Csa2G047810 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G047810
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ring finger protein, putative; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr2 : 3999146 .. 4000582 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAATTCCATTTTCTTTCTCAACCTTCAAACATACATCCATGGCTACTCTCTCTCAACCCATTTCTAATTTTCCTCTTCCACCGCCGTCACCGGATACCCAATCCGACGGCGGTTTTAATTTAGACAACGAAGTAAGTCCCACAATTCTCTTAGCCATAATCATCCTCGCCATTATCTTTTTCTTCTCCGGCCTCCTCCACCTTCTCCTCCGATTCTTCCACAAACCCCAAATCAGAACTGACCCAGAAGATTCCACTGCCGGCGACGGCGGTGCCTCTGCTTTCCAAGGTCAACTCCGGCAGCTGTTTCACCTCCATGACGCCGGCGTTGACCAATCCTTCATCGATACACTCCCTGTTTTTCTTTATAAAGCCATAATCGGCTTGAAATTAGACCCATTTGATTGCTCTGTTTGTCTCTGTGAATTTCAGCCTAATGATAAGCTTCGATTATTGACGAAATGCAGCCATGCTTTTCATATGGATTGCATAGACACTTGGCTTTTGACTCATTCTACTTGTCCTCTCTGTCGTGCGAGCTTGGTTTCTGATTTCGCTGCCATTAATGGCGGATTCTCGTCTCCAATTGTTGGAGTTCTTGAATCTGCAAGTAATAGTTCGAGAGAAATTGGGGAAGTTCACACCGGTTCGTTTCTTGGTTTTCTTGGGGATGTGTCGGATTTTACTGAATTGAAAACAGAGGAACCTCCGGCAACGGGAGCAGAGACGGTGGTTCCGATTAAATTAGGGAAGTTTAAGAATTTGGAGAGTAATGGAGAAGGGAGTAGTAATAATAGCAATGTGGGTTCGAGGAGGTGTTTTTCAATGGGGTCTTTTGGGTATGTAATGGATGAAAATTCGTCTCTTCAAGTTCCCATCAGGACGCCGGCGGTGAGGAAACAGGTGAGGAAGAAGAAGGATCTGCCATTGATGCTCGGGAGCAGAGCGGCAATATCTGAATGCGATTGCGAATCAAGAAGAGAGTTTAATTTTGAGGAATTGAGTGGGAGAGTTGAGAGTTTCCGCCATGGGAACTCGAAGGACAGCTGTGAAGAGAAGGTAGCCGGCGCCGGTGACAGAGTGGCGGTGATGGATTTGTCTAGAAGGGCGTTTTCGTTTCATTTTCCTGCGAATCGGAACCGACCCAGATCGGAAAATGGGATGGGAATGATGGATGAAGAGAATCAGAGAAGAAACAGTTTGGAATTTGTTGAGAATCGGCCGTCGTTTGTGAGAAGAACGTTACAGTGGCTGATGGGAAAGAACAACAATAGGATTGTTCATTCATCTTTTACACCTAATGATGATGATGATCATTCTTGATTTTTTTTCTTTTCTTTCTTTTGAGATTTTGAGTAACTTTTAATGGGGATTTCAAATTTGAGTGCAGAAATTATAAAAATTCAAAACTCAAAAGAATTAGAAAATGTCGAT

mRNA sequence

ATGGCTACTCTCTCTCAACCCATTTCTAATTTTCCTCTTCCACCGCCGTCACCGGATACCCAATCCGACGGCGGTTTTAATTTAGACAACGAAGTAAGTCCCACAATTCTCTTAGCCATAATCATCCTCGCCATTATCTTTTTCTTCTCCGGCCTCCTCCACCTTCTCCTCCGATTCTTCCACAAACCCCAAATCAGAACTGACCCAGAAGATTCCACTGCCGGCGACGGCGGTGCCTCTGCTTTCCAAGGTCAACTCCGGCAGCTGTTTCACCTCCATGACGCCGGCGTTGACCAATCCTTCATCGATACACTCCCTGTTTTTCTTTATAAAGCCATAATCGGCTTGAAATTAGACCCATTTGATTGCTCTGTTTGTCTCTGTGAATTTCAGCCTAATGATAAGCTTCGATTATTGACGAAATGCAGCCATGCTTTTCATATGGATTGCATAGACACTTGGCTTTTGACTCATTCTACTTGTCCTCTCTGTCGTGCGAGCTTGGTTTCTGATTTCGCTGCCATTAATGGCGGATTCTCGTCTCCAATTGTTGGAGTTCTTGAATCTGCAAGTAATAGTTCGAGAGAAATTGGGGAAGTTCACACCGGTTCGTTTCTTGGTTTTCTTGGGGATGTGTCGGATTTTACTGAATTGAAAACAGAGGAACCTCCGGCAACGGGAGCAGAGACGGTGGTTCCGATTAAATTAGGGAAGTTTAAGAATTTGGAGAGTAATGGAGAAGGGAGTAGTAATAATAGCAATGTGGGTTCGAGGAGGTGTTTTTCAATGGGGTCTTTTGGGTATGTAATGGATGAAAATTCGTCTCTTCAAGTTCCCATCAGGACGCCGGCGGTGAGGAAACAGGTGAGGAAGAAGAAGGATCTGCCATTGATGCTCGGGAGCAGAGCGGCAATATCTGAATGCGATTGCGAATCAAGAAGAGAGTTTAATTTTGAGGAATTGAGTGGGAGAGTTGAGAGTTTCCGCCATGGGAACTCGAAGGACAGCTGTGAAGAGAAGGTAGCCGGCGCCGGTGACAGAGTGGCGGTGATGGATTTGTCTAGAAGGGCGTTTTCGTTTCATTTTCCTGCGAATCGGAACCGACCCAGATCGGAAAATGGGATGGGAATGATGGATGAAGAGAATCAGAGAAGAAACAGTTTGGAATTTGTTGAGAATCGGCCGTCGTTTGTGAGAAGAACGTTACAGTGGCTGATGGGAAAGAACAACAATAGGATTGTTCATTCATCTTTTACACCTAATGATGATGATGATCATTCTTGA

