Csa2G072460.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTGTAAAGAGGTTAGTAGAATGTGTAAAGTGACCAGGTAAGTAGTGTCAAGACTAAGTCATACATGTATGAGGTGAAAAGTGTGAGTAGGAGGTGTCATCACCAAATGCAAGGATTAATATAAATAAGGAAACTTTGGAGAAGGAATGCTACAAACTACTCGTTCATATGCTTCATTCCACTTTCACAATCTCCTAAATTGTGTCTAATAACAAGGGTAGGGCTTCTAGATCACAAGGAATGGAGAAAGAAGGTCAACAACATTTATGGGTGAAATTTTTAGTTGGAAGTGCACTTTTAGGTTTTTAGGATATATTGAAATTTTTATAGAATTTTATGAAGGATATTTTGCAAGTGTTTTAAAGTAGAACCTTCATGCTTTTATCTAAACTCACGAAGCTAGCACACATTTTTTAGAGAGTCAATGCCAAACACATATTCTACAAACACCCTGTAGAACACGTGGAAAGGGACATGTTAATTTTTTTTTAATATTATTTTCTAGGCAAAATGCACTTTTGATCCTTAAGGTTTAGTGTTATTGTCTATTTGGTATCTGAGGTTTCAAAAGTGACACTTGAATTTTCGAGATTTGGAAAATAGTTCTAAATAGTCCCTATGTTAAAGTTGACCAACGAAAAAAATGATATGATTCGTCATCTTCTTCCTCAACAAACTTGTCTCCGCCGTCCGTACCTTGTTTGATTCCGACATCAAAATCAATGTATTTTCTCCTCATCTTTTCAAATTCAATCACCAAATTAAATATTTTTTCTTCATTTTCTAGAAAAAAAAAATGGGCCAAAGAAAAAGAAGAATGAAAAGCTCGGTTCTAAGCTATGTTCTTTGGTTCCTTGAATCTCATTCCAATTCCTCATTAATGAATCCTAACACAAAATTCCCAATCGAAACAAACCAAATCTCATTCTCCCATTTACCCCTAAAAAAGGATTCCAAGAAATCAGATAACCAAAAAGACAAAAAAGAAAGGAAACCCCATTTATCTATAGGTGATGAAAAACAAAGCAATCCCCAAAAAGAAAAAACTTTGTGATCATGAACTTACATCTTTATATACCGTTAATGGCGAATAAAAAGTAACTAAAATTATTGCTATTAGCCTATTTTAGTACCACGTCCTTTCTTTTGGCTAGTCGACTAACTATCCACTTTAACAAAGACACCATTTAAAATTATTTTTTAAGTTTAGAAACGGTGAAACGAATAAATAACAACAAACCTCTCAACCACCCAAAGTCCCTTCTCTCGAAATCAAACCCTGAGCACTCTTCACTCTCCTCTAGTTCTCTCCAATTTTCAGTTCGGTTCCTCCCCTCCGATCAGAAGACGCCGGCGACCACCGCTTACCCTCTCCGATCAGACGACGACGGCGACTGAAACTCCGATCAGACCAGCCACGCTCTATCTCCGTTTTGGTTACTTGCTGTATCGGTCTAGAGGTTTTTATCTTTTCTTTTCTTTTCTTTAATGTGTATCAATGTTTGAGGAATGTTTCAACTGCTTTGACCGAACATATATATATATATATATATATATATATATNNNNNNNNNNNATATATATATATATGCTTTTTTATTCCTTACTTCGTATTAATATATAGTCCCAACGGAGATGTTGAAATTTATAAGAAACATTGCTTTTCGGGTGCGTTTAGAAAAAAATATGTATTTTTGTATTTATTTAATGTGGAGTTTGTTCTTATATGGTTTGAGTTTTTGGAATATTATCTGAATTTTTGGTATGGTTTTATCAGATTTGAGAGACATGATGCGTTCTTTGGAATGTTTTTGTTTTGAGAACATTTTCTTAATGAATTCATTCTATTCTTTATACTAGATGGCATCTTCCTCCTCGTCTACATCTACCAATAGTAGTCAATCATCCTCGTTTTTACATTTTGTTTTGGATGAAAGTGTGGTCTCTATTTAGGATTTTGTATTTGTATTGTAGTTTGGAACTAGTTTGATGGATTCAGACAGCTAATGCACTCTTTATTTATGTTTTAAAGAAATATTGCTGTGCTCTACCATATATGAGTTTATCTACAAATATTATCACAAAAGTTATTTTTTTAAAAAATTATGATGTGTCGTGTCCTAGTTTCTAGAAATTGGGCATGTCGTGCTGTGTTGTGTCGCGTGCTTCGTAGATCTAGATTAGTGGGAAAATCTAAAATGAGGTGCCACACATTGGGATATCTCTTTGGCAAGACCAATGGTTGGATAGTTCTAATTTGGGTTCTGTTCTCTACTCCCAAGTCTCCTTGGAATTGTAACTAATCCTAATGGTTCAGTACTGGAGCAATGAGGTGCAACTACTCTATCTTGGTTTGTCTCTTTTAGACAGTTTTTAAGGATGAAGAAGCTTTGGATTTTCATATTTTATTGGGTTCTTTAGAAGGCTGAAGAGTTCTTCACTCGGATTCAAGAAGTTGAAAGTTGTAGTATTTAGGCTTGTTTTTCAGTTAAATCTCTTACAAGCATTTGTTGGCATCTACTCCAATTGATAAATTTCTTTACATGGAAATTAAAATGGCCTCGTCAAGTAAACATCATTATTTGGGTTATGATTTTTGGAGCTCTCAACCACTCTCTTACAATCCAAAGAAAACTTCCTGCTCACTATTTGTTACCTTCAATTTGCCCTCTATGCTTGGCAGATGATGAGAGGTCTCAACATCTCTTCTTTTGATTGTCGCTATTCAAAGACATGTTGGTGGAAGTTGTTTTCAACGTTCAATCTTCCATGGGTTTTTATTGATTGGTCCAAGGACAGTGTGTTTTTGGCTTTGAGTGAGTCCTCCCTTGAAGTTGAAGCCTCTCTCTCAAATTTTATGGTCTAAAGTCCAGTTATAGCTTTTCTCTCCAAAATTTGATTTGAAATAAAGCAATGCATTTTTCAAGACAAGTCTCTAGCATGGTCCGATCATTTTGAGTTGCTCAAGTTAAGGCTTCATCTTGGTGTTCTCTCTCCCTGCCTTATGCAGATTATTCCATTTAAGTATATGGTTAAATTGGAATGCATTTATTTTACCAACATAATTTTCTAATATTGTTTGCATCTTCGCTCTAATCCAGATCACATGCTATGAAGCTGTGCGTTTGCAAGTTGTATGTGGAATTGCTTCTTTCTGGAGTTTGGTTTTGTGCAGCTCATTTGAAAGTTATTGGGGACCTGATCGGGAAGTTCCTCCTCCATCAGTCTTTTGGTGGGAAATGTCGCTTTTTGGGGTTTGTGGGGGTGTGGGTTAGGATACCATCTAATAAGAATACTTGATAAACACAAACAACATCAAGAGGGTTCTCTCTCCCAAAGCTCCATGATAGAAACCCTCACCCCCTCCCTCTGGTGTTCAACTTGTCTTATTTATAGCCAAGATGCCACTAGTTAATGACCCATGATACCCCTTGCTAATAAGTAATACCCTACAAATCTTACCCCTATACCCCTTTAACTAGTACTCTCACAGCTTGCTCTGTTATGGGATCGTTGGGGGAGAAATAACTGAGTTTTTAAAGGTGTGGAGATAGGTCCTAATGATGTGTGTCCTTTGGTGAGGTTTCATGTTTCTTTTTCTGCTCCAATTTCTCTGTAGTTGCTTTATAGACAATATTTCTTATTTGCAACCCCATTCTGTAGCGTGTGTATGCTTTTGTATACCTTCGTTTTGTTTTTTTTTAGTAAAAACAGTTGTTTCTATTAGAAAAAATCATTGTGGAAGTGACTTTAATCATAGGCTATCAAATTATGGAAGTGTTGTATTCTTTCATTTTTTTTCTGAATGAAATTTGTTTTTTTTATCCCAAAAAGGGCTATCGAATTGTTTGAGTTGTGTTTTTCTATGTTGTTTATCAATATATTGTTGTTTAAATTGTTTCTTGTGATATTTGATGCTTTGCAAACTATGTTGTTTTTCTATGGTTCTATGTTTCTCATGTAAACTAATTACTGATACATGCCTATGTTAAACAGAACATTGTTGCGTATAAACACGAGTCAAGTGGTCTTAGGCATTAGTTTATTTTAGTGGTATTTATAGAGAGCAATTTCCCTTTAAATATTATTCTTTTTTGATCAACTTGTTTCAATCCAGTATTATCATTTTGAAAGGCAAATGGCGACTTTTATAAGGGCTCTTAACAAAGCTCATCAAGTTCTATACTTGAAAGCTTCCCCCACCATTTTGAGAAGCAAATCGATGCCCCTTTTGCCTACTGCTTTCATTGGGTTGAAGAATCTCCAAAGAGAACTAACAAATCGCAATCAGAATCACCATGGTTGTTTCTCTAGTGTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCAAATGAAGATAGCAAGAGGCAATTATTCAATAGGTTCGTTCTTCCTTCATTTTGTTAATTAATTTTCGCATCCCTCTCGCTCTGTGTTTCTCTCAATTATTGACTCATTTGTTTTGATTGACAAGTCGTTTTGTTTGGTTGTTGGACTTAACAGGTTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGAGCTCTAATTAATGTTCTTGACCTGGTAATTTAGTCTTGTACTGCTGACAGACTGCGACTCACTATTTTTTCCCCCCCTTTTCTATCTTTTCTTCCTTTTTTATCTTTGCTTTTTTCTATTTTTTTCCCATTATTGTTATATATATACGGGTGAATATTTCACAATGTGTCCAAATATGCACAAATATATATATATATATATTTATATGTATATATTAGAAAAATGTATCTCCAACATGTCATGTCGTTTTGAAAATTGACATGTTGTCGTTGTGCTGTATTCAATGTCTGTTTCTTAGCTCGCAACTATCCCATAAAAATGAAAAATAGTAGAGATGCAACAAAGACTCAATAATTCTTCTACTCTTGCAGGAAAATCCAGATTTATGGAAGTGGTTAACAGGCCAAGAGCAACCCCCTGAAGCTTTGAAAACAAATCCTGTGAGCATCCAAGCATGGCATTAATTACCGAACCTTTTATCTTGATTAAATATGTGGTTTACAATTAAAGTATTGTATCATTGTAGGTATTTACTGGAGTGAAAGAGAAGGTGATAGACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAGCTCTTCCCTTTAACTTTATGCCTAATCTCTCTTTTAAGTATATAAGAACAGAAAAGCCCTGCTAAGGTTTCTATATAAATGGTAGATTGGGAATAAGTTAAACCAACAAAGACTTTGAAGGGAACATTGTTTAGTATGTCTCTCCCTTTAAACCCTTGATCTATTGTATATTAATAATTTTTTTCCTTGTATGCATTTAACGGTAACTACATTGTACCGATCTTGAACACTTTGTTGTTTTGATGTGCTTACCAATATAGATTGTATTTCTTTA