Csa2G047810.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G047810.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ring finger protein, putative; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr2 : 3999146 .. 4000582 (+)
Sequence length	1284

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAATTCCATTTTCTTTCTCAACCTTCAAACATACATCCATGGCTACTCTCTCTCAACCCATTTCTAATTTTCCTCTTCCACCGCCGTCACCGGATACCCAATCCGACGGCGGTTTTAATTTAGACAACGAAGTAAGTCCCACAATTCTCTTAGCCATAATCATCCTCGCCATTATCTTTTTCTTCTCCGGCCTCCTCCACCTTCTCCTCCGATTCTTCCACAAACCCCAAATCAGAACTGACCCAGAAGATTCCACTGCCGGCGACGGCGGTGCCTCTGCTTTCCAAGGTCAACTCCGGCAGCTGTTTCACCTCCATGACGCCGGCGTTGACCAATCCTTCATCGATACACTCCCTGTTTTTCTTTATAAAGCCATAATCGGCTTGAAATTAGACCCATTTGATTGCTCTGTTTGTCTCTGTGAATTTCAGCCTAATGATAAGCTTCGATTATTGACGAAATGCAGCCATGCTTTTCATATGGATTGCATAGACACTTGGCTTTTGACTCATTCTACTTGTCCTCTCTGTCGTGCGAGCTTGGTTTCTGATTTCGCTGCCATTAATGGCGGATTCTCGTCTCCAATTGTTGGAGTTCTTGAATCTGCAAGTAATAGTTCGAGAGAAATTGGGGAAGTTCACACCGGTTCGTTTCTTGGTTTTCTTGGGGATGTGTCGGATTTTACTGAATTGAAAACAGAGGAACCTCCGGCAACGGGAGCAGAGACGGTGGTTCCGATTAAATTAGGGAAGTTTAAGAATTTGGAGAGTAATGGAGAAGGGAGTAGTAATAATAGCAATGTGGGTTCGAGGAGGTGTTTTTCAATGGGGTCTTTTGGGTATGTAATGGATGAAAATTCGTCTCTTCAAGTTCCCATCAGGACGCCGGCGGTGAGGAAACAGGTGAGGAAGAAGAAGGATCTGCCATTGATGCTCGGGAGCAGAGCGGCAATATCTGAATGCGATTGCGAATCAAGAAGAGAGTTTAATTTTGAGGAATTGAGTGGGAGAGTTGAGAGTTTCCGCCATGGGAACTCGAAGGACAGCTGTGAAGAGAAGGTAGCCGGCGCCGGTGACAGAGTGGCGGTGATGGATTTGTCTAGAAGGGCGTTTTCGTTTCATTTTCCTGCGAATCGGAACCGACCCAGATCGGAAAATGGGATGGGAATGATGGATGAAGAGAATCAGAGAAGAAACAGTTTGGAATTTGTTGAGAATCGGCCGTCGTTTGTGAGAAGAACGTTACAGTGGCTGATGGGAAAGAACAACAATAGGATTGTTCATTCATCTTTTACACCTAATGATGATGATGATCATTCTTGATTTTTTTTCTTTTCTTTCTTTTGAGATTTTGAGTAACTTTTAATGGGGATTTCAAATTTGAGTGCAGAAATTATAAAAATTCAAAACTCAAAAGAATTAGAAAATGTCGAT

mRNA sequence

ATGGCTACTCTCTCTCAACCCATTTCTAATTTTCCTCTTCCACCGCCGTCACCGGATACCCAATCCGACGGCGGTTTTAATTTAGACAACGAAGTAAGTCCCACAATTCTCTTAGCCATAATCATCCTCGCCATTATCTTTTTCTTCTCCGGCCTCCTCCACCTTCTCCTCCGATTCTTCCACAAACCCCAAATCAGAACTGACCCAGAAGATTCCACTGCCGGCGACGGCGGTGCCTCTGCTTTCCAAGGTCAACTCCGGCAGCTGTTTCACCTCCATGACGCCGGCGTTGACCAATCCTTCATCGATACACTCCCTGTTTTTCTTTATAAAGCCATAATCGGCTTGAAATTAGACCCATTTGATTGCTCTGTTTGTCTCTGTGAATTTCAGCCTAATGATAAGCTTCGATTATTGACGAAATGCAGCCATGCTTTTCATATGGATTGCATAGACACTTGGCTTTTGACTCATTCTACTTGTCCTCTCTGTCGTGCGAGCTTGGTTTCTGATTTCGCTGCCATTAATGGCGGATTCTCGTCTCCAATTGTTGGAGTTCTTGAATCTGCAAGTAATAGTTCGAGAGAAATTGGGGAAGTTCACACCGGTTCGTTTCTTGGTTTTCTTGGGGATGTGTCGGATTTTACTGAATTGAAAACAGAGGAACCTCCGGCAACGGGAGCAGAGACGGTGGTTCCGATTAAATTAGGGAAGTTTAAGAATTTGGAGAGTAATGGAGAAGGGAGTAGTAATAATAGCAATGTGGGTTCGAGGAGGTGTTTTTCAATGGGGTCTTTTGGGTATGTAATGGATGAAAATTCGTCTCTTCAAGTTCCCATCAGGACGCCGGCGGTGAGGAAACAGGTGAGGAAGAAGAAGGATCTGCCATTGATGCTCGGGAGCAGAGCGGCAATATCTGAATGCGATTGCGAATCAAGAAGAGAGTTTAATTTTGAGGAATTGAGTGGGAGAGTTGAGAGTTTCCGCCATGGGAACTCGAAGGACAGCTGTGAAGAGAAGGTAGCCGGCGCCGGTGACAGAGTGGCGGTGATGGATTTGTCTAGAAGGGCGTTTTCGTTTCATTTTCCTGCGAATCGGAACCGACCCAGATCGGAAAATGGGATGGGAATGATGGATGAAGAGAATCAGAGAAGAAACAGTTTGGAATTTGTTGAGAATCGGCCGTCGTTTGTGAGAAGAACGTTACAGTGGCTGATGGGAAAGAACAACAATAGGATTGTTCATTCATCTTTTACACCTAATGATGATGATGATCATTCTTGA

