Csa2G248650 (gene) Cucumber (Chinese Long) v2

NameCsa2G248650
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 12040283 .. 12040606 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGGTAAGGAAGCGAAAAACGAGCAGATCTACGAGTTTTGTGGGACTCTGATTTTTGCAATATTAATTTGTTCTAAATTAACAATAATATTCTTTGTTGATTTGTTCCACACCCAATTAAGAGAACGATGGAGAAGGCAATAAACAAATTGGCTTAACACGTTAACAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

mRNA sequence

ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

Coding sequence (CDS)

ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

Protein sequence

MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR*
BLAST of Csa2G248650 vs. TrEMBL
Match: A0A0A0LLZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248650 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.4e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 53
          MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR
Sbjct: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 52

BLAST of Csa2G248650 vs. NCBI nr
Match: gi|700206688|gb|KGN61807.1| (hypothetical protein Csa_2G248650 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 53
          MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR
Sbjct: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 52

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LLZ7_CUCSA4.4e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248650 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206688|gb|KGN61807.1|6.3e-20100.00hypothetical protein Csa_2G248650 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU093489cucumber EST collection version 3.0transcribed_cluster
CU097573cucumber EST collection version 3.0transcribed_cluster
CU151909cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G248650.1Csa2G248650.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097573CU097573transcribed_cluster
CU093489CU093489transcribed_cluster
CU151909CU151909transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None