CsGy2G003450 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	pentatricopeptide repeat-containing protein At1g06270
Location	Chr2 : 2312857 .. 2315971 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAGATACTATAAATTCTTTTTATATCTTGTTCTCAAATATATATATGAAATCCAAATGGCATGTGGAGAAGATTTAGAGAAGAATTTTTCACGATAAATACTCCTTGAATATGTTCAAATTTTATTGTGCTTGAATCCTTTATTTTCTTTTGACTTTTTGGTGCTCATACACAATAACCTTTTACCAATTCTTATTGCATCACTATAGAATATAATTTAGTGAATGTAAAAATCTGCATGGTAAATTTAATTTTTTCACCTCTGAAGGTAGACATGTTCAATTAACACCAGGAAGTACCTTGCTTGTGGTTGAATCACGCTTCATTCTTATTCTTATGTAACTTGATTCACCCTAGCCAATGCCCCATGAATTCTTGACAAGTCAATAAGCTTTATTGCTAGCTTCCCTATACTCAACTATTGTTCCTTCACGATTCAGTTGCTCAATTGCTTGAGAAAATTCCACTAGAATAGAACTGAAAATTGTTCCCCCTGCATCAATTGCTACAGAGGCTGGCTGTTTAGCAATTGTTGGCTTTCTGCTTTTTAGCTTTTCTCATTGTTGACGAGTACTTTTTCATATCCACTTATTGACACAGACTGGTATTTCGCTTTTTGTTTGTTGCATGCAGATTCAGTTCTTTTGTATGGATATTCTGTTTTTGTAGTTAGACTAGTTTTCTTGATGAACTCAAATGCTTTATATATGTAACCACCACTGCATTCCTGGTTCCCCGAGGTCACATCGTAGTCTACAAGCTCTTGTTCTGGAAGAGACATCAATTTCCCTGTTTTTATTTTGTTGATGCCTTCAACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCATGTGTTGAAAATTCAAGACTGGTAAGTTTTTCCAAATATGACGAAATGACTTTAAATAGATAGAGGGCCAGGTTTAGGGTACTTGTTAGGAAAAAAACTCATAATCAGACGTAAAGAGAACATGATCAACGTATTTTTGTTTAGTTGGATGAATAAGAGTATTACTAGTTCGTACCACATTGGCCTTGATTCTTTATCGGGGTAATTGCACCGTCCTTTCTCCAATCAACGTTAGTAGGCAGATTAACGGTATTTTCATATTCAAATAATGTATATGGAAGCGAAAAAGTTTTATACCCCAAGTAAGTTGCCTTAAACTAATCTGTGAGATCTGCATAGTTAATTTTAACCAAAGTATATGAATGATTCAAAGAATTGAGATTGACAATGTACTTTGCTAAGAAGCACAAATACTTTAGTTTGGTTAACATGTCCATGTTCGACACTTGAAAAATTGACACTTGATAGATACGTAGCATACATTTGTCAATGCAACAAATGTATTAGACATGTGTAAGTATTTTTTGAAAAGAATATTTTAATAAACGTGGATTCATAAAGTTTTCAAATATAACAATAGCCATATTCGTGTGATATATGTATTTATGTTTTCTAGGGTGTATGTTTAGGACTTGATTTTAGAAAGAAAAAAAATGTTCCAAGTACAGTTGATTTTATAAAATTGATTTTCAAACACTAAATTCTTTTTTTATAACAAACTTAAAATTGATTTTCAATAGTTATGTTTTAAAAGTGATTTAACAGCTATCGGAATTATTAAAAATATTTTTTTGGGTATTTAAAAACTATTTAAAATAAGTTGTGATTTTTGGTTGATCACATTTTCATAATCACTAGAGAGATGATGTTTCAAAAATGATTTTTGAGTGATTTCTTGTTTTCCTAAAGTAACTTTTTATAGGCTTTCAAACACTATATTTTTATGCAAAAGTGATTTTGGTTAGTGAAAAAATATGTCAAAATCAATCCATAACACTCCTAGATAATTTGGAGTACTTACCTTTCTATATCCAACTGACAGATTTATTAGAAAAATTTCTTCATAGGGACATAAGATCATGAATTGAGATGTTTTCTATTACAACATGGTTCGTAGGCCTCAGTGGCAACTTATATATTGGAACGAAGTCATGTCTTTAATTAGAAGCTAAACAATTACCCATACAGATTCTTTCAGTTTCAACAAGAAGTCTTTACTTTAGAACTCGAAAAATAA

mRNA sequence

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTACTAGTTTTCTTGATGAACTCAAATGCTTTATATATGTAACCACCACTGCATTCCTGGTTCCCCGAGGTCACATCGTAGTCTACAAGCTCTTGTTCTGGAAGAGACATCAATTTCCCTGTTTTTATTTTGTTGATGCCTTCAACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCATGTGTTGAAAATTCAAGACTGTTTCAACAAGAAGTCTTTACTTTAGAACTCGAAAAATAA