Coding sequence (CDS)

ATGGCTACTCTCTCTCAACCCATTTCTAATTTTCCTCTTCCACCGCCGTCACCGGATACCCAATCCGACGGCGGTTTTAATTTAGACAACGAAGTAAGTCCCACAATTCTCTTAGCCATAATCATCCTCGCCATTATCTTTTTCTTCTCCGGCCTCCTCCACCTTCTCCTCCGATTCTTCCACAAACCCCAAATCAGAACTGACCCAGAAGATTCCACTGCCGGCGACGGCGGTGCCTCTGCTTTCCAAGGTCAACTCCGGCAGCTGTTTCACCTCCATGACGCCGGCGTTGACCAATCCTTCATCGATACACTCCCTGTTTTTCTTTATAAAGCCATAATCGGCTTGAAATTAGACCCATTTGATTGCTCTGTTTGTCTCTGTGAATTTCAGCCTAATGATAAGCTTCGATTATTGACGAAATGCAGCCATGCTTTTCATATGGATTGCATAGACACTTGGCTTTTGACTCATTCTACTTGTCCTCTCTGTCGTGCGAGCTTGGTTTCTGATTTCGCTGCCATTAATGGCGGATTCTCGTCTCCAATTGTTGGAGTTCTTGAATCTGCAAGTAATAGTTCGAGAGAAATTGGGGAAGTTCACACCGGTTCGTTTCTTGGTTTTCTTGGGGATGTGTCGGATTTTACTGAATTGAAAACAGAGGAACCTCCGGCAACGGGAGCAGAGACGGTGGTTCCGATTAAATTAGGGAAGTTTAAGAATTTGGAGAGTAATGGAGAAGGGAGTAGTAATAATAGCAATGTGGGTTCGAGGAGGTGTTTTTCAATGGGGTCTTTTGGGTATGTAATGGATGAAAATTCGTCTCTTCAAGTTCCCATCAGGACGCCGGCGGTGAGGAAACAGGTGAGGAAGAAGAAGGATCTGCCATTGATGCTCGGGAGCAGAGCGGCAATATCTGAATGCGATTGCGAATCAAGAAGAGAGTTTAATTTTGAGGAATTGAGTGGGAGAGTTGAGAGTTTCCGCCATGGGAACTCGAAGGACAGCTGTGAAGAGAAGGTAGCCGGCGCCGGTGACAGAGTGGCGGTGATGGATTTGTCTAGAAGGGCGTTTTCGTTTCATTTTCCTGCGAATCGGAACCGACCCAGATCGGAAAATGGGATGGGAATGATGGATGAAGAGAATCAGAGAAGAAACAGTTTGGAATTTGTTGAGAATCGGCCGTCGTTTGTGAGAAGAACGTTACAGTGGCTGATGGGAAAGAACAACAATAGGATTGTTCATTCATCTTTTACACCTAATGATGATGATGATCATTCTTGA

Protein sequence

MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTPNDDDDHS*

Homology

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BLAST of Csa2G047810.1 vs. Swiss-Prot
Match: ATL13_ARATH (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 7.0e-85
Identity = 208/462 (45.02%), Postives = 266/462 (57.58%), Query Frame = 1


Query: 9   SNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTD 68
           S+ P  PP    +S   F+L++++SP+ILL IIIL+IIFF SGLLHLL+RF   P  R D
Sbjct: 25  SSLPQEPPL-SLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR-D 84

Query: 69  PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLC 128
            ED        +A QGQL+QLFHLHD+GVDQSFIDTLPVF YK+IIGLK  PFDC+VCLC
Sbjct: 85  REDYF---DNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLC 144

