDFDDTEEEIVSEIRTRAMEKLKRKTNLS-DSFSWVFSPATKELYITSMEIEK 100
           D+D+ P  DFD   E +V EIR+RAMEKL++K     +  ++ F        +   +IE 
Sbjct: 35  DDDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKRRTGMEGLTYKF--------VKEYDIE- 94

Query: 101 MDESGNEDNMGDEFYSVRS-FLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDE----- 160
                      +EF SVRS F  CC +  + E + + +  FSR SSL GL   ++     
Sbjct: 95  -----------NEFCSVRSSFSECCMSDISIEGYMTAKTEFSRSSSLKGLELENQWKMHY 154

Query: 161 --DLKRRTILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWLWSKGTKI 201
             ++K+ +++QE  HC+GWPFGL RKA LLPPLPKSP+ESW W K T++
Sbjct: 155 VNEIKKGSVIQEFCHCQGWPFGLGRKAALLPPLPKSPAESWSWRKPTRV 183

[Close]

BLAST of Csa2G360040.1 vs. NCBI nr
Match: gi|449470182|ref|XP_004152797.1| (PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 3.3e-117
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120
           IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180
           TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVKTY 205
           LPPLPKSPSESWLWSKGTKIVKTY
Sbjct: 181 LPPLPKSPSESWLWSKGTKIVKTY 204

[Close]

BLAST of Csa2G360040.1 vs. NCBI nr
Match: gi|659087790|ref|XP_008444637.1| (PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.5e-114
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAG LKDAFCNCHTFRKPLPKFNDED+YPTSDFDDTEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGVLKDAFCNCHTFRKPLPKFNDEDEYPTSDFDDTEEEIVSE 60

Query: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120
           IRTRAMEKLKRK NLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKANLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVQSFL 120

Query: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180
           TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVKTY 205
           LPPLPKSPSESW WSKGTKIVKTY
Sbjct: 181 LPPLPKSPSESWSWSKGTKIVKTY 204

[Close]

BLAST of Csa2G360040.1 vs. NCBI nr
Match: gi|1009136424|ref|XP_015885517.1| (PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba])

HSP 1 Score: 245.4 bits (625), Expect = 8.9e-62
Identity = 122/206 (59.22%), Postives = 155/206 (75.24%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           M +FY E+ P PS++C FLA  LKD F NCHTF   +     ++D P SDFDD +E +VS
Sbjct: 1   MSIFYHEESPIPSKRCKFLAACLKDVFSNCHTFGDRVSTSIPDEDLPPSDFDDEQEVVVS 60

Query: 61  EIRTRAMEKLKRK-TNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRS 120
            IR+RAMEKL++K  NL+DSFSWV+SP T+ELYIT   +E+ +E G     G+EF SV+S
Sbjct: 61  AIRSRAMEKLRKKPNNLTDSFSWVYSPITRELYITPKGVEQKEEDG-----GEEFVSVKS 120

Query: 121 FLTC--CSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCR 180
             +C  CS+AA+ +AF SV+ +FSR  SLNGL F+D   +RR+I+QE+ HCEGWPFGLCR
Sbjct: 121 CFSCSCCSSAASRDAFLSVKTSFSRTPSLNGLEFID--FQRRSIIQELCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVK 203
           KAVLLPPLPKSPSESW WSKGTKI++
Sbjct: 181 KAVLLPPLPKSPSESWSWSKGTKIIR 199

[Close]

BLAST of Csa2G360040.1 vs. NCBI nr
Match: gi|590592490|ref|XP_007017295.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 239.6 bits (610), Expect = 4.9e-60
Identity = 121/211 (57.35%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           M VFYQE+ P  S++C FLA  LK+AF NCH F         E++YPTSD DD  E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 61  EIRTRAMEKLKRKTNLS-DSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRS 120
           EIR+RAMEK+KR+ +L+ ++ SWVFSP+T EL+ITS   ++ D+  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 121 FLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLD------EDLKRRTILQEVFHCEGWPF 180
             + CS+A + EAF S +ANFSRCSSLN ++F D      +D +RR+I+QE  HCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVKT 204
           GLCRKAVLLPPLPKSPSESW W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWRKGTRLAKT 207

[Close]

BLAST of Csa2G360040.1 vs. NCBI nr
Match: gi|703082889|ref|XP_010092069.1| (hypothetical protein L484_003373 [Morus notabilis])

HSP 1 Score: 239.2 bits (609), Expect = 6.4e-60
Identity = 119/206 (57.77%), Postives = 154/206 (74.76%), Query Frame = 1


Query: 1   MGVFY-QEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIV 60
           M +FY +E+P NPS++C FLA  LKDAF NCH F   L   N +++YPTSDFD+ +E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 61  SEIRTRAMEKLKRKTNL--SDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSV 120
           S IR+ A+EKL+RK  L  SDSFSWV+S  T+ELYIT   IE+ ++    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 121 RSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCR 180
           +S  +CCS+AA+ + F SV+++FSR SSLNG++   ++ +RR+I+QE  HCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVK 203
           KAVLLPPLPKSPSESW W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWSWRKGTKTAK 204

The following BLAST results are available for this feature:

BLAST of Csa2G360040.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRD5_CUCSA	2.3e-117	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1	[more]
A0A061FAY9_THECC	3.4e-60	57.35	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1	[more]
W9QPV8_9ROSA	4.4e-60	57.77	Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1	[more]
B9R7F5_RICCO	2.2e-59	58.57	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1	[more]
B9GNX6_POPTR	5.4e-58	56.94	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1	[more]

BLAST of Csa2G360040.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47410.1	1.5e-27	40.24	unknown protein	[more]

BLAST of Csa2G360040.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470182\|ref\|XP_004152797.1\|	3.3e-117	100.00	PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus]	[more]
gi\|659087790\|ref\|XP_008444637.1\|	1.5e-114	97.55	PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo]	[more]
gi\|1009136424\|ref\|XP_015885517.1\|	8.9e-62	59.22	PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba]	[more]
gi\|590592490\|ref\|XP_007017295.1\|	4.9e-60	57.35	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|703082889\|ref\|XP_010092069.1\|	6.4e-60	57.77	hypothetical protein L484_003373 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa2G360040	Csa2G360040	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa2G360040.1	Csa2G360040.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G360040.1.utr5p1	Csa2G360040.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G360040.1.cds1	Csa2G360040.1.cds1	CDS
Csa2G360040.1.cds2	Csa2G360040.1.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G360040.1.utr3p1	Csa2G360040.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36324	FAMILY NOT NAMED	coord: 1..202 score: 5.2