Coding sequence (CDS)

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTACTAGTTTTCTTGATGAACTCAAATGCTTTATATATGTAACCACCACTGCATTCCTGGTTCCCCGAGGTCACATCGTAGTCTACAAGCTCTTGTTCTGGAAGAGACATCAATTTCCCTGTTTTTATTTTGTTGATGCCTTCAACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCATGTGTTGAAAATTCAAGACTGTTTCAACAAGAAGTCTTTACTTTAGAACTCGAAAAATAA

Protein sequence

MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASATSFLDELKCFIYVTTTAFLVPRGHIVVYKLLFWKRHQFPCFYFVDAFNCCYCRECPAAPCVENSRLFQQEVFTLELEK

Homology

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BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_004139374.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus] >KGN60845.1 hypothetical protein Csa_2G013260 [Cucumis sativus])

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 333

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BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_008455557.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] >XP_008455565.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo])

HSP 1 Score: 614.4 bits (1583), Expect = 2.8e-172
Identity = 317/333 (95.20%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TI NVVAALR NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           M MTDRGFIPYIKVRQ+VVEGL GIGE+ELASA
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASA 333

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BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_022140758.1 (pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia])

HSP 1 Score: 527.3 bits (1357), Expect = 4.6e-146
Identity = 273/333 (81.98%), Postives = 299/333 (89.79%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M  G T  SAFLL FH FL QYSSIH+ISPSQTLQ+SIKAAVESK YKKLPDLFPSL++A
Sbjct: 1   MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NP+ F FLST P+N  TQVVDEILQSLI +RPRS+ Q V+ SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            VLQRILHSGCVP+PQTH LLSSAWLKQR Q+KSVANIL+DM+SIGY+PDS+ICNYLISS
Sbjct: 121 SVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I ELAEA QVLK MGGAGCIPDLESYGTLI A+TAVRRT +AVELLKEMVVKVKL P
Sbjct: 181 LCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTI NVVAALR NRE+RRAVEIIELLE++SH+VGFESYELLVEGCL+CREYILAGKV 
Sbjct: 241 RQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           MGMT RGFIPYI+VRQ+VVEGLA +GEVELASA
Sbjct: 301 MGMTKRGFIPYIRVRQKVVEGLADVGEVELASA 332

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BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_022971046.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971047.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971048.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima])

HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123
Identity = 235/333 (70.57%), Postives = 266/333 (79.88%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M +G  +TS+FLL+FH FL   SS+ SI+P+QTLQ+SIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGC P PQTH LLSSAWLKQR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I ELAEAFQ                                        VVKVKL P
Sbjct: 181 LCAIDELAEAFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVKVKLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           R+GT+ NVVAALR NRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV 
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           MGMT++G+IPYI+VR +VVEGLAGIGE ELASA
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASA 333

[Close]

BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_022947166.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_022947167.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_022947168.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata])

HSP 1 Score: 448.7 bits (1153), Expect = 2.1e-122
Identity = 232/333 (69.67%), Postives = 266/333 (79.88%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M +G  +TS+FLL+FH FL Q SS+ SI+P+Q+LQ+SI+AAVESKSY+KLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP+N RT VVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVP PQTH LLSS WLKQR Q+KSVA+IL++M+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I ELAEAFQ                                        VVKVKL P
Sbjct: 181 LCAIDELAEAFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVKVKLTP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGT+ NVVAALR NRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV 
Sbjct: 241 RQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           MGMT++G+IPYI+VR +VVEGLAGIGE ELASA
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASA 333

[Close]

BLAST of CsGy2G003450 vs. TAIR10
Match: AT1G06270.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-73
Identity = 148/305 (48.52%), Postives = 193/305 (63.28%), Query Frame = 0


Query: 27  SISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEIL 86
           SIS  + ++ +IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P+PQTH LLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDL 206
           ++R  ++SVA+I+ +M+ IGY PD+  CNYL+SSLC++ +L EA                
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIXXXXXXXXXXXXXXX 206

Query: 207 ESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIE 266
                                          + PR+G +T V AALR NRE+ +A+E+IE
Sbjct: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIG 326
            +E   + V FESYE++VEGCLE REYILAGKV M MTDRGFIPYIKVRQ+VVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EVELA 332
           E +LA
Sbjct: 327 EWKLA 331

[Close]

BLAST of CsGy2G003450 vs. TAIR10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-07
Identity = 35/123 (28.46%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 148 QRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLE 207
           Q+   + V  ++ +M S+G KPD+   NYL+++ C  G L EA +V +G+ G  C P+  
Sbjct: 255 QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314