Query: 129 EFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLE 188
           EF+  DKLRLL KCSHAFHMDCIDTWLL+HSTCPLCR+SL+SD ++     SS ++ VLE
Sbjct: 145 EFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLL-VLE 204

Query: 189 SAS-------------------NSSREIGEVHTG----SFLGFLGDVSDFTELKTEEPPA 248
           SAS                   N   ++   H G    + LG     S   +   +    
Sbjct: 205 SASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELG 264

Query: 249 TGAETVVP--IKLGKFKNLESNGEGSSNNSNVGS------RRCFSMGSFGYVMDENSSLQ 308
                VVP  +KLGKF+N++  GEG+S+N+N+G+      RRCFSMGS+ Y+MDE ++L+
Sbjct: 265 GSVGKVVPFSVKLGKFRNIDI-GEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLK 324

Query: 309 VPIRTPAVRKQVRKKKDLPLMLGSRAAISEC--DCESRREFNFEELSGRVESFRHGN--- 368
           V + T   +KQ  K + LP   G R A+SEC  D   R +F+       VE     N   
Sbjct: 325 VHVST---KKQSSKNRGLP---GHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVE 384

Query: 369 ------------SKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDE 422
                        K     KV G  D   V   S RAFSF     RN P +    G  +E
Sbjct: 385 RESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDAMIESGC-EE 444

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BLAST of Csa2G047810.1 vs. Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.1e-73
Identity = 180/448 (40.18%), Postives = 251/448 (56.03%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           M +    IS+ P PP  P   +    NL+++++P ILL IIIL+IIFF SGLLH+L++F 
Sbjct: 8   MKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFL 67

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
             P  R   ED        +A QGQL+QLF+LHD+GVDQS IDTLPVF YK+I+GLK+ P
Sbjct: 68  LTPS-RESREDYF---DNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISP 127

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDC VCLCEF+  DKLRLL KCSHAFH++CIDTWLL+HSTCPLCR++L+S F++ +   S
Sbjct: 128 FDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSS-HHNLS 187

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGF-LGDVSDFTELKTEEPPATG-------AETVV 240
           S  + VLES  +S   +  + + S LG+ + + S+ T +++               E VV
Sbjct: 188 SSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVV 247

Query: 241 P--IKLGKFKNLESNGEG--------SSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRT 300
           P  +KLGKF+N++  GEG        S N+ NV  RRC SMGS+ Y+MD+ ++L+V + T
Sbjct: 248 PLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST 307

Query: 301 PAVRKQVRKKKDLPLMLGSRAAISECDCE-----------SRREFNFEE--LSGRVESFR 360
               K++  K  +P     R  +SEC  +            R  F+  +  L G+ E  +
Sbjct: 308 ----KKLSGKDRVP---SHRTVMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQK 367

Query: 361 HGNSKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRRNSLE 418
             +++DS    V+ +              S  FP +R  P         +E  +  NS  
Sbjct: 368 GTSARDSDCSFVSSS--------------SLRFPNHRIPP---------EESLKSENSES 419

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BLAST of Csa2G047810.1 vs. Swiss-Prot
Match: ATL46_ARATH (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.4e-54
Identity = 137/335 (40.90%), Postives = 182/335 (54.33%), Query Frame = 1


Query: 3   TLSQPISNFPLPPP----------SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGL 62
           T+ Q   NF  PPP          SP   S G     N +SP +L  I+ILA++FF SGL
Sbjct: 7   TIEQKDGNFAYPPPFYKDPILSPPSPPPPSSG-----NRISPAVLFVIVILAVLFFISGL 66

Query: 63  LHLLLRFFHKPQIRTD-------PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTL 122
           LHLL+RF  K    T        PE ST+      A Q QL+QLFHL+D+G+DQ+FID L
Sbjct: 67  LHLLVRFLIKHPSATASSRSNRFPEISTS-----DALQRQLQQLFHLNDSGLDQAFIDAL 126

Query: 123 PVFLYKAIIG---------LKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLL 182
           PVF YK I+G            +PFDC+VCLCEF   DKLRLL  CSHAFH++CIDTWL 
Sbjct: 127 PVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ 186

Query: 183 THSTCPLCRASLVS-DFAAINGGFSSPIV-----GVLESASNSSREIGEVHTGSFLGFLG 242
           ++STCPLCR +L S  F+  N  F    +     GV E+ S  + EI E+          
Sbjct: 187 SNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTENGSQKTMEIQEI---------- 246

Query: 243 DVSDFTELKTEEPPATGAETVVPIKLGKFKNLES--NGE-------GSSNNSNVGSRRCF 294
                             + V+P++LGKFK L++  NG+       G +++SN+ +RRCF
Sbjct: 247 ---------------VVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCF 305

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BLAST of Csa2G047810.1 vs. Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-47
Identity = 114/289 (39.45%), Postives = 155/289 (53.63%), Query Frame = 1