Coding sequence (CDS)

ATGGCTACTCTCTCTCAACCCATTTCTAATTTTCCTCTTCCACCGCCGTCACCGGATACCCAATCCGACGGCGGTTTTAATTTAGACAACGAAGTAAGTCCCACAATTCTCTTAGCCATAATCATCCTCGCCATTATCTTTTTCTTCTCCGGCCTCCTCCACCTTCTCCTCCGATTCTTCCACAAACCCCAAATCAGAACTGACCCAGAAGATTCCACTGCCGGCGACGGCGGTGCCTCTGCTTTCCAAGGTCAACTCCGGCAGCTGTTTCACCTCCATGACGCCGGCGTTGACCAATCCTTCATCGATACACTCCCTGTTTTTCTTTATAAAGCCATAATCGGCTTGAAATTAGACCCATTTGATTGCTCTGTTTGTCTCTGTGAATTTCAGCCTAATGATAAGCTTCGATTATTGACGAAATGCAGCCATGCTTTTCATATGGATTGCATAGACACTTGGCTTTTGACTCATTCTACTTGTCCTCTCTGTCGTGCGAGCTTGGTTTCTGATTTCGCTGCCATTAATGGCGGATTCTCGTCTCCAATTGTTGGAGTTCTTGAATCTGCAAGTAATAGTTCGAGAGAAATTGGGGAAGTTCACACCGGTTCGTTTCTTGGTTTTCTTGGGGATGTGTCGGATTTTACTGAATTGAAAACAGAGGAACCTCCGGCAACGGGAGCAGAGACGGTGGTTCCGATTAAATTAGGGAAGTTTAAGAATTTGGAGAGTAATGGAGAAGGGAGTAGTAATAATAGCAATGTGGGTTCGAGGAGGTGTTTTTCAATGGGGTCTTTTGGGTATGTAATGGATGAAAATTCGTCTCTTCAAGTTCCCATCAGGACGCCGGCGGTGAGGAAACAGGTGAGGAAGAAGAAGGATCTGCCATTGATGCTCGGGAGCAGAGCGGCAATATCTGAATGCGATTGCGAATCAAGAAGAGAGTTTAATTTTGAGGAATTGAGTGGGAGAGTTGAGAGTTTCCGCCATGGGAACTCGAAGGACAGCTGTGAAGAGAAGGTAGCCGGCGCCGGTGACAGAGTGGCGGTGATGGATTTGTCTAGAAGGGCGTTTTCGTTTCATTTTCCTGCGAATCGGAACCGACCCAGATCGGAAAATGGGATGGGAATGATGGATGAAGAGAATCAGAGAAGAAACAGTTTGGAATTTGTTGAGAATCGGCCGTCGTTTGTGAGAAGAACGTTACAGTGGCTGATGGGAAAGAACAACAATAGGATTGTTCATTCATCTTTTACACCTAATGATGATGATGATCATTCTTGA

Protein sequence

MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTPNDDDDHS*

Homology

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BLAST of Csa2G047810 vs. Swiss-Prot
Match: ATL13_ARATH (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 7.0e-85
Identity = 208/462 (45.02%), Postives = 266/462 (57.58%), Query Frame = 1


Query: 9   SNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTD 68
           S+ P  PP    +S   F+L++++SP+ILL IIIL+IIFF SGLLHLL+RF   P  R D
Sbjct: 25  SSLPQEPPL-SLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR-D 84

Query: 69  PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLC 128
            ED        +A QGQL+QLFHLHD+GVDQSFIDTLPVF YK+IIGLK  PFDC+VCLC
Sbjct: 85  REDYF---DNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLC 144

Query: 129 EFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLE 188
           EF+  DKLRLL KCSHAFHMDCIDTWLL+HSTCPLCR+SL+SD ++     SS ++ VLE
Sbjct: 145 EFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLL-VLE 204

Query: 189 SAS-------------------NSSREIGEVHTG----SFLGFLGDVSDFTELKTEEPPA 248
           SAS                   N   ++   H G    + LG     S   +   +    
Sbjct: 205 SASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELG 264

Query: 249 TGAETVVP--IKLGKFKNLESNGEGSSNNSNVGS------RRCFSMGSFGYVMDENSSLQ 308
                VVP  +KLGKF+N++  GEG+S+N+N+G+      RRCFSMGS+ Y+MDE ++L+
Sbjct: 265 GSVGKVVPFSVKLGKFRNIDI-GEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLK 324

Query: 309 VPIRTPAVRKQVRKKKDLPLMLGSRAAISEC--DCESRREFNFEELSGRVESFRHGN--- 368
           V + T   +KQ  K + LP   G R A+SEC  D   R +F+       VE     N   
Sbjct: 325 VHVST---KKQSSKNRGLP---GHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVE 384

Query: 369 ------------SKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDE 422
                        K     KV G  D   V   S RAFSF     RN P +    G  +E
Sbjct: 385 RESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDAMIESGC-EE 444