ATGAGGTGTAAAGAGGTTAGTAGAATGTGTAAAGTGACCAGTTCGGTTCCTCCCCTCCGATCAGAAGACGCCGGCGACCACCGCTTACCCTCTCCGATCAGACGACGACGGCGACTGAAACTCCGATCAGACCAGCCACGCTCTATCTCCGTTTTGGTTACTTGCTGTATCGGTCTAGAGTATTATCATTTTGAAAGGCAAATGGCGACTTTTATAAGGGCTCTTAACAAAGCTCATCAAGTTCTATACTTGAAAGCTTCCCCCACCATTTTGAGAAGCAAATCGATGCCCCTTTTGCCTACTGCTTTCATTGGGTTGAAGAATCTCCAAAGAGAACTAACAAATCGCAATCAGAATCACCATGGTTGTTTCTCTAGTGTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCAAATGAAGATAGCAAGAGGCAATTATTCAATAGGTTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGAGCTCTAATTAATGTTCTTGACCTGGAAAATCCAGATTTATGGAAGTGGTTAACAGGCCAAGAGCAACCCCCTGAAGCTTTGAAAACAAATCCTGTATTTACTGGAGTGAAAGAGAAGGTGATAGACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAG ATGAGGTGTAAAGAGGTTAGTAGAATGTGTAAAGTGACCAGTTCGGTTCCTCCCCTCCGATCAGAAGACGCCGGCGACCACCGCTTACCCTCTCCGATCAGACGACGACGGCGACTGAAACTCCGATCAGACCAGCCACGCTCTATCTCCGTTTTGGTTACTTGCTGTATCGGTCTAGAGTATTATCATTTTGAAAGGCAAATGGCGACTTTTATAAGGGCTCTTAACAAAGCTCATCAAGTTCTATACTTGAAAGCTTCCCCCACCATTTTGAGAAGCAAATCGATGCCCCTTTTGCCTACTGCTTTCATTGGGTTGAAGAATCTCCAAAGAGAACTAACAAATCGCAATCAGAATCACCATGGTTGTTTCTCTAGTGTCCATTTCTCTTCGACAAGTACAAATCCTGACATCGATCTCTCAAATGAAGATAGCAAGAGGCAATTATTCAATAGGTTGCTGTACCGGAGCAAACAACGAGGGTTTTTGGAATTGGATTTGATACTTGGGAAATGGGTAGAGGATCACATCCATTCCTTAGATGCAGATGGTATTCGAGCTCTAATTAATGTTCTTGACCTGGAAAATCCAGATTTATGGAAGTGGTTAACAGGCCAAGAGCAACCCCCTGAAGCTTTGAAAACAAATCCTGTATTTACTGGAGTGAAAGAGAAGGTGATAGACAATCTCAACAAACATGCCTCACCTGAGACAAGAACACCACCTGGCCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAAAGGTCGAGATGGCCCCATAACAGGAAATCAGTAG MRCKEVSRMCKVTSSVPPLRSEDAGDHRLPSPIRRRRRLKLRSDQPRSISVLVTCCIGLEYYHFERQMATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGCFSSVHFSSTSTNPDIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADGIRALINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVIDNLNKHASPETRTPPGQQWVRGWDDFKKGRDGPITGNQ*
BLAST of Csa2G072460.1 vs. Swiss-Prot
Match: SDAF2_ARATH (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana GN=SDHAF2 PE=1 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.2e-53 Identity = 103/193 (53.37%), Postives = 138/193 (71.50%), Query Frame = 1
BLAST of Csa2G072460.1 vs. Swiss-Prot
Match: SDHF2_DICDI (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0293946 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06 Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 1
BLAST of Csa2G072460.1 vs. Swiss-Prot
Match: SDHF2_CRYNJ (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNA04680 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 31/100 (31.00%), Postives = 51/100 (51.00%), Query Frame = 1
BLAST of Csa2G072460.1 vs. Swiss-Prot
Match: SDHF2_CRYNB (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNBA4490 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 31/100 (31.00%), Postives = 51/100 (51.00%), Query Frame = 1
BLAST of Csa2G072460.1 vs. Swiss-Prot
