Csa2G248650 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G248650
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 12040283 .. 12040606 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGGTAAGGAAGCGAAAAACGAGCAGATCTACGAGTTTTGTGGGACTCTGATTTTTGCAATATTAATTTGTTCTAAATTAACAATAATATTCTTTGTTGATTTGTTCCACACCCAATTAAGAGAACGATGGAGAAGGCAATAAACAAATTGGCTTAACACGTTAACAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

mRNA sequence

ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

Coding sequence (CDS)

ATGAGGAAAAAGCAAAAAAAAGGGAACGAGTCTCTTACCTTGGAGGAAGCTTTGAAAGCTCAACGAATACGAAAAAATGGAGATTCGAAAGTGACGGAATTGAAGATGAAGAAGAACACCATTGAAAGATTGGGTCACCCATTAACGAGCGGAAGATAA

Protein sequence

MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR*
Homology
[Close]
BLAST of Csa2G248650 vs. TrEMBL
Match: A0A0A0LLZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248650 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.4e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 

Query: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 53
          MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR
Sbjct: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 52

[Close]
BLAST of Csa2G248650 vs. NCBI nr
Match: gi|700206688|gb|KGN61807.1| (hypothetical protein Csa_2G248650 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 

Query: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 53
          MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR
Sbjct: 1  MRKKQKKGNESLTLEEALKAQRIRKNGDSKVTELKMKKNTIERLGHPLTSGR 52

The following BLAST results are available for this feature:
BLAST of Csa2G248650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLZ7_CUCSA4.4e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248650 PE=4 SV=1[more]
BLAST of Csa2G248650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206688|gb|KGN61807.1|6.3e-20100.00hypothetical protein Csa_2G248650 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU093489cucumber EST collection version 3.0transcribed_cluster
CU097573cucumber EST collection version 3.0transcribed_cluster
CU151909cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G248650.1Csa2G248650.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097573CU097573transcribed_cluster
CU093489CU093489transcribed_cluster
CU151909CU151909transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G248650Silver-seed gourdcarcuB0501
Csa2G248650Silver-seed gourdcarcuB0341
Csa2G248650Watermelon (97103) v2cuwmbB110
Csa2G248650Watermelon (97103) v2cuwmbB123
Csa2G248650Wax gourdcuwgoB147
Csa2G248650Wax gourdcuwgoB182
Csa2G248650Cucumber (Chinese Long) v2cucuB077
Csa2G248650Cucumber (Gy14) v1cgycuB133
Csa2G248650Cucumber (Gy14) v1cgycuB477
Csa2G248650Cucumber (Gy14) v1cgycuB527
Csa2G248650Cucurbita maxima (Rimu)cmacuB438
Csa2G248650Cucurbita maxima (Rimu)cmacuB542
Csa2G248650Cucurbita maxima (Rimu)cmacuB588
Csa2G248650Cucurbita moschata (Rifu)cmocuB426
Csa2G248650Cucurbita moschata (Rifu)cmocuB531
Csa2G248650Cucurbita moschata (Rifu)cmocuB577
Csa2G248650Melon (DHL92) v3.5.1cumeB092
Csa2G248650Melon (DHL92) v3.5.1cumeB102
Csa2G248650Watermelon (Charleston Gray)cuwcgB104
Csa2G248650Watermelon (Charleston Gray)cuwcgB127
Csa2G248650Watermelon (Charleston Gray)cuwcgB146
Csa2G248650Watermelon (97103) v1cuwmB149
Csa2G248650Watermelon (97103) v1cuwmB155
Csa2G248650Cucurbita pepo (Zucchini)cpecuB232
Csa2G248650Cucurbita pepo (Zucchini)cpecuB267
Csa2G248650Cucurbita pepo (Zucchini)cpecuB540
Csa2G248650Cucurbita pepo (Zucchini)cpecuB704
Csa2G248650Bottle gourd (USVL1VR-Ls)culsiB093
Csa2G248650Cucumber (Gy14) v2cgybcuB056
Csa2G248650Cucumber (Gy14) v2cgybcuB295
Csa2G248650Melon (DHL92) v3.6.1cumedB081
Csa2G248650Melon (DHL92) v3.6.1cumedB096