Query: 12  PLPPPSP--------DTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 71
           P   PSP        D+ S      +N +SP IL  I++L++IFF   +LHLL+R++ K 
Sbjct: 21  PSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 80

Query: 72  Q---IRTDPEDSTAGD--GGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 131
           +   + + P +S        +  +Q QL+QLFHLHD+G+DQ+ ID LPVFLYK I G K 
Sbjct: 81  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK- 140

Query: 132 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVS-------- 191
           +PFDC+VCLCEF  +DKLRLL  CSHAFH+DCIDTWLL++STCPLCR +L S        
Sbjct: 141 EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYP 200

Query: 192 -----DFAAINGGFSSPIVGVLESASNS-SREIGEVHTGSFLGFLGDVSDFTELKTEEPP 251
                 FA  +GG    +  V + A N   + +  V  G F                   
Sbjct: 201 DFNFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKF--------------RSSNI 260

Query: 252 ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDEN 274
               E VV             G G +++S++ +RRCFSMGS+ Y++ E+
Sbjct: 261 VNNGEVVV------------GGGGETSSSSLDNRRCFSMGSYQYIVAES 282

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BLAST of Csa2G047810.1 vs. Swiss-Prot
Match: ATL50_ARATH (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana GN=ATL50 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.6e-41
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1


Query: 17  SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDSTAGD 76
           S  + +D  F+L   +SP +LL I +L+IIFF + L+HLL++F H+PQ R D     A D
Sbjct: 17  SYSSSTDKDFDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDD----AYD 76

Query: 77  G---GASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPN 136
           G    ++A QG+ +  F+LHDA +DQSFID LP+  YK +IGL+ D  DC+VCL EF   
Sbjct: 77  GITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAE 136

Query: 137 DKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNS 196
           D+LRLL KCSHAFH++CIDTWLLT+STCPLCR +L+          SS IV V ES  ++
Sbjct: 137 DELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSSTIVLVHESDGDN 194

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BLAST of Csa2G047810.1 vs. TrEMBL
Match: A0A0A0LH59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G047810 PE=4 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 5.3e-249
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF
Sbjct: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
           HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP
Sbjct: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS
Sbjct: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240
           SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK
Sbjct: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240

Query: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300
           NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG
Sbjct: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300

Query: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360
           SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF
Sbjct: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360

Query: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420
           HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP
Sbjct: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420

Query: 421 NDDDDHS 428
           NDDDDHS
Sbjct: 421 NDDDDHS 427

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BLAST of Csa2G047810.1 vs. TrEMBL
Match: V4UKQ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008104mg PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.3e-111
Identity = 259/491 (52.75%), Postives = 302/491 (61.51%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNLDN+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLDNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P D+LRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREIG-----------EVHTGSFLGFLGDVS------DFTELKTEEPPAT 244
           V VLES S SSREIG            + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIGGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 GA-----------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
            A           E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVMDENS 
Sbjct: 258 DAVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMDENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGSNISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810.1 vs. TrEMBL
Match: A0A067F897_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042083mg PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.7e-109
Identity = 256/491 (52.14%), Postives = 300/491 (61.10%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNL+N+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREI-----------GEVHTGSFLGFLGDVS------DFTELKTEEPP-- 244
           V VLES S SSREI             + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIAGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 ---------ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
                        E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVM+ENS 
Sbjct: 258 DVVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMEENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGANISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810.1 vs. TrEMBL
Match: B9IM58_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0018s10760g PE=4 SV=2)

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 247/456 (54.17%), Postives = 293/456 (64.25%), Query Frame = 1


Query: 14  PPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIR-TDPEDS 73
           PPP P   +DG FNL   VSP+ILL IIILAIIFF SGLLHLL+RF  +P  R TD  +S
Sbjct: 26  PPPQPKLDTDG-FNLSTRVSPSILLIIIILAIIFFVSGLLHLLVRFLSRPPNRETDDLES 85

Query: 74  TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQP 133
                  +A QGQL+QLFHLHDAGVDQ+FID LPVF YKAIIGLK +PFDC+VCLCEF+P
Sbjct: 86  V------TALQGQLQQLFHLHDAGVDQTFIDALPVFHYKAIIGLK-NPFDCAVCLCEFEP 145

Query: 134 NDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASN 193
            DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRA L+SDF+  N    SPIV VLES   
Sbjct: 146 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRACLLSDFSPNNS--CSPIVLVLESGGE 205

Query: 194 SSREI------------GEVHTGSFLGFLGD----------VSDFTELKTEEPPATGA-- 253
           SSREI              + T S L   GD              +E+ T++     +  
Sbjct: 206 SSREIVNDREADIGRTTSVLTTNSHLSCHGDNELGSSRLDISHKSSEILTKDDSVPDSAP 265