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BLAST of Csa2G047810 vs. Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.1e-73
Identity = 180/448 (40.18%), Postives = 251/448 (56.03%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           M +    IS+ P PP  P   +    NL+++++P ILL IIIL+IIFF SGLLH+L++F 
Sbjct: 8   MKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFL 67

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
             P  R   ED        +A QGQL+QLF+LHD+GVDQS IDTLPVF YK+I+GLK+ P
Sbjct: 68  LTPS-RESREDYF---DNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISP 127

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDC VCLCEF+  DKLRLL KCSHAFH++CIDTWLL+HSTCPLCR++L+S F++ +   S
Sbjct: 128 FDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSS-HHNLS 187

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGF-LGDVSDFTELKTEEPPATG-------AETVV 240
           S  + VLES  +S   +  + + S LG+ + + S+ T +++               E VV
Sbjct: 188 SSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVV 247

Query: 241 P--IKLGKFKNLESNGEG--------SSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRT 300
           P  +KLGKF+N++  GEG        S N+ NV  RRC SMGS+ Y+MD+ ++L+V + T
Sbjct: 248 PLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST 307

Query: 301 PAVRKQVRKKKDLPLMLGSRAAISECDCE-----------SRREFNFEE--LSGRVESFR 360
               K++  K  +P     R  +SEC  +            R  F+  +  L G+ E  +
Sbjct: 308 ----KKLSGKDRVP---SHRTVMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQK 367

Query: 361 HGNSKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRRNSLE 418
             +++DS    V+ +              S  FP +R  P         +E  +  NS  
Sbjct: 368 GTSARDSDCSFVSSS--------------SLRFPNHRIPP---------EESLKSENSES 419

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BLAST of Csa2G047810 vs. Swiss-Prot
Match: ATL46_ARATH (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.4e-54
Identity = 137/335 (40.90%), Postives = 182/335 (54.33%), Query Frame = 1


Query: 3   TLSQPISNFPLPPP----------SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGL 62
           T+ Q   NF  PPP          SP   S G     N +SP +L  I+ILA++FF SGL
Sbjct: 7   TIEQKDGNFAYPPPFYKDPILSPPSPPPPSSG-----NRISPAVLFVIVILAVLFFISGL 66

Query: 63  LHLLLRFFHKPQIRTD-------PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTL 122
           LHLL+RF  K    T        PE ST+      A Q QL+QLFHL+D+G+DQ+FID L
Sbjct: 67  LHLLVRFLIKHPSATASSRSNRFPEISTS-----DALQRQLQQLFHLNDSGLDQAFIDAL 126

Query: 123 PVFLYKAIIG---------LKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLL 182
           PVF YK I+G            +PFDC+VCLCEF   DKLRLL  CSHAFH++CIDTWL 
Sbjct: 127 PVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ 186

Query: 183 THSTCPLCRASLVS-DFAAINGGFSSPIV-----GVLESASNSSREIGEVHTGSFLGFLG 242
           ++STCPLCR +L S  F+  N  F    +     GV E+ S  + EI E+          
Sbjct: 187 SNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTENGSQKTMEIQEI---------- 246

Query: 243 DVSDFTELKTEEPPATGAETVVPIKLGKFKNLES--NGE-------GSSNNSNVGSRRCF 294
                             + V+P++LGKFK L++  NG+       G +++SN+ +RRCF
Sbjct: 247 ---------------VVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCF 305

[Close]

BLAST of Csa2G047810 vs. Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-47
Identity = 114/289 (39.45%), Postives = 155/289 (53.63%), Query Frame = 1


Query: 12  PLPPPSP--------DTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 71
           P   PSP        D+ S      +N +SP IL  I++L++IFF   +LHLL+R++ K 
Sbjct: 21  PSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 80

Query: 72  Q---IRTDPEDSTAGD--GGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 131
           +   + + P +S        +  +Q QL+QLFHLHD+G+DQ+ ID LPVFLYK I G K 
Sbjct: 81  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK- 140

Query: 132 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVS-------- 191
           +PFDC+VCLCEF  +DKLRLL  CSHAFH+DCIDTWLL++STCPLCR +L S        
Sbjct: 141 EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYP 200

Query: 192 -----DFAAINGGFSSPIVGVLESASNS-SREIGEVHTGSFLGFLGDVSDFTELKTEEPP 251
                 FA  +GG    +  V + A N   + +  V  G F                   
Sbjct: 201 DFNFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKF--------------RSSNI 260

Query: 252 ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDEN 274
               E VV             G G +++S++ +RRCFSMGS+ Y++ E+
Sbjct: 261 VNNGEVVV------------GGGGETSSSSLDNRRCFSMGSYQYIVAES 282

[Close]

BLAST of Csa2G047810 vs. Swiss-Prot
Match: ATL50_ARATH (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana GN=ATL50 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.6e-41
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1


Query: 17  SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDSTAGD 76
           S  + +D  F+L   +SP +LL I +L+IIFF + L+HLL++F H+PQ R D     A D
Sbjct: 17  SYSSSTDKDFDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDD----AYD 76

Query: 77  G---GASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPN 136
           G    ++A QG+ +  F+LHDA +DQSFID LP+  YK +IGL+ D  DC+VCL EF   
Sbjct: 77  GITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAE 136

Query: 137 DKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNS 196
           D+LRLL KCSHAFH++CIDTWLLT+STCPLCR +L+          SS IV V ES  ++
Sbjct: 137 DELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSSTIVLVHESDGDN 194

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BLAST of Csa2G047810 vs. TrEMBL
Match: A0A0A0LH59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G047810 PE=4 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 5.3e-249
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF
Sbjct: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
           HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP
Sbjct: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS
Sbjct: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240
           SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK
Sbjct: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240

