Csa2G013260 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G013260
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein, putative; contains IPR002885 (Pentatricopeptide repeat)
LocationChr2 : 2296219 .. 2297461 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTTTTGTTCCTCTTCTTTATTGCTTCTTTGTATGCTACCATTTTTTAGGATCATACATAATGTTATTTGCTACAAGATAAAGACTCTCCTATTCTTACTGGCATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAGATACTATAAATTCTTTTTATATCTTGTTCTCAAATATATATATGAAATCCAAATGGCATGTGGAGAAGATTTAGAGAAGAATTTTTCACGATAAATACTCCTTGAA

mRNA sequence

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG

Coding sequence (CDS)

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG

Protein sequence

MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS*
Homology
[Close]
BLAST of Csa2G013260 vs. Swiss-Prot
Match: PPR16_ARATH (Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana GN=At1g06270 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.3e-94
Identity = 175/317 (55.21%), Postives = 231/317 (72.87%), Query Frame = 1 

Query: 27  SISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEIL 86
           SIS  + ++ +IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P+PQTH LLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDL 206
           ++R  ++SVA+I+ +M+ IGY PD+  CNYL+SSLC++ +L EA +V++ M  AGCIPD+
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDV 206

Query: 207 ESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIE 266
           ESYG +I++    R+T   V+++KEMV K  + PR+G +T V AALR NRE+ +A+E+IE
Sbjct: 207 ESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIG 326
            +E   + V FESYE++VEGCLE REYILAGKV M MTDRGFIPYIKVRQ+VVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EVELASAVRRRFVELGS 344
           E +LA  VR+R  EL S
Sbjct: 327 EWKLACTVRQRVSELRS 343

[Close]
BLAST of Csa2G013260 vs. Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.3e-16
Identity = 61/212 (28.77%), Postives = 95/212 (44.81%), Query Frame = 1 

Query: 131 CVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEA 190
           C+P   T+  L     K+    ++V  +L +MQS G  P   I N LI  LC  G+L   
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 277

Query: 191 FQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVA 250
            +++  M   GC+P+  +Y TLIH      + DKAV LL+ M V  K +P   T   ++ 
Sbjct: 278 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLIN 337

Query: 251 ALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIP 310
            L   R    AV ++  +E   + +    Y +L+ G  +  +   A  +   M ++G  P
Sbjct: 338 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 397

Query: 311 YIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
            I V   +V+GL   G+   A  +  R +  G
Sbjct: 398 NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427


HSP 2 Score: 58.2 bits (139), Expect = 2.1e-07
Identity = 54/221 (24.43%), Postives = 91/221 (41.18%), Query Frame = 1 

Query: 122 VLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSL 181
           +L  +   GC PSP  + +L     K+    + V  ++ +M   G  P+    N LI  L
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTR-VTKLVDNMFLKGCVPNEVTYNTLIHGL 303

Query: 182 CSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPR 241
           C  G+L +A  +L+ M  + CIP+  +YGTLI+     RR   AV LL  M  +   +  
Sbjct: 304 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL-N 363

Query: 242 QGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTM 301
           Q   + +++ L    +   A+ +   +           Y +LV+G     +   A ++  
Sbjct: 364 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 423

Query: 302 GMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
            M   G +P       +++G    G  E A  V +   + G
Sbjct: 424 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462

[Close]
BLAST of Csa2G013260 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-13
Identity = 57/224 (25.45%), Postives = 104/224 (46.43%), Query Frame = 1 

Query: 119 SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLI 178
           ++ V +R++  G  PS QT+  L    L +R    SV  +L +M+++G KP+       I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVG-LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 266

Query: 179 SSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKL 238
             L   G++ EA+++LK M   GC PD+ +Y  LI A    R+ D A E+ ++M    + 
Sbjct: 267 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG-RH 326

Query: 239 MPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGK 298
            P + T   ++     NR++    +    +E+D H     ++ +LV+   +   +  A  
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 386

Query: 299 VTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
               M D+G +P +     ++ GL  +  ++ A  +      LG
Sbjct: 387 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428


HSP 2 Score: 54.3 bits (129), Expect = 3.1e-06
Identity = 44/189 (23.28%), Postives = 75/189 (39.68%), Query Frame = 1 

Query: 154 SVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLI 213
           SV     +M+  G+ PD      L+ +LC  G   EAF  L  M   G +P+L +Y TLI
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405