Query: 208 SYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIEL 267
           ++ TLI      R  ++   + K+ V   K+ P   T+ ++V  L  N++   A  +I  
Sbjct: 315 TFRTLIFHLCYSRLYEQGYAIFKKSVYMHKI-PDFNTLKHLVVGLVENKKRDDAKGLIRT 374

Query: 268 LER 271
           +++
Sbjct: 375 VKK 376

[Close]

BLAST of CsGy2G003450 vs. Swiss-Prot
Match: sp|Q9LNC0|PPR16_ARATH (Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX=3702 GN=At1g06270 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.0e-72
Identity = 148/305 (48.52%), Postives = 193/305 (63.28%), Query Frame = 0


Query: 27  SISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEIL 86
           SIS  + ++ +IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P+PQTH LLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDL 206
           ++R  ++SVA+I+ +M+ IGY PD+  CNYL+SSLC++ +L EA                
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIXXXXXXXXXXXXXXX 206

Query: 207 ESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIE 266
                                          + PR+G +T V AALR NRE+ +A+E+IE
Sbjct: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIG 326
            +E   + V FESYE++VEGCLE REYILAGKV M MTDRGFIPYIKVRQ+VVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EVELA 332
           E +LA
Sbjct: 327 EWKLA 331

[Close]

BLAST of CsGy2G003450 vs. Swiss-Prot
Match: sp|Q9M065|PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.8e-06
Identity = 35/123 (28.46%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 148 QRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLE 207
           Q+   + V  ++ +M S+G KPD+   NYL+++ C  G L EA +V +G+ G  C P+  
Sbjct: 255 QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314

Query: 208 SYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIEL 267
           ++ TLI      R  ++   + K+ V   K+ P   T+ ++V  L  N++   A  +I  
Sbjct: 315 TFRTLIFHLCYSRLYEQGYAIFKKSVYMHKI-PDFNTLKHLVVGLVENKKRDDAKGLIRT 374

Query: 268 LER 271
           +++
Sbjct: 375 VKK 376

[Close]

BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A0A0LFL3|A0A0A0LFL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 9.0e-183
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 333

[Close]

BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A1S3C1B6|A0A1S3C1B6_CUCME (pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN=LOC103495705 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.9e-172
Identity = 317/333 (95.20%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVANILMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TI NVVAALR NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASA 334
           M MTDRGFIPYIKVRQ+VVEGL GIGE+ELASA
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASA 333

[Close]

BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A067DSI9|A0A067DSI9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046547mg PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 193/332 (58.13%), Postives = 255/332 (76.81%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG  K+   L+NF   L Q+SS+ S+S  +TL+++++AAV++K Y+++P+L  S +EA
Sbjct: 1   MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS FP N R +V+DE+L+S I +RPRS+ +  +  LL YTLQS  P PL+L
Sbjct: 61  CQNPNPFSFLSNFPQNHRIKVIDEMLESFIPLRPRSRPKIAYDYLLSYTLQSLHPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGCVP PQ   LLSSAWL++R Q++SVA+IL++M+SIGY PD   CNYL+SS
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERRCQSQSVADILLEMKSIGYHPDCGTCNYLVSS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA +VLKGM  A C+PDLESY  +I A +  R+T+ AVE++KEMV+ + LMP
Sbjct: 181 LCAIDQLVEAAKVLKGMSSAECVPDLESYSIVIGAMSTARKTNDAVEMMKEMVLNMGLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQG +  V AALR NRE+ +AVE+IE LER    +GF+ YE++VEGCLECREYILAGK  
Sbjct: 241 RQGMVIKVAAALRANREMWKAVEMIEFLERKGCPIGFQGYEVVVEGCLECREYILAGKTV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELAS 333
           MGMT+RGFIPYIKVRQ+VVEGLAG+GE +LA+
Sbjct: 301 MGMTERGFIPYIKVRQKVVEGLAGVGEWKLAT 332

[Close]

BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|V4UCI9|V4UCI9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017507mg PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 193/332 (58.13%), Postives = 254/332 (76.51%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG  K+   L+NF   L Q+SS+ S+S  +TL+++++AAV++K Y+++P+L  S +EA
Sbjct: 1   MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS FP N R +V+DE+L+S I +RPRS+ +  +  LL YTLQS  P PL+L
Sbjct: 61  CQNPNPFSFLSNFPQNHRIKVIDEMLESFIPLRPRSRPKIAYDYLLSYTLQSLHPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGCVP PQ   LLSSAWL++R Q++SVA+IL++M+SIGY PD   CNYL+SS
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERRCQSQSVADILLEMKSIGYHPDCGTCNYLVSS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA +VLKGM    CIPDLESY  +I A +  R+T+ AVE++KEMV+ + LMP
Sbjct: 181 LCAIDQLVEAAKVLKGMSNVECIPDLESYSIVIGAMSTARKTNDAVEMMKEMVLNMGLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQG +  V AALR NRE+ +AVE+I+ LER    +GF+ YE++VEGCLECREYILAGK  
Sbjct: 241 RQGMVIKVAAALRANREMWKAVEMIKFLERKGCPIGFQGYEVVVEGCLECREYILAGKTV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELAS 333
           MGMT+RGFIPYIKVRQ+VVEGLAG+GE +LAS
Sbjct: 301 MGMTERGFIPYIKVRQKVVEGLAGVGEWKLAS 332