Query: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300
           NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG
Sbjct: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300

Query: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360
           SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF
Sbjct: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360

Query: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420
           HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP
Sbjct: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420

Query: 421 NDDDDHS 428
           NDDDDHS
Sbjct: 421 NDDDDHS 427

[Close]

BLAST of Csa2G047810 vs. TrEMBL
Match: V4UKQ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008104mg PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.3e-111
Identity = 259/491 (52.75%), Postives = 302/491 (61.51%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNLDN+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLDNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P D+LRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREIG-----------EVHTGSFLGFLGDVS------DFTELKTEEPPAT 244
           V VLES S SSREIG            + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIGGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 GA-----------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
            A           E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVMDENS 
Sbjct: 258 DAVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMDENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGSNISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810 vs. TrEMBL
Match: A0A067F897_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042083mg PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.7e-109
Identity = 256/491 (52.14%), Postives = 300/491 (61.10%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNL+N+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREI-----------GEVHTGSFLGFLGDVS------DFTELKTEEPP-- 244
           V VLES S SSREI             + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIAGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 ---------ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
                        E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVM+ENS 
Sbjct: 258 DVVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMEENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGANISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810 vs. TrEMBL
Match: B9IM58_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0018s10760g PE=4 SV=2)

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 247/456 (54.17%), Postives = 293/456 (64.25%), Query Frame = 1


Query: 14  PPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIR-TDPEDS 73
           PPP P   +DG FNL   VSP+ILL IIILAIIFF SGLLHLL+RF  +P  R TD  +S
Sbjct: 26  PPPQPKLDTDG-FNLSTRVSPSILLIIIILAIIFFVSGLLHLLVRFLSRPPNRETDDLES 85

Query: 74  TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQP 133
                  +A QGQL+QLFHLHDAGVDQ+FID LPVF YKAIIGLK +PFDC+VCLCEF+P
Sbjct: 86  V------TALQGQLQQLFHLHDAGVDQTFIDALPVFHYKAIIGLK-NPFDCAVCLCEFEP 145

Query: 134 NDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASN 193
            DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRA L+SDF+  N    SPIV VLES   
Sbjct: 146 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRACLLSDFSPNNS--CSPIVLVLESGGE 205

Query: 194 SSREI------------GEVHTGSFLGFLGD----------VSDFTELKTEEPPATGA-- 253
           SSREI              + T S L   GD              +E+ T++     +  
Sbjct: 206 SSREIVNDREADIGRTTSVLTTNSHLSCHGDNELGSSRLDISHKSSEILTKDDSVPDSAP 265

Query: 254 -------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIR 313
                  + VVP+KLGKF+N++ NGEGSS   NV SRRC+SMGSF YV+DENSSLQVP+R
Sbjct: 266 TIVVDSWDKVVPVKLGKFRNVD-NGEGSS-TINVDSRRCYSMGSFEYVLDENSSLQVPVR 325

Query: 314 TPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEEL--------SGRVESFRHGN 373
           TP ++KQ  KK  LPL  G R A+SECDCESRREF+ FE L        +  V S  +G 
Sbjct: 326 TP-MKKQSSKKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNGTASIVSSSGNGI 385

Query: 374 SKDSCE----EKVAGAGDRV---AVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRR 422
            +   E     K+   G +V   +  D SRRAFSF FP N+N     +G    DE+NQ  
Sbjct: 386 GRSKRESFSISKIWLRGKKVKQNSPEDSSRRAFSFRFPVNKN--VVADGQWGCDEQNQSC 445

[Close]

BLAST of Csa2G047810 vs. TrEMBL
Match: A0A067KRN7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04120 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.5e-105
Identity = 249/475 (52.42%), Postives = 291/475 (61.26%), Query Frame = 1


Query: 13  LPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDS 72
           LP P P   SD GFNL+N++SP++LL I+ILAIIFF SGLLHLL+RF  +P  R + E  
Sbjct: 23  LPQPPPHLDSDTGFNLNNKISPSVLLIIVILAIIFFVSGLLHLLVRFLLRPPNRENDELD 82

Query: 73  TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQP 132
                  +A QGQL+QLFHLHD+GVDQSFIDTLPVF YK+IIGLK +PFDC+VCLCEF+ 
Sbjct: 83  NV-----TALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLK-NPFDCAVCLCEFED 142

Query: 133 NDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASN 192
            DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCR SL+ DF++ N    SPIV VLES S 
Sbjct: 143 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPDFSSSNS--CSPIVLVLESGSE 202

Query: 193 SSREIG---EVHTG---------SFLGFLGD------------VSDFTELKTEEPP--AT 252
           SSREIG   E H G         S +GF G+             S    +K E  P    
Sbjct: 203 SSREIGIDRENHIGRSNSVLNSSSHVGFNGENELGSSSKEISYKSSEILIKEESLPKMVD 262

Query: 253 GAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVR 312
               VVP+KLGKF+N++  GEGSS NSNV  RRCFSMGSF YVMDEN+ L+V IRTP ++
Sbjct: 263 LGGKVVPVKLGKFRNVDI-GEGSS-NSNVDERRCFSMGSFEYVMDENTLLKVAIRTP-MK 322

Query: 313 KQVRKKKDLPLMLGSRAAISECDCESRREFNFEELSGRVES----------FRHGNSKDS 372
           KQ  KK  LPL  G R A+SECDCESRREF+  E    VES           R+GNSK  
Sbjct: 323 KQSSKKPSLPLTPGHRPAMSECDCESRREFHGFEGIRNVESNGNGNENSIVARNGNSKKE 382