Query: 214 HAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSH 273
                V R D A+EL   M   + + P   T    +     + +   A+E  E ++    
Sbjct: 406 CGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 465

Query: 274 DVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 333
                +    +    +      A ++  G+ D G +P       +++  + +GE++ A  
Sbjct: 466 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 525

Query: 334 VRRRFVELG 343
           +    +E G
Sbjct: 526 LLSEMMENG 533

[Close]
BLAST of Csa2G013260 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-12
Identity = 74/322 (22.98%), Postives = 133/322 (41.30%), Query Frame = 1 

Query: 17  HFLGQYSSIHSISPSQ-TLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPL 76
           +F+ + S+     P Q T    +    ++   K   ++   + +  ++P+++ + S    
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 77  NLRTQVVDEILQSLISIRPRSKS-QFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPS 136
             +   V E ++ L  +  R  S   V  + L  TL   +    +  + + +   G +P 
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399

Query: 137 PQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVL 196
             T   L       R+   ++  +  +M+S G +PD    N LI SLCS G+L EA  +L
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAM-ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 459

Query: 197 KGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRT 256
           K M  +GC   + +Y TLI       +T +A E+  EM V   +     T   ++  L  
Sbjct: 460 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCK 519

Query: 257 NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKV 316
           +R V  A ++++ +  +       +Y  L+       +   A  +   MT  G  P I  
Sbjct: 520 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 579

Query: 317 RQEVVEGLAGIGEVELASAVRR 337
              ++ GL   G VE+AS + R
Sbjct: 580 YGTLISGLCKAGRVEVASKLLR 599


HSP 2 Score: 63.9 bits (154), Expect = 3.9e-09
Identity = 46/175 (26.29%), Postives = 79/175 (45.14%), Query Frame = 1 

Query: 151 QAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYG 210
           + +  A ++  M   G KPD    N L++  C  G++ +A  +++ M   GC PD+ +YG
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579

Query: 211 TLIHAATAVRRTDKAVELLKEMVVK-VKLMPRQGTITNVVAALRTNREVRRAVEII-ELL 270
           TLI       R + A +LL+ + +K + L P       V+  L   R+   A+ +  E+L
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREML 639

Query: 271 ERDSHDVGFESYELLVEG-CLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGL 323
           E++       SY ++  G C        A    + + ++GF+P       + EGL
Sbjct: 640 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692


HSP 3 Score: 53.1 bits (126), Expect = 6.8e-06
Identity = 49/202 (24.26%), Postives = 82/202 (40.59%), Query Frame = 1 

Query: 135 PQTHFLLSSAWLKQRSQAKSVANILMDMQSI-GYKPDSNICNYLISSLCSIGELAEAFQV 194
           P THF      L     +  +  I     S+ G KPD +  N LI +LC   +L  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 195 LKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALR 254
           L+ M   G +PD +++ T++         D A+  ++E +V+        ++  +V    
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR-IREQMVEFGCSWSNVSVNVIVHGFC 271

Query: 255 TNREVRRAVEII-ELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYI 314
               V  A+  I E+  +D       ++  LV G  +      A ++   M   G+ P +
Sbjct: 272 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 331

Query: 315 KVRQEVVEGLAGIGEVELASAV 335
                V+ GL  +GEV+ A  V
Sbjct: 332 YTYNSVISGLCKLGEVKEAVEV 352

[Close]
BLAST of Csa2G013260 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-11
Identity = 55/226 (24.34%), Postives = 100/226 (44.25%), Query Frame = 1 

Query: 118 LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYL 177
           L+L VL  + + GC P+  ++ +L   + K   +     N+L +M + G KP++   N L
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCL 466

Query: 178 ISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVK 237
           IS+ C    + EA ++ + M   GC PD+ ++ +LI     V     A+ LL++M+ +  
Sbjct: 467 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-G 526

Query: 238 LMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAG 297
           ++    T   ++ A     E++ A +++  +      +   +Y  L++G     E   A 
Sbjct: 527 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 586

Query: 298 KVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
            +   M   G  P       ++ GL   G VE A   ++  V  GS
Sbjct: 587 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630


HSP 2 Score: 60.5 bits (145), Expect = 4.3e-08
Identity = 52/213 (24.41%), Postives = 92/213 (43.19%), Query Frame = 1 

Query: 130 GCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAE 189
           G VP   T+  L   + K+     ++  +L DM++ G KP+      L+   C +G++ E
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLAL-EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 443

