Csa2G248650.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G248650.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 12040283 .. 12040606 (+)
Sequence length159
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGGTAAGGAAGCGAAAAACGAGCAGATCTACGAGTTTTGTGGGACTCTGATTTTTGCAATATTAATTTGTTCTAAATTAACAATAATATTCTTTGTTGATTTGTTCCACACCCAATTAAGAGAACGATGGAGAAGGCAATAAACAAATTGGCTTAACACGTTAACAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

mRNA sequence

ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

Coding sequence (CDS)

ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

Protein sequence

MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR*
Homology
[Close]
BLAST of Csa2G248650.1 vs. TrEMBL
Match: A0A0A0LLZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248650 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.4e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 

Query: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 53
          MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR
Sbjct: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 52

[Close]
BLAST of Csa2G248650.1 vs. NCBI nr
Match: gi|700206688|gb|KGN61807.1| (hypothetical protein Csa_2G248650 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 

Query: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 53
          MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR
Sbjct: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 52

The following BLAST results are available for this feature:
BLAST of Csa2G248650.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLZ7_CUCSA4.4e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248650 PE=4 SV=1[more]
BLAST of Csa2G248650.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206688|gb|KGN61807.1|6.3e-20100.00hypothetical protein Csa_2G248650 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G248650Csa2G248650gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G248650.1Csa2G248650.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G248650.1.cds1Csa2G248650.1.cds1CDS
Csa2G248650.1.cds2Csa2G248650.1.cds2CDS