Query: 373 C-----------EEKVAGAGDRVAVMDLSRRAFSFHFPANRN-----------------R 422
                       +EK   +GD       +RRAFSF FP N                   R
Sbjct: 383 SFSISKIWLRGEKEKNKPSGDS------TRRAFSFRFPVNNKNVGCGDDLKLKNGNVDAR 442

[Close]

BLAST of Csa2G047810 vs. TAIR10
Match: AT4G30400.1 (AT4G30400.1 RING/U-box superfamily protein)

HSP 1 Score: 315.8 bits (808), Expect = 4.0e-86
Identity = 208/462 (45.02%), Postives = 266/462 (57.58%), Query Frame = 1


Query: 9   SNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTD 68
           S+ P  PP    +S   F+L++++SP+ILL IIIL+IIFF SGLLHLL+RF   P  R D
Sbjct: 25  SSLPQEPPL-SLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR-D 84

Query: 69  PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLC 128
            ED        +A QGQL+QLFHLHD+GVDQSFIDTLPVF YK+IIGLK  PFDC+VCLC
Sbjct: 85  REDYF---DNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLC 144

Query: 129 EFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLE 188
           EF+  DKLRLL KCSHAFHMDCIDTWLL+HSTCPLCR+SL+SD ++     SS ++ VLE
Sbjct: 145 EFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLL-VLE 204

Query: 189 SAS-------------------NSSREIGEVHTG----SFLGFLGDVSDFTELKTEEPPA 248
           SAS                   N   ++   H G    + LG     S   +   +    
Sbjct: 205 SASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELG 264

Query: 249 TGAETVVP--IKLGKFKNLESNGEGSSNNSNVGS------RRCFSMGSFGYVMDENSSLQ 308
                VVP  +KLGKF+N++  GEG+S+N+N+G+      RRCFSMGS+ Y+MDE ++L+
Sbjct: 265 GSVGKVVPFSVKLGKFRNIDI-GEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLK 324

Query: 309 VPIRTPAVRKQVRKKKDLPLMLGSRAAISEC--DCESRREFNFEELSGRVESFRHGN--- 368
           V + T   +KQ  K + LP   G R A+SEC  D   R +F+       VE     N   
Sbjct: 325 VHVST---KKQSSKNRGLP---GHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVE 384

Query: 369 ------------SKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDE 422
                        K     KV G  D   V   S RAFSF     RN P +    G  +E
Sbjct: 385 RESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDAMIESGC-EE 444

[Close]

BLAST of Csa2G047810 vs. TAIR10
Match: AT2G18650.1 (AT2G18650.1 RING/U-box superfamily protein)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-74
Identity = 180/448 (40.18%), Postives = 251/448 (56.03%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           M +    IS+ P PP  P   +    NL+++++P ILL IIIL+IIFF SGLLH+L++F 
Sbjct: 8   MKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFL 67

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
             P  R   ED        +A QGQL+QLF+LHD+GVDQS IDTLPVF YK+I+GLK+ P
Sbjct: 68  LTPS-RESREDYF---DNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISP 127

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDC VCLCEF+  DKLRLL KCSHAFH++CIDTWLL+HSTCPLCR++L+S F++ +   S
Sbjct: 128 FDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSS-HHNLS 187

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGF-LGDVSDFTELKTEEPPATG-------AETVV 240
           S  + VLES  +S   +  + + S LG+ + + S+ T +++               E VV
Sbjct: 188 SSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVV 247

Query: 241 P--IKLGKFKNLESNGEG--------SSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRT 300
           P  +KLGKF+N++  GEG        S N+ NV  RRC SMGS+ Y+MD+ ++L+V + T
Sbjct: 248 PLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST 307

Query: 301 PAVRKQVRKKKDLPLMLGSRAAISECDCE-----------SRREFNFEE--LSGRVESFR 360
               K++  K  +P     R  +SEC  +            R  F+  +  L G+ E  +
Sbjct: 308 ----KKLSGKDRVP---SHRTVMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQK 367

Query: 361 HGNSKDSCEEKVAGAGDRVAVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRRNSLE 418
             +++DS    V+ +              S  FP +R  P         +E  +  NS  
Sbjct: 368 GTSARDSDCSFVSSS--------------SLRFPNHRIPP---------EESLKSENSES 419

[Close]

BLAST of Csa2G047810 vs. TAIR10
Match: AT5G40250.1 (AT5G40250.1 RING/U-box superfamily protein)

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-55
Identity = 137/335 (40.90%), Postives = 182/335 (54.33%), Query Frame = 1


Query: 3   TLSQPISNFPLPPP----------SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGL 62
           T+ Q   NF  PPP          SP   S G     N +SP +L  I+ILA++FF SGL
Sbjct: 7   TIEQKDGNFAYPPPFYKDPILSPPSPPPPSSG-----NRISPAVLFVIVILAVLFFISGL 66

Query: 63  LHLLLRFFHKPQIRTD-------PEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTL 122
           LHLL+RF  K    T        PE ST+      A Q QL+QLFHL+D+G+DQ+FID L
Sbjct: 67  LHLLVRFLIKHPSATASSRSNRFPEISTS-----DALQRQLQQLFHLNDSGLDQAFIDAL 126

Query: 123 PVFLYKAIIG---------LKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLL 182
           PVF YK I+G            +PFDC+VCLCEF   DKLRLL  CSHAFH++CIDTWL 
Sbjct: 127 PVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ 186