Query: 190 AFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVV 249
           A+ VL  M   G  P+   +  LI A     R  +AVE+ +EM  K    P   T  +++
Sbjct: 444 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLI 503

Query: 250 AALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFI 309
           + L    E++ A+ ++  +  +       +Y  L+   L   E   A K+   M  +G  
Sbjct: 504 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 563

Query: 310 PYIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
                   +++GL   GEV+ A ++  + +  G
Sbjct: 564 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594


HSP 3 Score: 48.5 bits (114), Expect = 1.7e-04
Identity = 26/86 (30.23%), Postives = 44/86 (51.16%), Query Frame = 1 

Query: 150 SQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESY 209
           ++  S  ++L DM   G  P+S I   LI SL     + EA Q+L+ M   GC+PD E++
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290

Query: 210 GTLIHAATAVRRTDKAVELLKEMVVK 236
             +I       R ++A +++  M+++
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIR 316

[Close]
BLAST of Csa2G013260 vs. TrEMBL
Match: A0A0A0LFL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013260 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 2.6e-190
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 343

[Close]
BLAST of Csa2G013260 vs. TrEMBL
Match: E0CTM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02610 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 9.6e-116
Identity = 217/343 (63.27%), Postives = 262/343 (76.38%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG TK    L +FH+ L Q SSIHSI+ SQTL++SIKAAVESK+Y+K+PDL  SL+E 
Sbjct: 1   MAIGATKLCRSLFHFHYSLRQISSIHSITSSQTLEESIKAAVESKTYQKIPDLLISLEET 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTF  NLRTQVVDEILQS I +RPRS+ Q  +  LL +TLQS +P PL+L
Sbjct: 61  CLNPNPFSFLSTFSQNLRTQVVDEILQSFIPLRPRSRPQIAYACLLSFTLQSANPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGC+P PQTH LLSSAWL +R Q+ SV+NIL +MQSIGY PD   CNYLI S
Sbjct: 121 AILQRTLRSGCIPVPQTHLLLSSAWLSRRRQSHSVSNILSEMQSIGYYPDCGTCNYLILS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA  VLK MG  GCIPDLE YG++I A  A+RRT  A EL+KEMV K+ L P
Sbjct: 181 LCAIDQLVEAVIVLKSMGQVGCIPDLEGYGSVIGAMCAMRRTTDATELMKEMVAKIGLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGT+ N+VAALR  +E+ +AVE+IE LE +  + GF SYE ++EGCL C E++LAGKV 
Sbjct: 241 RQGTVLNLVAALRAKKEIWKAVEMIEFLEGEDFNAGFASYESVLEGCLACHEFVLAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT RGFIPYI VRQ+VVEGLA +GE +LA AVR+RF +L S
Sbjct: 301 MGMTARGFIPYIGVRQKVVEGLANLGEWKLALAVRQRFADLRS 343

[Close]
BLAST of Csa2G013260 vs. TrEMBL
Match: M5WQ10_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021626mg PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.4e-111
Identity = 213/343 (62.10%), Postives = 259/343 (75.51%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M I   K     L  H  L QY SI+SIS SQ LQ++IK AVE+K+Y+K+PDL  S  +A
Sbjct: 1   MAIRAAKFCRSFLPLHCRLLQYCSIYSISSSQMLQETIKNAVEAKTYQKIPDLLKSSAQA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS+FP NLRTQVVDEILQS I +RPRS+ Q  +  LL +TLQ  +PFPL+L
Sbjct: 61  CQNPNPFSFLSSFPHNLRTQVVDEILQSFIPLRPRSRGQIAYSYLLSFTLQCSNPFPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGC+P PQT  LLSSAWL  R+++ SV+ IL++MQSIGY PD   CNYLISS
Sbjct: 121 AILQRTLRSGCIPVPQTLLLLSSAWLNCRNESHSVSKILLEMQSIGYHPDCGTCNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCS+ +L EA +VLK M  AGC+PDLES+ T+I A   VRRT +A++++K+MV KV L P
Sbjct: 181 LCSVDQLNEAVKVLKEMSRAGCVPDLESFDTVIGAMCTVRRTAEAIDMIKQMVEKVGLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTI  V AALR NR + RAVE+IE LERD + VGFESYEL+V GCL+C EYILAGKV 
Sbjct: 241 RQGTIAKVAAALRANRNIWRAVEMIEFLERDGYPVGFESYELVVNGCLDCGEYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT+RGFIPYI+ RQ+VVE LAG GE +LA +VR+RF EL S
Sbjct: 301 MGMTERGFIPYIRTRQKVVERLAGAGEWKLACSVRQRFGELRS 343