Query: 254 -------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIR 313
                  + VVP+KLGKF+N++ NGEGSS   NV SRRC+SMGSF YV+DENSSLQVP+R
Sbjct: 266 TIVVDSWDKVVPVKLGKFRNVD-NGEGSS-TINVDSRRCYSMGSFEYVLDENSSLQVPVR 325

Query: 314 TPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEEL--------SGRVESFRHGN 373
           TP ++KQ  KK  LPL  G R A+SECDCESRREF+ FE L        +  V S  +G 
Sbjct: 326 TP-MKKQSSKKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNGTASIVSSSGNGI 385

Query: 374 SKDSCE----EKVAGAGDRV---AVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRR 422
            +   E     K+   G +V   +  D SRRAFSF FP N+N     +G    DE+NQ  
Sbjct: 386 GRSKRESFSISKIWLRGKKVKQNSPEDSSRRAFSFRFPVNKN--VVADGQWGCDEQNQSC 445

[Close]

BLAST of Csa2G047810.1 vs. TrEMBL
Match: A0A067KRN7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04120 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.5e-105
Identity = 249/475 (52.42%), Postives = 291/475 (61.26%), Query Frame = 1


Query: 13  LPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDS 72
           LP P P   SD GFNL+N++SP++LL I+ILAIIFF SGLLHLL+RF  +P  R + E  
Sbjct: 23  LPQPPPHLDSDTGFNLNNKISPSVLLIIVILAIIFFVSGLLHLLVRFLLRPPNRENDELD 82

Query: 73  TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQP 132
                  +A QGQL+QLFHLHD+GVDQSFIDTLPVF YK+IIGLK +PFDC+VCLCEF+ 
Sbjct: 83  NV-----TALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLK-NPFDCAVCLCEFED 142

Query: 133 NDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASN 192
            DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCR SL+ DF++ N    SPIV VLES S 
Sbjct: 143 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPDFSSSNS--CSPIVLVLESGSE 202

Query: 193 SSREIG---EVHTG---------SFLGFLGD------------VSDFTELKTEEPP--AT 252
           SSREIG   E H G         S +GF G+             S    +K E  P    
Sbjct: 203 SSREIGIDRENHIGRSNSVLNSSSHVGFNGENELGSSSKEISYKSSEILIKEESLPKMVD 262

Query: 253 GAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVR 312
               VVP+KLGKF+N++  GEGSS NSNV  RRCFSMGSF YVMDEN+ L+V IRTP ++
Sbjct: 263 LGGKVVPVKLGKFRNVDI-GEGSS-NSNVDERRCFSMGSFEYVMDENTLLKVAIRTP-MK 322

Query: 313 KQVRKKKDLPLMLGSRAAISECDCESRREFNFEELSGRVES----------FRHGNSKDS 372
           KQ  KK  LPL  G R A+SECDCESRREF+  E    VES           R+GNSK  
Sbjct: 323 KQSSKKPSLPLTPGHRPAMSECDCESRREFHGFEGIRNVESNGNGNENSIVARNGNSKKE 382

Query: 373 C-----------EEKVAGAGDRVAVMDLSRRAFSFHFPANRN-----------------R 422
                       +EK   +GD       +RRAFSF FP N                   R
Sbjct: 383 SFSISKIWLRGEKEKNKPSGDS------TRRAFSFRFPVNNKNVGCGDDLKLKNGNVDAR 442

[Close]

BLAST of Csa2G047810.1 vs. TAIR10
Match: AT4G30400.1 (AT4G30400.1 RING/U-box superfamily protein)

HSP 1 Score: 315.8 bits (808), Expect = 4.0e-86
Identity = 208/462 (45.02%), Postives = 266/462 (57.58%), Query Frame = 1


Query: 9   SNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTD 68
           S+ P  PP    +S   F+L++++SP+ILL IIIL+IIFF SGLLHLL+RF   P  R D
Sbjct: 25  SSLPQEPPL-SLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR-D 84

Query: 69  PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLC 128
            ED        +A QGQL+QLFHLHD+GVDQSFIDTLPVF YK+IIGLK  PFDC+VCLC
Sbjct: 85  REDYF---DNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLC 144

Query: 129 EFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLE 188
           EF+  DKLRLL KCSHAFHMDCIDTWLL+HSTCPLCR+SL+SD ++     SS ++ VLE
Sbjct: 145 EFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLL-VLE 204

Query: 189 SAS-------------------NSSREIGEVHTG----SFLGFLGDVSDFTELKTEEPPA 248
           SAS                   N   ++   H G    + LG     S   +   +    
Sbjct: 205 SASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELG 264

Query: 249 TGAETVVP--IKLGKFKNLESNGEGSSNNSNVGS------RRCFSMGSFGYVMDENSSLQ 308
                VVP  +KLGKF+N++  GEG+S+N+N+G+      RRCFSMGS+ Y+MDE ++L+
Sbjct: 265 GSVGKVVPFSVKLGKFRNIDI-GEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLK 324