Query: 183 THSTCPLCRASLVS-DFAAINGGFSSPIV-----GVLESASNSSREIGEVHTGSFLGFLG 242
           ++STCPLCR +L S  F+  N  F    +     GV E+ S  + EI E+          
Sbjct: 187 SNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTENGSQKTMEIQEI---------- 246

Query: 243 DVSDFTELKTEEPPATGAETVVPIKLGKFKNLES--NGE-------GSSNNSNVGSRRCF 294
                             + V+P++LGKFK L++  NG+       G +++SN+ +RRCF
Sbjct: 247 ---------------VVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCF 305

[Close]

BLAST of Csa2G047810 vs. TAIR10
Match: AT1G23980.1 (AT1G23980.1 RING/U-box superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 6.6e-49
Identity = 114/289 (39.45%), Postives = 155/289 (53.63%), Query Frame = 1


Query: 12  PLPPPSP--------DTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 71
           P   PSP        D+ S      +N +SP IL  I++L++IFF   +LHLL+R++ K 
Sbjct: 21  PSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 80

Query: 72  Q---IRTDPEDSTAGD--GGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 131
           +   + + P +S        +  +Q QL+QLFHLHD+G+DQ+ ID LPVFLYK I G K 
Sbjct: 81  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK- 140

Query: 132 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVS-------- 191
           +PFDC+VCLCEF  +DKLRLL  CSHAFH+DCIDTWLL++STCPLCR +L S        
Sbjct: 141 EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYP 200

Query: 192 -----DFAAINGGFSSPIVGVLESASNS-SREIGEVHTGSFLGFLGDVSDFTELKTEEPP 251
                 FA  +GG    +  V + A N   + +  V  G F                   
Sbjct: 201 DFNFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKF--------------RSSNI 260

Query: 252 ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDEN 274
               E VV             G G +++S++ +RRCFSMGS+ Y++ E+
Sbjct: 261 VNNGEVVV------------GGGGETSSSSLDNRRCFSMGSYQYIVAES 282

[Close]

BLAST of Csa2G047810 vs. TAIR10
Match: AT5G57750.1 (AT5G57750.1 RING/U-box superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-42
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1


Query: 17  SPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIRTDPEDSTAGD 76
           S  + +D  F+L   +SP +LL I +L+IIFF + L+HLL++F H+PQ R D     A D
Sbjct: 17  SYSSSTDKDFDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDD----AYD 76

Query: 77  G---GASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPN 136
           G    ++A QG+ +  F+LHDA +DQSFID LP+  YK +IGL+ D  DC+VCL EF   
Sbjct: 77  GITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAE 136

Query: 137 DKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNS 196
           D+LRLL KCSHAFH++CIDTWLLT+STCPLCR +L+          SS IV V ES  ++
Sbjct: 137 DELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSSTIVLVHESDGDN 194

[Close]

BLAST of Csa2G047810 vs. NCBI nr
Match: gi|449462741|ref|XP_004149099.1| (PREDICTED: RING-H2 finger protein ATL13 [Cucumis sativus])

HSP 1 Score: 867.8 bits (2241), Expect = 7.6e-249
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF
Sbjct: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
           HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP
Sbjct: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS
Sbjct: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240
           SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK
Sbjct: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240

Query: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300
           NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG
Sbjct: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300

Query: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360
           SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF
Sbjct: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360

Query: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420
           HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP
Sbjct: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420

Query: 421 NDDDDHS 428
           NDDDDHS
Sbjct: 421 NDDDDHS 427

[Close]

BLAST of Csa2G047810 vs. NCBI nr
Match: gi|659069895|ref|XP_008452317.1| (PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo])

HSP 1 Score: 829.7 bits (2142), Expect = 2.3e-237
Identity = 408/427 (95.55%), Postives = 416/427 (97.42%), Query Frame = 1


Query: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60
           MAT SQPISN  LPPPSP+TQSDGGFNLD+EVSPTILLAIIILAIIFFFSGLLHLLLRFF
Sbjct: 1   MATPSQPISNLSLPPPSPETQSDGGFNLDSEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120
           HKPQIRTD EDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP
Sbjct: 61  HKPQIRTDLEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDP 120

Query: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFS 180
           FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAI+GGFS
Sbjct: 121 FDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGGFS 180

Query: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240
           SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK
Sbjct: 181 SPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKFK 240

Query: 241 NLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPLMLG 300
           NLE NGEGSSNN NVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRK VRKKKDLPLMLG
Sbjct: 241 NLECNGEGSSNNGNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDLPLMLG 300

Query: 301 SRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRAFSF 360
           SRAAISECDCESRR+FNFEELSGRVESFRHGNSKDSCEEKVAG GDR+ VMDL+RRAFSF
Sbjct: 301 SRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGTGDRLPVMDLTRRAFSF 360

Query: 361 HFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420
           HFPANRNRPRSENGMG MDEENQRR+SLE VENRPSFVRRTLQWLMGKNNNRIVHSSFTP
Sbjct: 361 HFPANRNRPRSENGMGTMDEENQRRSSLEIVENRPSFVRRTLQWLMGKNNNRIVHSSFTP 420

Query: 421 NDDDDHS 428
           NDD+DHS
Sbjct: 421 NDDEDHS 427

[Close]

BLAST of Csa2G047810 vs. NCBI nr
Match: gi|567922962|ref|XP_006453487.1| (hypothetical protein CICLE_v10008104mg [Citrus clementina])