[Close]
BLAST of Csa2G013260 vs. TrEMBL
Match: A0A067DSI9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046547mg PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.0e-109
Identity = 200/343 (58.31%), Postives = 263/343 (76.68%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG  K+   L+NF   L Q+SS+ S+S  +TL+++++AAV++K Y+++P+L  S +EA
Sbjct: 1   MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS FP N R +V+DE+L+S I +RPRS+ +  +  LL YTLQS  P PL+L
Sbjct: 61  CQNPNPFSFLSNFPQNHRIKVIDEMLESFIPLRPRSRPKIAYDYLLSYTLQSLHPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGCVP PQ   LLSSAWL++R Q++SVA+IL++M+SIGY PD   CNYL+SS
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERRCQSQSVADILLEMKSIGYHPDCGTCNYLVSS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA +VLKGM  A C+PDLESY  +I A +  R+T+ AVE++KEMV+ + LMP
Sbjct: 181 LCAIDQLVEAAKVLKGMSSAECVPDLESYSIVIGAMSTARKTNDAVEMMKEMVLNMGLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQG +  V AALR NRE+ +AVE+IE LER    +GF+ YE++VEGCLECREYILAGK  
Sbjct: 241 RQGMVIKVAAALRANREMWKAVEMIEFLERKGCPIGFQGYEVVVEGCLECREYILAGKTV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT+RGFIPYIKVRQ+VVEGLAG+GE +LA+ VR+RF EL S
Sbjct: 301 MGMTERGFIPYIKVRQKVVEGLAGVGEWKLATVVRQRFAELKS 343

[Close]
BLAST of Csa2G013260 vs. TrEMBL
Match: V4UCI9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017507mg PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 3.0e-109
Identity = 200/343 (58.31%), Postives = 262/343 (76.38%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG  K+   L+NF   L Q+SS+ S+S  +TL+++++AAV++K Y+++P+L  S +EA
Sbjct: 1   MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS FP N R +V+DE+L+S I +RPRS+ +  +  LL YTLQS  P PL+L
Sbjct: 61  CQNPNPFSFLSNFPQNHRIKVIDEMLESFIPLRPRSRPKIAYDYLLSYTLQSLHPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGCVP PQ   LLSSAWL++R Q++SVA+IL++M+SIGY PD   CNYL+SS
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERRCQSQSVADILLEMKSIGYHPDCGTCNYLVSS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA +VLKGM    CIPDLESY  +I A +  R+T+ AVE++KEMV+ + LMP
Sbjct: 181 LCAIDQLVEAAKVLKGMSNVECIPDLESYSIVIGAMSTARKTNDAVEMMKEMVLNMGLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQG +  V AALR NRE+ +AVE+I+ LER    +GF+ YE++VEGCLECREYILAGK  
Sbjct: 241 RQGMVIKVAAALRANREMWKAVEMIKFLERKGCPIGFQGYEVVVEGCLECREYILAGKTV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT+RGFIPYIKVRQ+VVEGLAG+GE +LAS VR+RF EL S
Sbjct: 301 MGMTERGFIPYIKVRQKVVEGLAGVGEWKLASVVRQRFAELKS 343

[Close]
BLAST of Csa2G013260 vs. TAIR10
Match: AT1G06270.1 (AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 347.8 bits (891), Expect = 7.5e-96
Identity = 175/317 (55.21%), Postives = 231/317 (72.87%), Query Frame = 1 

Query: 27  SISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEIL 86
           SIS  + ++ +IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P+PQTH LLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDL 206
           ++R  ++SVA+I+ +M+ IGY PD+  CNYL+SSLC++ +L EA +V++ M  AGCIPD+
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDV 206

Query: 207 ESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIE 266
           ESYG +I++    R+T   V+++KEMV K  + PR+G +T V AALR NRE+ +A+E+IE
Sbjct: 207 ESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIG 326
            +E   + V FESYE++VEGCLE REYILAGKV M MTDRGFIPYIKVRQ+VVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EVELASAVRRRFVELGS 344
           E +LA  VR+R  EL S
Sbjct: 327 EWKLACTVRQRVSELRS 343

[Close]
BLAST of Csa2G013260 vs. TAIR10
Match: AT4G20090.1 (AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-17
Identity = 61/212 (28.77%), Postives = 95/212 (44.81%), Query Frame = 1 