Query: 309 VPIRTPAVRKQVRKKKDLPLMLGSRAAISEC--DCESRREFNFEELSGRVESFRHGN--- 368
           V + T   +KQ  K + LP   G R A+SEC  D   R +F+       VE     N   
Sbjct: 325 VHVST---KKQSSKNRGLP---GHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVE 384

Query: 369 ------------SKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDE 422
                        K     KV G  D   V   S RAFSF     RN P +    G  +E
Sbjct: 385 RESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDAMIESGC-EE 444

[Close]

BLAST of Csa2G047810.1 vs. TAIR10
Match: AT2G18650.1 (AT2G18650.1 RING/U-box superfamily protein)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-74
Identity = 180/448 (40.18%), Postives = 251/448 (56.03%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           M +    IS+ P PP  P   +    NL+++++P ILL IIIL+IIFF SGLLH+L++F 
Sbjct: 8   MKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFL 67

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
             P  R   ED        +A QGQL+QLF+LHD+GVDQS IDTLPVF YK+I+GLK+ P
Sbjct: 68  LTPS-RESREDYF---DNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISP 127

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDC VCLCEF+  DKLRLL KCSHAFH++CIDTWLL+HSTCPLCR++L+S F++ +   S
Sbjct: 128 FDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSS-HHNLS 187

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGF-LGDVSDFTELKTEEPPATG-------AETVV 240
           S  + VLES  +S   +  + + S LG+ + + S+ T +++               E VV
Sbjct: 188 SSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVV 247

Query: 241 P--IKLGKFKNLESNGEG--------SSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRT 300
           P  +KLGKF+N++  GEG        S N+ NV  RRC SMGS+ Y+MD+ ++L+V + T
Sbjct: 248 PLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST 307

Query: 301 PAVRKQVRKKKDLPLMLGSRAAISECDCE-----------SRREFNFEE--LSGRVESFR 360
               K++  K  +P     R  +SEC  +            R  F+  +  L G+ E  +
Sbjct: 308 ----KKLSGKDRVP---SHRTVMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQK 367

Query: 361 HGNSKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRRNSLE 418
             +++DS    V+ +              S  FP +R  P         +E  +  NS  
Sbjct: 368 GTSARDSDCSFVSSS--------------SLRFPNHRIPP---------EESLKSENSES 419

[Close]

BLAST of Csa2G047810.1 vs. TAIR10
Match: AT5G40250.1 (AT5G40250.1 RING/U-box superfamily protein)

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-55
Identity = 137/335 (40.90%), Postives = 182/335 (54.33%), Query Frame = 1


Query: 3   TLSQPISNFPLPPP----------SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGL 62
           T+ Q   NF  PPP          SP   S G     N +SP +L  I+ILA++FF SGL
Sbjct: 7   TIEQKDGNFAYPPPFYKDPILSPPSPPPPSSG-----NRISPAVLFVIVILAVLFFISGL 66

Query: 63  LHLLLRFFHKPQIRTD-------PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTL 122
           LHLL+RF  K    T        PE ST+      A Q QL+QLFHL+D+G+DQ+FID L
Sbjct: 67  LHLLVRFLIKHPSATASSRSNRFPEISTS-----DALQRQLQQLFHLNDSGLDQAFIDAL 126

Query: 123 PVFLYKAIIG---------LKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLL 182
           PVF YK I+G            +PFDC+VCLCEF   DKLRLL  CSHAFH++CIDTWL 
Sbjct: 127 PVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ 186

Query: 183 THSTCPLCRASLVS-DFAAINGGFSSPIV-----GVLESASNSSREIGEVHTGSFLGFLG 242
           ++STCPLCR +L S  F+  N  F    +     GV E+ S  + EI E+          
Sbjct: 187 SNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTENGSQKTMEIQEI---------- 246

Query: 243 DVSDFTELKTEEPPATGAETVVPIKLGKFKNLES--NGE-------GSSNNSNVGSRRCF 294
                             + V+P++LGKFK L++  NG+       G +++SN+ +RRCF
Sbjct: 247 ---------------VVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCF 305

[Close]

BLAST of Csa2G047810.1 vs. TAIR10
Match: AT1G23980.1 (AT1G23980.1 RING/U-box superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 6.6e-49
Identity = 114/289 (39.45%), Postives = 155/289 (53.63%), Query Frame = 1


Query: 12  PLPPPSP--------DTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 71
           P   PSP        D+ S      +N +SP IL  I++L++IFF   +LHLL+R++ K 
Sbjct: 21  PSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 80

Query: 72  Q---IRTDPEDSTAGD--GGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 131
           +   + + P +S        +  +Q QL+QLFHLHD+G+DQ+ ID LPVFLYK I G K 
Sbjct: 81  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK- 140

Query: 132 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVS-------- 191
           +PFDC+VCLCEF  +DKLRLL  CSHAFH+DCIDTWLL++STCPLCR +L S        
Sbjct: 141 EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYP 200

