Csa2G060510 (gene) Cucumber (Chinese Long) v2

NameCsa2G060510
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 4804973 .. 4805233 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGGTCATGTCAAATCTTGCTAATTCCCACGTTCTCAAACATTCACAAGATACACAACTCTACAAACTAACCTTGCAACTTTACCATTGCCATGATCGTTTCTCATGCAGCAACACATGTCGCCGAGGAAGAACCTATACAATTACTAGAACGGATCCTGCTGTTGCCATAGAAGTGAATCCTCCAACAATGACTTTCCAGTTCGGTTCTTCGAGAACACTTCTTCAGTTATTCTTGCAGCAGCTCGATCAGTGA

mRNA sequence

ATGGCTCAGGTCATGTCAAATCTTGCTAATTCCCACGTTCTCAAACATTCACAAGATACACAACTCTACAAACTAACCTTGCAACTTTACCATTGCCATGATCGTTTCTCATGCAGCAACACATGTCGCCGAGGAAGAACCTATACAATTACTAGAACGGATCCTGCTGTTGCCATAGAAGTGAATCCTCCAACAATGACTTTCCAGTTCGGTTCTTCGAGAACACTTCTTCAGTTATTCTTGCAGCAGCTCGATCAGTGA

Coding sequence (CDS)

ATGGCTCAGGTCATGTCAAATCTTGCTAATTCCCACGTTCTCAAACATTCACAAGATACACAACTCTACAAACTAACCTTGCAACTTTACCATTGCCATGATCGTTTCTCATGCAGCAACACATGTCGCCGAGGAAGAACCTATACAATTACTAGAACGGATCCTGCTGTTGCCATAGAAGTGAATCCTCCAACAATGACTTTCCAGTTCGGTTCTTCGAGAACACTTCTTCAGTTATTCTTGCAGCAGCTCGATCAGTGA

Protein sequence

MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIEVNPPTMTFQFGSSRTLLQLFLQQLDQ*
BLAST of Csa2G060510 vs. TrEMBL
Match: A0A0A0LGV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060510 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.0e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIE 60
          MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIE
Sbjct: 1  MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIE 60

Query: 61 VNPPTMTFQFGSSRTLLQLFLQQLDQ 87
          VNPPTMTFQFGSSRTLLQLFLQQLDQ
Sbjct: 61 VNPPTMTFQFGSSRTLLQLFLQQLDQ 86

BLAST of Csa2G060510 vs. NCBI nr
Match: gi|700206051|gb|KGN61170.1| (hypothetical protein Csa_2G060510 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIE 60
          MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIE
Sbjct: 1  MAQVMSNLANSHVLKHSQDTQLYKLTLQLYHCHDRFSCSNTCRRGRTYTITRTDPAVAIE 60

Query: 61 VNPPTMTFQFGSSRTLLQLFLQQLDQ 87
          VNPPTMTFQFGSSRTLLQLFLQQLDQ
Sbjct: 61 VNPPTMTFQFGSSRTLLQLFLQQLDQ 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LGV1_CUCSA3.0e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060510 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206051|gb|KGN61170.1|4.3e-42100.00hypothetical protein Csa_2G060510 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU093320cucumber EST collection version 3.0transcribed_cluster
CU143091cucumber EST collection version 3.0transcribed_cluster
CU150924cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G060510.1Csa2G060510.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU093320CU093320transcribed_cluster
CU143091CU143091transcribed_cluster
CU150924CU150924transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G060510CSPI02G06360Wild cucumber (PI 183967)cpicuB065
Csa2G060510CsGy2G006510Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G060510Silver-seed gourdcarcuB0625
Csa2G060510Silver-seed gourdcarcuB0643
Csa2G060510Silver-seed gourdcarcuB0806
Csa2G060510Silver-seed gourdcarcuB1009
Csa2G060510Watermelon (97103) v2cuwmbB109
Csa2G060510Watermelon (97103) v2cuwmbB144
Csa2G060510Wax gourdcuwgoB136
Csa2G060510Wax gourdcuwgoB215
Csa2G060510Cucumber (Chinese Long) v2cucuB004
Csa2G060510Cucumber (Gy14) v1cgycuB096
Csa2G060510Cucurbita maxima (Rimu)cmacuB077
Csa2G060510Cucurbita maxima (Rimu)cmacuB122
Csa2G060510Cucurbita maxima (Rimu)cmacuB165
Csa2G060510Cucurbita maxima (Rimu)cmacuB786
Csa2G060510Cucurbita moschata (Rifu)cmocuB067
Csa2G060510Cucurbita moschata (Rifu)cmocuB109
Csa2G060510Cucurbita moschata (Rifu)cmocuB150
Csa2G060510Cucurbita moschata (Rifu)cmocuB779
Csa2G060510Melon (DHL92) v3.5.1cumeB108
Csa2G060510Melon (DHL92) v3.5.1cumeB139
Csa2G060510Watermelon (Charleston Gray)cuwcgB103
Csa2G060510Watermelon (Charleston Gray)cuwcgB150
Csa2G060510Watermelon (97103) v1cuwmB163
Csa2G060510Watermelon (97103) v1cuwmB170
Csa2G060510Cucurbita pepo (Zucchini)cpecuB006
Csa2G060510Cucurbita pepo (Zucchini)cpecuB098
Csa2G060510Cucurbita pepo (Zucchini)cpecuB106
Csa2G060510Cucurbita pepo (Zucchini)cpecuB373
Csa2G060510Cucurbita pepo (Zucchini)cpecuB666
Csa2G060510Cucurbita pepo (Zucchini)cpecuB811
Csa2G060510Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G060510Bottle gourd (USVL1VR-Ls)culsiB132
Csa2G060510Cucumber (Gy14) v2cgybcuB018
Csa2G060510Melon (DHL92) v3.6.1cumedB104
Csa2G060510Melon (DHL92) v3.6.1cumedB132