Query: 131 CVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEA 190
           C+P   T+  L     K+    ++V  +L +MQS G  P   I N LI  LC  G+L   
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 277

Query: 191 FQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVA 250
            +++  M   GC+P+  +Y TLIH      + DKAV LL+ M V  K +P   T   ++ 
Sbjct: 278 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLIN 337

Query: 251 ALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIP 310
            L   R    AV ++  +E   + +    Y +L+ G  +  +   A  +   M ++G  P
Sbjct: 338 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 397

Query: 311 YIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
            I V   +V+GL   G+   A  +  R +  G
Sbjct: 398 NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427


HSP 2 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 54/221 (24.43%), Postives = 91/221 (41.18%), Query Frame = 1 

Query: 122 VLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSL 181
           +L  +   GC PSP  + +L     K+    + V  ++ +M   G  P+    N LI  L
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTR-VTKLVDNMFLKGCVPNEVTYNTLIHGL 303

Query: 182 CSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPR 241
           C  G+L +A  +L+ M  + CIP+  +YGTLI+     RR   AV LL  M  +   +  
Sbjct: 304 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL-N 363

Query: 242 QGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTM 301
           Q   + +++ L    +   A+ +   +           Y +LV+G     +   A ++  
Sbjct: 364 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 423

Query: 302 GMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
            M   G +P       +++G    G  E A  V +   + G
Sbjct: 424 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462

[Close]
BLAST of Csa2G013260 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-14
Identity = 57/224 (25.45%), Postives = 104/224 (46.43%), Query Frame = 1 

Query: 119 SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLI 178
           ++ V +R++  G  PS QT+  L    L +R    SV  +L +M+++G KP+       I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVG-LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 266

Query: 179 SSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKL 238
             L   G++ EA+++LK M   GC PD+ +Y  LI A    R+ D A E+ ++M    + 
Sbjct: 267 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG-RH 326

Query: 239 MPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGK 298
            P + T   ++     NR++    +    +E+D H     ++ +LV+   +   +  A  
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 386

Query: 299 VTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
               M D+G +P +     ++ GL  +  ++ A  +      LG
Sbjct: 387 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428


HSP 2 Score: 54.3 bits (129), Expect = 1.7e-07
Identity = 44/189 (23.28%), Postives = 75/189 (39.68%), Query Frame = 1 

Query: 154 SVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLI 213
           SV     +M+  G+ PD      L+ +LC  G   EAF  L  M   G +P+L +Y TLI
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405

Query: 214 HAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSH 273
                V R D A+EL   M   + + P   T    +     + +   A+E  E ++    
Sbjct: 406 CGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 465

Query: 274 DVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 333
                +    +    +      A ++  G+ D G +P       +++  + +GE++ A  
Sbjct: 466 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 525

Query: 334 VRRRFVELG 343
           +    +E G
Sbjct: 526 LLSEMMENG 533

[Close]
BLAST of Csa2G013260 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 74/322 (22.98%), Postives = 133/322 (41.30%), Query Frame = 1 

Query: 17  HFLGQYSSIHSISPSQ-TLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPL 76
           +F+ + S+     P Q T    +    ++   K   ++   + +  ++P+++ + S    
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 77  NLRTQVVDEILQSLISIRPRSKS-QFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPS 136
             +   V E ++ L  +  R  S   V  + L  TL   +    +  + + +   G +P 
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399

Query: 137 PQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVL 196
             T   L       R+   ++  +  +M+S G +PD    N LI SLCS G+L EA  +L
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAM-ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 459

Query: 197 KGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRT 256
           K M  +GC   + +Y TLI       +T +A E+  EM V   +     T   ++  L  
Sbjct: 460 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCK 519

Query: 257 NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKV 316
           +R V  A ++++ +  +       +Y  L+       +   A  +   MT  G  P I  
Sbjct: 520 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 579

Query: 317 RQEVVEGLAGIGEVELASAVRR 337
              ++ GL   G VE+AS + R
Sbjct: 580 YGTLISGLCKAGRVEVASKLLR 599


HSP 2 Score: 63.9 bits (154), Expect = 2.2e-10
Identity = 46/175 (26.29%), Postives = 79/175 (45.14%), Query Frame = 1 

Query: 151 QAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYG 210
           + +  A ++  M   G KPD    N L++  C  G++ +A  +++ M   GC PD+ +YG
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579