HSP 1 Score: 410.6 bits (1054), Expect = 3.3e-111
Identity = 259/491 (52.75%), Postives = 302/491 (61.51%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNLDN+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLDNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P D+LRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREIG-----------EVHTGSFLGFLGDVS------DFTELKTEEPPAT 244
           V VLES S SSREIG            + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIGGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 GA-----------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
            A           E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVMDENS 
Sbjct: 258 DAVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMDENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGSNISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810 vs. NCBI nr
Match: gi|641843470|gb|KDO62370.1| (hypothetical protein CISIN_1g042083mg [Citrus sinensis])

HSP 1 Score: 404.4 bits (1038), Expect = 2.4e-109
Identity = 256/491 (52.14%), Postives = 300/491 (61.10%), Query Frame = 1


Query: 5   SQPISNF-PLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKP 64
           SQP  NF P PPPSP   +DG FNL+N+VSP+ILL IIILAIIFF SGLLHLL+RF  +P
Sbjct: 18  SQP--NFLPQPPPSPQNVNDG-FNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP 77

Query: 65  QIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDC 124
             R DPED        +A QGQL+QLFHLHDAGVDQSFIDTLPVF YKAIIGLK +PFDC
Sbjct: 78  TNR-DPEDLD----NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDC 137

Query: 125 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPI 184
           +VCLCEF+P DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRASL+ DF++ N    SP+
Sbjct: 138 AVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNS--CSPV 197

Query: 185 VGVLESASNSSREI-----------GEVHTGSFLGFLGDVS------DFTELKTEEPP-- 244
           V VLES S SSREI             + T + LG  G         D+T    E  P  
Sbjct: 198 VLVLESGSESSREIAGDRDNLGRTNSVLRTSTHLGCRGSSEFGSSHIDYTHKSCEILPKE 257

Query: 245 ---------ATGAETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSS 304
                        E VVP+KLGK++ ++  GE SSNN N+ +RRCFSMGSF YVM+ENS 
Sbjct: 258 DVVTSPTAVLDSGEKVVPVKLGKYRTVD-GGESSSNN-NIDARRCFSMGSFEYVMEENSL 317

Query: 305 LQVPIRTPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEELSGRVESFRHGNSK 364
           LQV IRTP V+KQ  KK  LPL  G R A+SECDCESRREFN F+ + G   SF    S 
Sbjct: 318 LQVTIRTP-VKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGANISA 377

Query: 365 DSCEEKVAGAGDRVAVM---------------DLSRRAFSFHFPANRNRP--------RS 422
               +      D  ++                D SRRAFSF FP NRN          +S
Sbjct: 378 GKGNDIGRSKTDSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKS 437

[Close]

BLAST of Csa2G047810 vs. NCBI nr
Match: gi|566215213|ref|XP_002324500.2| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-107
Identity = 247/456 (54.17%), Postives = 293/456 (64.25%), Query Frame = 1


Query: 14  PPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFFHKPQIR-TDPEDS 73
           PPP P   +DG FNL   VSP+ILL IIILAIIFF SGLLHLL+RF  +P  R TD  +S
Sbjct: 26  PPPQPKLDTDG-FNLSTRVSPSILLIIIILAIIFFVSGLLHLLVRFLSRPPNRETDDLES 85

Query: 74  TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQP 133
                  +A QGQL+QLFHLHDAGVDQ+FID LPVF YKAIIGLK +PFDC+VCLCEF+P
Sbjct: 86  V------TALQGQLQQLFHLHDAGVDQTFIDALPVFHYKAIIGLK-NPFDCAVCLCEFEP 145

Query: 134 NDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASN 193
            DKLRLL KCSHAFHM+CIDTWLL+HSTCPLCRA L+SDF+  N    SPIV VLES   
Sbjct: 146 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRACLLSDFSPNNS--CSPIVLVLESGGE 205

Query: 194 SSREI------------GEVHTGSFLGFLGD----------VSDFTELKTEEPPATGA-- 253
           SSREI              + T S L   GD              +E+ T++     +  
Sbjct: 206 SSREIVNDREADIGRTTSVLTTNSHLSCHGDNELGSSRLDISHKSSEILTKDDSVPDSAP 265

Query: 254 -------ETVVPIKLGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIR 313
                  + VVP+KLGKF+N++ NGEGSS   NV SRRC+SMGSF YV+DENSSLQVP+R
Sbjct: 266 TIVVDSWDKVVPVKLGKFRNVD-NGEGSS-TINVDSRRCYSMGSFEYVLDENSSLQVPVR 325

Query: 314 TPAVRKQVRKKKDLPLMLGSRAAISECDCESRREFN-FEEL--------SGRVESFRHGN 373
           TP ++KQ  KK  LPL  G R A+SECDCESRREF+ FE L        +  V S  +G 
Sbjct: 326 TP-MKKQSSKKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNGTASIVSSSGNGI 385

Query: 374 SKDSCE----EKVAGAGDRV---AVMDLSRRAFSFHFPANRNRPRSENGMGMMDEENQRR 422
            +   E     K+   G +V   +  D SRRAFSF FP N+N     +G    DE+NQ  
Sbjct: 386 GRSKRESFSISKIWLRGKKVKQNSPEDSSRRAFSFRFPVNKN--VVADGQWGCDEQNQSC 445

The following BLAST results are available for this feature:

BLAST of Csa2G047810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL13_ARATH	7.0e-85	45.02	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2	[more]
ATL49_ARATH	2.1e-73	40.18	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1	[more]
ATL46_ARATH	6.4e-54	40.90	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1	[more]
ATL47_ARATH	1.2e-47	39.45	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1	[more]
ATL50_ARATH	3.6e-41	50.27	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana GN=ATL50 PE=3 SV=1	[more]