Query: 192 -----DFAAINGGFSSPIVGVLESASNS-SREIGEVHTGSFLGFLGDVSDFTELKTEEPP 251
                 FA  +GG    +  V + A N   + +  V  G F                   
Sbjct: 201 DFNFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKF--------------RSSNI 260

Query: 252 ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDEN 274
               E VV             G G +++S++ +RRCFSMGS+ Y++ E+
Sbjct: 261 VNNGEVVV------------GGGGETSSSSLDNRRCFSMGSYQYIVAES 282

[Close]

BLAST of Csa2G047810.1 vs. TAIR10
Match: AT5G57750.1 (AT5G57750.1 RING/U-box superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-42
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1


Query: 17  SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDSTAGD 76
           S  + +D  F+L   +SP +LL I +L+IIFF + L+HLL++F H+PQ R D     A D
Sbjct: 17  SYSSSTDKDFDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDD----AYD 76

Query: 77  G---GASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPN 136
           G    ++A QG+ +  F+LHDA +DQSFID LP+  YK +IGL+ D  DC+VCL EF   
Sbjct: 77  GITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAE 136

Query: 137 DKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNS 196
           D+LRLL KCSHAFH++CIDTWLLT+STCPLCR +L+          SS IV V ES  ++
Sbjct: 137 DELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSSTIVLVHESDGDN 194

[Close]

BLAST of Csa2G047810.1 vs. NCBI nr
Match: gi|449462741|ref|XP_004149099.1| (PREDICTED: RING-H2 finger protein ATL13 [Cucumis sativus])

HSP 1 Score: 867.8 bits (2241), Expect = 7.6e-249
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF
Sbjct: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
           HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP
Sbjct: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS
Sbjct: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240
           SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK
Sbjct: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240

Query: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300
           NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG
Sbjct: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300

Query: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360
           SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF
Sbjct: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360

Query: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420
           HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP
Sbjct: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420

Query: 421 NDDDDHS 428
           NDDDDHS
Sbjct: 421 NDDDDHS 427

[Close]

BLAST of Csa2G047810.1 vs. NCBI nr
Match: gi|659069895|ref|XP_008452317.1| (PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo])

HSP 1 Score: 829.7 bits (2142), Expect = 2.3e-237
Identity = 408/427 (95.55%), Postives = 416/427 (97.42%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           MAT SQPISN  LPPPSP+TQSDGGFNLD+EVSPTILLAIIILAIIFFFSGLLHLLLRFF
Sbjct: 1   MATPSQPISNLSLPPPSPETQSDGGFNLDSEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
           HKPQIRTD EDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP
Sbjct: 61  HKPQIRTDLEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAI+GGFS
Sbjct: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGGFS 180

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240
           SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK
Sbjct: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240

Query: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300
           NLE NGEGSSNN NVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRK VRKKKDLPLMLG
Sbjct: 241 NLECNGEGSSNNGNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDLPLMLG 300

Query: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360
           SRAAISECDCESRR+FNFEELSGRVESFRHGNSKDSCEEKVAG GDR+ VMDL+RRAFSF
Sbjct: 301 SRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGTGDRLPVMDLTRRAFSF 360

Query: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420
           HFPANRNRPRSENGMG MDEENQRR+SLE VENRPSFVRRTLQWLMGKNNNRIVHSSFTP
Sbjct: 361 HFPANRNRPRSENGMGTMDEENQRRSSLEIVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420

Query: 421 NDDDDHS 428
           NDD+DHS
Sbjct: 421 NDDEDHS 427

[Close]

BLAST of Csa2G047810.1 vs. NCBI nr
Match: gi|567922962|ref|XP_006453487.1| (hypothetical protein CICLE_v10008104mg [Citrus clementina])

HSP 1 Score: 410.6 bits (1054), Expect = 3.3e-111
Identity = 259/491 (52.75%), Postives = 302/491 (61.51%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNLDN+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLDNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P D+LRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREIG-----------EVHTGSFLGFLGDVS------DFTELKTEEPPAT 244
           V VLES S SSREIG            + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIGGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 GA-----------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
            A           E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVMDENS 
Sbjct: 258 DAVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMDENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGSNISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810.1 vs. NCBI nr
Match: gi|641843470|gb|KDO62370.1| (hypothetical protein CISIN_1g042083mg [Citrus sinensis])

HSP 1 Score: 404.4 bits (1038), Expect = 2.4e-109
Identity = 256/491 (52.14%), Postives = 300/491 (61.10%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNL+N+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREI-----------GEVHTGSFLGFLGDVS------DFTELKTEEPP-- 244
           V VLES S SSREI             + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIAGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 ---------ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
                        E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVM+ENS 
Sbjct: 258 DVVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMEENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGANISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810.1 vs. NCBI nr
Match: gi|566215213|ref|XP_002324500.2| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-107
Identity = 247/456 (54.17%), Postives = 293/456 (64.25%), Query Frame = 1