Query: 211 TLIHAATAVRRTDKAVELLKEMVVK-VKLMPRQGTITNVVAALRTNREVRRAVEII-ELL 270
           TLI       R + A +LL+ + +K + L P       V+  L   R+   A+ +  E+L
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREML 639

Query: 271 ERDSHDVGFESYELLVEG-CLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGL 323
           E++       SY ++  G C        A    + + ++GF+P       + EGL
Sbjct: 640 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692


HSP 3 Score: 53.1 bits (126), Expect = 3.8e-07
Identity = 49/202 (24.26%), Postives = 82/202 (40.59%), Query Frame = 1 

Query: 135 PQTHFLLSSAWLKQRSQAKSVANILMDMQSI-GYKPDSNICNYLISSLCSIGELAEAFQV 194
           P THF      L     +  +  I     S+ G KPD +  N LI +LC   +L  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 195 LKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALR 254
           L+ M   G +PD +++ T++         D A+  ++E +V+        ++  +V    
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR-IREQMVEFGCSWSNVSVNVIVHGFC 271

Query: 255 TNREVRRAVEII-ELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYI 314
               V  A+  I E+  +D       ++  LV G  +      A ++   M   G+ P +
Sbjct: 272 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 331

Query: 315 KVRQEVVEGLAGIGEVELASAV 335
                V+ GL  +GEV+ A  V
Sbjct: 332 YTYNSVISGLCKLGEVKEAVEV 352

[Close]
BLAST of Csa2G013260 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 4.0e-12
Identity = 55/226 (24.34%), Postives = 100/226 (44.25%), Query Frame = 1 

Query: 118 LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYL 177
           L+L VL  + + GC P+  ++ +L   + K   +     N+L +M + G KP++   N L
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCL 466

Query: 178 ISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVK 237
           IS+ C    + EA ++ + M   GC PD+ ++ +LI     V     A+ LL++M+ +  
Sbjct: 467 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-G 526

Query: 238 LMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAG 297
           ++    T   ++ A     E++ A +++  +      +   +Y  L++G     E   A 
Sbjct: 527 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 586

Query: 298 KVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
            +   M   G  P       ++ GL   G VE A   ++  V  GS
Sbjct: 587 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630


HSP 2 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 52/213 (24.41%), Postives = 92/213 (43.19%), Query Frame = 1 

Query: 130 GCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAE 189
           G VP   T+  L   + K+     ++  +L DM++ G KP+      L+   C +G++ E
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLAL-EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 443

Query: 190 AFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVV 249
           A+ VL  M   G  P+   +  LI A     R  +AVE+ +EM  K    P   T  +++
Sbjct: 444 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLI 503

Query: 250 AALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFI 309
           + L    E++ A+ ++  +  +       +Y  L+   L   E   A K+   M  +G  
Sbjct: 504 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 563

Query: 310 PYIKVRQEVVEGLAGIGEVELASAVRRRFVELG 343
                   +++GL   GEV+ A ++  + +  G
Sbjct: 564 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594


HSP 3 Score: 48.5 bits (114), Expect = 9.5e-06
Identity = 26/86 (30.23%), Postives = 44/86 (51.16%), Query Frame = 1 

Query: 150 SQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESY 209
           ++  S  ++L DM   G  P+S I   LI SL     + EA Q+L+ M   GC+PD E++
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290

Query: 210 GTLIHAATAVRRTDKAVELLKEMVVK 236
             +I       R ++A +++  M+++
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIR 316

[Close]
BLAST of Csa2G013260 vs. NCBI nr
Match: gi|449443213|ref|XP_004139374.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus])

HSP 1 Score: 672.5 bits (1734), Expect = 3.8e-190
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 343

[Close]
BLAST of Csa2G013260 vs. NCBI nr
Match: gi|659070534|ref|XP_008455557.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo])

HSP 1 Score: 638.3 bits (1645), Expect = 7.9e-180
Identity = 327/343 (95.34%), Postives = 331/343 (96.50%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TI NVVAALR NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           M MTDRGFIPYIKVRQ+VVEGL GIGE+ELASAVRRRFVELGS
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS 343

[Close]
BLAST of Csa2G013260 vs. NCBI nr
Match: gi|225446521|ref|XP_002278909.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Vitis vinifera])