Match: SDHF2_SCHJY (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=SJAG_01895 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06 Identity = 25/83 (30.12%), Postives = 50/83 (60.24%), Query Frame = 1
BLAST of Csa2G072460.1 vs. TrEMBL
Match: A0A0A0LKF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G072460 PE=4 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 9.9e-153 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
BLAST of Csa2G072460.1 vs. TrEMBL
Match: A0A068TQT2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022341001 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57 Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 1
BLAST of Csa2G072460.1 vs. TrEMBL
Match: M5WAU4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012247mg PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.7e-57 Identity = 105/150 (70.00%), Postives = 127/150 (84.67%), Query Frame = 1
BLAST of Csa2G072460.1 vs. TrEMBL
Match: V4TAF7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032866mg PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.5e-57 Identity = 102/136 (75.00%), Postives = 125/136 (91.91%), Query Frame = 1
BLAST of Csa2G072460.1 vs. TrEMBL
Match: A0A061G020_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014776 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.5e-57 Identity = 121/198 (61.11%), Postives = 144/198 (72.73%), Query Frame = 1
BLAST of Csa2G072460.1 vs. TAIR10
Match: AT5G51040.3 (AT5G51040.3 unknown protein) HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52 Identity = 103/202 (50.99%), Postives = 138/202 (68.32%), Query Frame = 1
BLAST of Csa2G072460.1 vs. NCBI nr
Match: gi|700206113|gb|KGN61232.1| (hypothetical protein Csa_2G072460 [Cucumis sativus]) HSP 1 Score: 547.4 bits (1409), Expect = 1.4e-152 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
BLAST of Csa2G072460.1 vs. NCBI nr
Match: gi|449470271|ref|XP_004152841.1| (PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Cucumis sativus]) HSP 1 Score: 411.0 bits (1055), Expect = 1.6e-111 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Csa2G072460.1 vs. NCBI nr
Match: gi|659082578|ref|XP_008441916.1| (PREDICTED: uncharacterized protein LOC103485912 [Cucumis melo]) HSP 1 Score: 387.1 bits (993), Expect = 2.5e-104 Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 1
BLAST of Csa2G072460.1 vs. NCBI nr
Match: gi|661898327|emb|CDO98294.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 231.5 bits (589), Expect = 1.7e-57 Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 1
BLAST of Csa2G072460.1 vs. NCBI nr
Match: gi|595849161|ref|XP_007209673.1| (hypothetical protein PRUPE_ppa012247mg [Prunus persica]) HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57 Identity = 105/150 (70.00%), Postives = 127/150 (84.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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