[Close]

BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A2H5QQA1|A0A2H5QQA1_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_251680 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103
Identity = 193/332 (58.13%), Postives = 253/332 (76.20%), Query Frame = 0


Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M IG  K+   L+NF   L Q+SS+ S+S  +TL+++++AAV++K Y+++P+L  S +EA
Sbjct: 1   MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLS FP N R +V+DE+L S I +RPRS+ +  +  LL YTLQS  P PL+L
Sbjct: 61  CQNPNPFSFLSNFPQNHRIKVIDEMLDSFIPLRPRSRPKIAYDYLLLYTLQSLHPLPLAL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180
            +LQR L SGCVP PQ   LLSSAWL++  Q++SVA+IL++M+SIGY PD   CNYL+SS
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERMCQSQSVADILLEMKSIGYHPDCGTCNYLVSS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I +L EA +VLKGM  A C+PDLESY  +I A +  R+T+ AVE++KEMV+ + LMP
Sbjct: 181 LCAIDQLVEAAKVLKGMSSAECVPDLESYRIVIGAMSTARKTNDAVEMMKEMVLNMGLMP 240

Query: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300
           RQG +  V AALR NRE+ +AVE+IE LER    +GF+ YE++VEGCLECREYILAGK  
Sbjct: 241 RQGMVIKVAAALRANREMWKAVEMIEFLERKGCPIGFQGYEVVVEGCLECREYILAGKTV 300

Query: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELAS 333
           MGMT+RGFIPYIKVRQ+VVEGLAG+GE +LAS
Sbjct: 301 MGMTERGFIPYIKVRQKVVEGLAGVGEWKLAS 332

The following BLAST results are available for this feature:

BLAST of CsGy2G003450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139374.1	1.4e-182	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativu...	[more]
XP_008455557.1	2.8e-172	95.20	PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] ...	[more]
XP_022140758.1	4.6e-146	81.98	pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]	[more]
XP_022971046.1	1.4e-123	70.57	pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022...	[more]
XP_022947166.1	2.1e-122	69.67	pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_0...	[more]

BLAST of CsGy2G003450 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06270.1	1.7e-73	48.52	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G36680.1	1.6e-07	28.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy2G003450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LNC0\|PPR16_ARATH	3.0e-72	48.52	Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9M065\|PP352_ARATH	2.8e-06	28.46	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy2G003450 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFL3\|A0A0A0LFL3_CUCSA	9.0e-183	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1	[more]
tr\|A0A1S3C1B6\|A0A1S3C1B6_CUCME	1.9e-172	95.20	pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A067DSI9\|A0A067DSI9_CITSI	3.7e-104	58.13	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046547mg PE=4 SV=1	[more]
tr\|V4UCI9\|V4UCI9_9ROSI	1.1e-103	58.13	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017507mg PE=4 ...	[more]
tr\|A0A2H5QQA1\|A0A2H5QQA1_CITUN	1.4e-103	58.13	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_251680 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003450.1	CsGy2G003450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 117..285 e-value: 1.2E-24 score: 89.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 208..233 e-value: 0.0017 score: 16.4 coord: 173..205 e-value: 1.0E-5 score: 23.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 169..215 e-value: 1.7E-7 score: 31.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 134..169 score: 5.93
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 205..235 score: 8.177
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 170..204 score: 10.216
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 6.785
None	No IPR available	PANTHER	PTHR24015:SF925	SUBFAMILY NOT NAMED	coord: 7..333
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 7..333

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003450	Csa2G013260	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003450	MELO3C004341	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003450	CSPI02G03350	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003450	MELO3C004341.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003450	CsaV3_2G004500	Cucumber (Chinese Long) v3	cgybcucB064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003450	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003450	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003450	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003450	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003450	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003450	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003450	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003450	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003450	Watermelon (97103) v1	cgybwmB140
CsGy2G003450	Silver-seed gourd	carcgybB0310
CsGy2G003450	Silver-seed gourd	carcgybB0713
CsGy2G003450	Watermelon (97103) v2	cgybwmbB114
CsGy2G003450	Wax gourd	cgybwgoB133