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-115
Identity = 217/343 (63.27%), Postives = 262/343 (76.38%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG TK    L +FH+ L Q SSIHSI+ SQTL++SIKAAVESK+Y+K+PDL  SL+E 
Sbjct: 1   MAIGATKLCRSLFHFHYSLRQISSIHSITSSQTLEESIKAAVESKTYQKIPDLLISLEET 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTF  NLRTQVVDEILQS I +RPRS+ Q  +  LL +TLQS +P PL+L
Sbjct: 61  CLNPNPFSFLSTFSQNLRTQVVDEILQSFIPLRPRSRPQIAYACLLSFTLQSANPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGC+P PQTH LLSSAWL +R Q+ SV+NIL +MQSIGY PD   CNYLI S
Sbjct: 121 AILQRTLRSGCIPVPQTHLLLSSAWLSRRRQSHSVSNILSEMQSIGYYPDCGTCNYLILS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA  VLK MG  GCIPDLE YG++I A  A+RRT  A EL+KEMV K+ L P
Sbjct: 181 LCAIDQLVEAVIVLKSMGQVGCIPDLEGYGSVIGAMCAMRRTTDATELMKEMVAKIGLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGT+ N+VAALR  +E+ +AVE+IE LE +  + GF SYE ++EGCL C E++LAGKV 
Sbjct: 241 RQGTVLNLVAALRAKKEIWKAVEMIEFLEGEDFNAGFASYESVLEGCLACHEFVLAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT RGFIPYI VRQ+VVEGLA +GE +LA AVR+RF +L S
Sbjct: 301 MGMTARGFIPYIGVRQKVVEGLANLGEWKLALAVRQRFADLRS 343

[Close]
BLAST of Csa2G013260 vs. NCBI nr
Match: gi|645245954|ref|XP_008229126.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Prunus mume])

HSP 1 Score: 411.0 bits (1055), Expect = 2.1e-111
Identity = 213/343 (62.10%), Postives = 260/343 (75.80%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M I   K     L  H  L QY SI+SIS SQ LQ++IK AVE+K+Y+K+PDL  S  +A
Sbjct: 1   MAIRAAKFCRSFLPLHCRLLQYCSIYSISSSQMLQETIKNAVEAKTYQKIPDLLKSSAQA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP NLRTQVVDEILQS I +RPRS++Q  +  LL +TLQ  +PFPL+L
Sbjct: 61  CQNPNPFSFLSTFPHNLRTQVVDEILQSFIPLRPRSRTQIAYSYLLSFTLQCSNPFPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGC+P PQT  LLSSAWL  R+++ SV+ IL++MQSIGY PDS  CNYLI S
Sbjct: 121 AILQRTLRSGCIPVPQTLLLLSSAWLNCRNESHSVSKILLEMQSIGYHPDSGTCNYLILS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCS+ +L EA +VL  M  AGC+PDLES+ T+I A   VRRT +A++++K+MV KV L P
Sbjct: 181 LCSVDQLNEAVKVLMEMSRAGCVPDLESFDTVIGAMCTVRRTAEAIDMIKQMVEKVGLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTI  V AALR NR++ RAVE+IE LERD + VGFESYEL+V GCL+C EYILAGKV 
Sbjct: 241 RQGTIAKVAAALRANRDIWRAVEMIEFLERDGYPVGFESYELVVNGCLDCGEYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT+RGFIPYI+ RQ+VVE LAG GE +LA +VR+RF EL S
Sbjct: 301 MGMTERGFIPYIRTRQKVVERLAGAGEWKLACSVRQRFGELRS 343

[Close]
BLAST of Csa2G013260 vs. NCBI nr
Match: gi|595914252|ref|XP_007214673.1| (hypothetical protein PRUPE_ppa021626mg [Prunus persica])