BLAST of Csa2G047810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH59_CUCSA	5.3e-249	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G047810 PE=4 SV=1	[more]
V4UKQ9_9ROSI	2.3e-111	52.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008104mg PE=4 SV=1	[more]
A0A067F897_CITSI	1.7e-109	52.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042083mg PE=4 SV=1	[more]
B9IM58_POPTR	1.2e-107	54.17	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0018s10760g PE=4 SV=2	[more]
A0A067KRN7_JATCU	1.5e-105	52.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04120 PE=4 SV=1	[more]

BLAST of Csa2G047810 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30400.1	4.0e-86	45.02	RING/U-box superfamily protein	[more]
AT2G18650.1	1.2e-74	40.18	RING/U-box superfamily protein	[more]
AT5G40250.1	3.6e-55	40.90	RING/U-box superfamily protein	[more]
AT1G23980.1	6.6e-49	39.45	RING/U-box superfamily protein	[more]
AT5G57750.1	2.1e-42	50.27	RING/U-box superfamily protein	[more]

BLAST of Csa2G047810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462741\|ref\|XP_004149099.1\|	7.6e-249	100.00	PREDICTED: RING-H2 finger protein ATL13 [Cucumis sativus]	[more]
gi\|659069895\|ref\|XP_008452317.1\|	2.3e-237	95.55	PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo]	[more]
gi\|567922962\|ref\|XP_006453487.1\|	3.3e-111	52.75	hypothetical protein CICLE_v10008104mg [Citrus clementina]	[more]
gi\|641843470\|gb\|KDO62370.1\|	2.4e-109	52.14	hypothetical protein CISIN_1g042083mg [Citrus sinensis]	[more]
gi\|566215213\|ref\|XP_002324500.2\|	1.7e-107	54.17	zinc finger family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0044267	cellular protein metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0008076	voltage-gated potassium channel complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005249	voltage-gated potassium channel activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU117108	cucumber EST collection version 3.0	transcribed_cluster
CU145855	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G047810.1	Csa2G047810.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU145855	CU145855	transcribed_cluster
CU117108	CU117108	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 122..165 score: 3.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 123..164 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 123..165 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 122..168 score: 6.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 12..192 score: 8.6
None	No IPR available	PANTHER	PTHR14155:SF80	RING-H2 FINGER PROTEIN ATL13-RELATED	coord: 12..192 score: 8.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 105..171 score: 1.21

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G047810	Cla018783	Watermelon (97103) v1	cuwmB169
Csa2G047810	Cla022862	Watermelon (97103) v1	cuwmB163
Csa2G047810	MELO3C010166	Melon (DHL92) v3.5.1	cumeB113
Csa2G047810	MELO3C004094	Melon (DHL92) v3.5.1	cumeB139
Csa2G047810	ClCG11G012580	Watermelon (Charleston Gray)	cuwcgB103
Csa2G047810	ClCG06G012920	Watermelon (Charleston Gray)	cuwcgB149
Csa2G047810	Lsi11G007200	Bottle gourd (USVL1VR-Ls)	culsiB098
Csa2G047810	MELO3C004094.2	Melon (DHL92) v3.6.1	cumedB132
Csa2G047810	MELO3C010166.2	Melon (DHL92) v3.6.1	cumedB108
Csa2G047810	Cla97C06G122230	Watermelon (97103) v2	cuwmbB143
Csa2G047810	Cla97C11G218440	Watermelon (97103) v2	cuwmbB109
Csa2G047810	Bhi02G000629	Wax gourd	cuwgoB216
Csa2G047810	Bhi06G001178	Wax gourd	cuwgoB136
Csa2G047810	CSPI01G18290	Wild cucumber (PI 183967)	cpicuB014
Csa2G047810	CSPI02G05560	Wild cucumber (PI 183967)	cpicuB065
Csa2G047810	Cucsa.089790	Cucumber (Gy14) v1	cgycuB096
Csa2G047810	CmaCh12G009970	Cucurbita maxima (Rimu)	cmacuB167
Csa2G047810	CmaCh05G006640	Cucurbita maxima (Rimu)	cmacuB786
Csa2G047810	CmaCh10G004290	Cucurbita maxima (Rimu)	cmacuB076
Csa2G047810	CmaCh11G004210	Cucurbita maxima (Rimu)	cmacuB120
Csa2G047810	CmoCh05G006970	Cucurbita moschata (Rifu)	cmocuB779
Csa2G047810	CmoCh11G004220	Cucurbita moschata (Rifu)	cmocuB106
Csa2G047810	CmoCh10G004600	Cucurbita moschata (Rifu)	cmocuB066
Csa2G047810	CmoCh12G010070	Cucurbita moschata (Rifu)	cmocuB152
Csa2G047810	Cp4.1LG04g12810	Cucurbita pepo (Zucchini)	cpecuB664
Csa2G047810	Cp4.1LG18g05900	Cucurbita pepo (Zucchini)	cpecuB371
Csa2G047810	Cp4.1LG11g05920	Cucurbita pepo (Zucchini)	cpecuB098
Csa2G047810	Cp4.1LG07g08380	Cucurbita pepo (Zucchini)	cpecuB815
Csa2G047810	CsGy1G018350	Cucumber (Gy14) v2	cgybcuB017
Csa2G047810	CsGy2G005700	Cucumber (Gy14) v2	cgybcuB056
Csa2G047810	Carg08354	Silver-seed gourd	carcuB0060
Csa2G047810	Carg14051	Silver-seed gourd	carcuB0533

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa2G047810	Csa1G294600	Cucumber (Chinese Long) v2	cucuB006

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G047810	Cucumber (Chinese Long) v2	cucuB009