Query: 14  PPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIR-TDPEDS 73
           PPP P   +DG FNL   VSP+ILL IIILAIIFF SGLLHLL+RF  +P  R TD  +S
Sbjct: 26  PPPQPKLDTDG-FNLSTRVSPSILLIIIILAIIFFVSGLLHLLVRFLSRPPNRETDDLES 85

Query: 74  TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQP 133
                  +A QGQL+QLFHLHDAGVDQ+FID LPVF YKAIIGLK +PFDC+VCLCEF+P
Sbjct: 86  V------TALQGQLQQLFHLHDAGVDQTFIDALPVFHYKAIIGLK-NPFDCAVCLCEFEP 145

Query: 134 NDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASN 193
            DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRA L+SDF+  N    SPIV VLES   
Sbjct: 146 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRACLLSDFSPNNS--CSPIVLVLESGGE 205

Query: 194 SSREI------------GEVHTGSFLGFLGD----------VSDFTELKTEEPPATGA-- 253
           SSREI              + T S L   GD              +E+ T++     +  
Sbjct: 206 SSREIVNDREADIGRTTSVLTTNSHLSCHGDNELGSSRLDISHKSSEILTKDDSVPDSAP 265

Query: 254 -------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIR 313
                  + VVP+KLGKF+N++ NGEGSS   NV SRRC+SMGSF YV+DENSSLQVP+R
Sbjct: 266 TIVVDSWDKVVPVKLGKFRNVD-NGEGSS-TINVDSRRCYSMGSFEYVLDENSSLQVPVR 325

Query: 314 TPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEEL--------SGRVESFRHGN 373
           TP ++KQ  KK  LPL  G R A+SECDCESRREF+ FE L        +  V S  +G 
Sbjct: 326 TP-MKKQSSKKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNGTASIVSSSGNGI 385

Query: 374 SKDSCE----EKVAGAGDRV---AVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRR 422
            +   E     K+   G +V   +  D SRRAFSF FP N+N     +G    DE+NQ  
Sbjct: 386 GRSKRESFSISKIWLRGKKVKQNSPEDSSRRAFSFRFPVNKN--VVADGQWGCDEQNQSC 445

The following BLAST results are available for this feature:

BLAST of Csa2G047810.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL13_ARATH	7.0e-85	45.02	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2	[more]
ATL49_ARATH	2.1e-73	40.18	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1	[more]
ATL46_ARATH	6.4e-54	40.90	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1	[more]
ATL47_ARATH	1.2e-47	39.45	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1	[more]
ATL50_ARATH	3.6e-41	50.27	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana GN=ATL50 PE=3 SV=1	[more]

BLAST of Csa2G047810.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH59_CUCSA	5.3e-249	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G047810 PE=4 SV=1	[more]
V4UKQ9_9ROSI	2.3e-111	52.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008104mg PE=4 SV=1	[more]
A0A067F897_CITSI	1.7e-109	52.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042083mg PE=4 SV=1	[more]
B9IM58_POPTR	1.2e-107	54.17	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0018s10760g PE=4 SV=2	[more]
A0A067KRN7_JATCU	1.5e-105	52.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04120 PE=4 SV=1	[more]

BLAST of Csa2G047810.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30400.1	4.0e-86	45.02	RING/U-box superfamily protein	[more]
AT2G18650.1	1.2e-74	40.18	RING/U-box superfamily protein	[more]
AT5G40250.1	3.6e-55	40.90	RING/U-box superfamily protein	[more]
AT1G23980.1	6.6e-49	39.45	RING/U-box superfamily protein	[more]
AT5G57750.1	2.1e-42	50.27	RING/U-box superfamily protein	[more]

BLAST of Csa2G047810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462741\|ref\|XP_004149099.1\|	7.6e-249	100.00	PREDICTED: RING-H2 finger protein ATL13 [Cucumis sativus]	[more]
gi\|659069895\|ref\|XP_008452317.1\|	2.3e-237	95.55	PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo]	[more]
gi\|567922962\|ref\|XP_006453487.1\|	3.3e-111	52.75	hypothetical protein CICLE_v10008104mg [Citrus clementina]	[more]
gi\|641843470\|gb\|KDO62370.1\|	2.4e-109	52.14	hypothetical protein CISIN_1g042083mg [Citrus sinensis]	[more]
gi\|566215213\|ref\|XP_002324500.2\|	1.7e-107	54.17	zinc finger family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa2G047810	Csa2G047810	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa2G047810.1	Csa2G047810.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G047810.1.utr5p1	Csa2G047810.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G047810.1.cds1	Csa2G047810.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G047810.1.utr3p1	Csa2G047810.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 122..165 score: 3.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 123..164 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 123..165 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 122..168 score: 6.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 12..192 score: 8.6
None	No IPR available	PANTHER	PTHR14155:SF80	RING-H2 FINGER PROTEIN ATL13-RELATED	coord: 12..192 score: 8.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 105..171 score: 1.21