HSP 1 Score: 411.0 bits (1055), Expect = 2.1e-111
Identity = 213/343 (62.10%), Postives = 259/343 (75.51%), Query Frame = 1 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M I   K     L  H  L QY SI+SIS SQ LQ++IK AVE+K+Y+K+PDL  S  +A
Sbjct: 1   MAIRAAKFCRSFLPLHCRLLQYCSIYSISSSQMLQETIKNAVEAKTYQKIPDLLKSSAQA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS+FP NLRTQVVDEILQS I +RPRS+ Q  +  LL +TLQ  +PFPL+L
Sbjct: 61  CQNPNPFSFLSSFPHNLRTQVVDEILQSFIPLRPRSRGQIAYSYLLSFTLQCSNPFPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGC+P PQT  LLSSAWL  R+++ SV+ IL++MQSIGY PD   CNYLISS
Sbjct: 121 AILQRTLRSGCIPVPQTLLLLSSAWLNCRNESHSVSKILLEMQSIGYHPDCGTCNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCS+ +L EA +VLK M  AGC+PDLES+ T+I A   VRRT +A++++K+MV KV L P
Sbjct: 181 LCSVDQLNEAVKVLKEMSRAGCVPDLESFDTVIGAMCTVRRTAEAIDMIKQMVEKVGLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTI  V AALR NR + RAVE+IE LERD + VGFESYEL+V GCL+C EYILAGKV 
Sbjct: 241 RQGTIAKVAAALRANRNIWRAVEMIEFLERDGYPVGFESYELVVNGCLDCGEYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT+RGFIPYI+ RQ+VVE LAG GE +LA +VR+RF EL S
Sbjct: 301 MGMTERGFIPYIRTRQKVVERLAGAGEWKLACSVRQRFGELRS 343

The following BLAST results are available for this feature:
BLAST of Csa2G013260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR16_ARATH1.3e-9455.21Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana GN... [more]
PP327_ARATH4.3e-1628.77Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN... [more]
PP344_ARATH3.4e-1325.45Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
PP281_ARATH2.9e-1222.98Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PP444_ARATH7.0e-1124.34Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
BLAST of Csa2G013260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFL3_CUCSA2.6e-190100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013260 PE=4 SV=1[more]
E0CTM4_VITVI9.6e-11663.27Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02610 PE=4 SV=... [more]
M5WQ10_PRUPE1.4e-11162.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021626mg PE=4 SV=1[more]
A0A067DSI9_CITSI1.0e-10958.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046547mg PE=4 SV=1[more]
V4UCI9_9ROSI3.0e-10958.31Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017507mg PE=4 SV=1[more]
BLAST of Csa2G013260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06270.17.5e-9655.21 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G20090.12.4e-1728.77 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G31850.11.9e-1425.45 proton gradient regulation 3[more]
AT3G53700.11.6e-1322.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G64320.14.0e-1224.34 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Csa2G013260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443213|ref|XP_004139374.1|3.8e-190100.00PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativu... [more]
gi|659070534|ref|XP_008455557.1|7.9e-18095.34PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo][more]
gi|225446521|ref|XP_002278909.1|1.4e-11563.27PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Vitis vinifera... [more]
gi|645245954|ref|XP_008229126.1|2.1e-11162.10PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Prunus mume][more]
gi|595914252|ref|XP_007214673.1|2.1e-11162.10hypothetical protein PRUPE_ppa021626mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088160cucumber EST collection version 3.0transcribed_cluster
CU115230cucumber EST collection version 3.0transcribed_cluster
CU144504cucumber EST collection version 3.0transcribed_cluster
CU156308cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G013260.1Csa2G013260.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU088160CU088160transcribed_cluster
CU144504CU144504transcribed_cluster
CU156308CU156308transcribed_cluster
CU115230CU115230transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 169..215
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 173..205
score: 8.1E-6coord: 208..233
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 205..235
score: 8.177coord: 170..204
score: 10.216coord: 276..310
score: 6.785coord: 134..169
score:
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 116..342
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G013260MELO3C004341Melon (DHL92) v3.5.1cumeB139
Csa2G013260MELO3C004341.2Melon (DHL92) v3.6.1cumedB132
Csa2G013260CSPI02G03350Wild cucumber (PI 183967)cpicuB065
Csa2G013260Cucsa.133600Cucumber (Gy14) v1cgycuB184
Csa2G013260CsGy2G003450Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G013260Silver-seed gourdcarcuB0324
Csa2G013260Silver-seed gourdcarcuB0735
Csa2G013260Watermelon (97103) v2cuwmbB118
Csa2G013260Wax gourdcuwgoB137
Csa2G013260Cucurbita maxima (Rimu)cmacuB173
Csa2G013260Cucurbita maxima (Rimu)cmacuB791
Csa2G013260Cucurbita moschata (Rifu)cmocuB157
Csa2G013260Cucurbita moschata (Rifu)cmocuB783
Csa2G013260Watermelon (Charleston Gray)cuwcgB122
Csa2G013260Watermelon (97103) v1cuwmB147
Csa2G013260Cucurbita pepo (Zucchini)cpecuB103
Csa2G013260Cucurbita pepo (Zucchini)cpecuB820
Csa2G013260Bottle gourd (USVL1VR-Ls)culsiB098