Csa1G555620 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAAATGTCTATTGTGAGAGAAGAAATGAAAGGAAAAGCAGAAGTATACCATGGAGATGAGTTATGTCAAGAGAAATCCAAACAAATACTGAAAGAGGTAGGGCTTCCAAATGGGCTTTTACCATTGAAAGACATAGAAGAATGTGGGATATTGAGAGAAACAGGGTTTGTTTGGATAAAGCAAAAGAAAAGCACAACTCATAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCAAATGAAGTGACAGCCATTGTAGAGAAGAACAAAATCAAGAAACTTACTGGAGTTAAGACTAAGGAGCTTTTGGTTTGGGTTTCATTAAGTGATATTTATGTTGATGAACCACCTAGTGGGAAAATTTCTTTCCAAACACCAACAGGGCTATTTAGAACTTTTCCTGTCTCAGCTTTTCAAGTTCAAGACCATGTCAAGGAGGTTTAG ATGTCTATTGTGAGAGAAGAAATGAAAGGAAAAGCAGAAGTATACCATGGAGATGAGTTATGTCAAGAGAAATCCAAACAAATACTGAAAGAGGTAGGGCTTCCAAATGGGCTTTTACCATTGAAAGACATAGAAGAATGTGGGATATTGAGAGAAACAGGGTTTGTTTGGATAAAGCAAAAGAAAAGCACAACTCATAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCAAATGAAGTGACAGCCATTGTAGAGAAGAACAAAATCAAGAAACTTACTGGAGTTAAGACTAAGGAGCTTTTGGTTTGGGTTTCATTAAGTGATATTTATGTTGATGAACCACCTAGTGGGAAAATTTCTTTCCAAACACCAACAGGGCTATTTAGAACTTTTCCTGTCTCAGCTTTTCAAGTTCAAGACCATGTCAAGGAGGTTTAG ATGTCTATTGTGAGAGAAGAAATGAAAGGAAAAGCAGAAGTATACCATGGAGATGAGTTATGTCAAGAGAAATCCAAACAAATACTGAAAGAGGTAGGGCTTCCAAATGGGCTTTTACCATTGAAAGACATAGAAGAATGTGGGATATTGAGAGAAACAGGGTTTGTTTGGATAAAGCAAAAGAAAAGCACAACTCATAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCAAATGAAGTGACAGCCATTGTAGAGAAGAACAAAATCAAGAAACTTACTGGAGTTAAGACTAAGGAGCTTTTGGTTTGGGTTTCATTAAGTGATATTTATGTTGATGAACCACCTAGTGGGAAAATTTCTTTCCAAACACCAACAGGGCTATTTAGAACTTTTCCTGTCTCAGCTTTTCAAGTTCAAGACCATGTCAAGGAGGTTTAG MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKISFQTPTGLFRTFPVSAFQVQDHVKEV*
BLAST of Csa1G555620 vs. TrEMBL
Match: A0A0A0LYR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555620 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Csa1G555620 vs. TrEMBL
Match: A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 5.1e-66 Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1
BLAST of Csa1G555620 vs. TrEMBL
Match: I1LB31_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G145900 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.4e-61 Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Csa1G555620 vs. TrEMBL
Match: C6T1Q2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.4e-61 Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Csa1G555620 vs. TrEMBL
Match: A0A0B2Q409_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_012021 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.4e-61 Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Csa1G555620 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538) HSP 1 Score: 193.4 bits (490), Expect = 1.0e-49 Identity = 95/142 (66.90%), Postives = 115/142 (80.99%), Query Frame = 1
BLAST of Csa1G555620 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538) HSP 1 Score: 191.0 bits (484), Expect = 5.0e-49 Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 1
BLAST of Csa1G555620 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538) HSP 1 Score: 138.7 bits (348), Expect = 3.0e-33 Identity = 62/134 (46.27%), Postives = 96/134 (71.64%), Query Frame = 1
BLAST of Csa1G555620 vs. TAIR10
Match: AT5G49600.1 (AT5G49600.1 Protein of unknown function, DUF538) HSP 1 Score: 131.3 bits (329), Expect = 4.7e-31 Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = 1
BLAST of Csa1G555620 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-30 Identity = 62/139 (44.60%), Postives = 96/139 (69.06%), Query Frame = 1
BLAST of Csa1G555620 vs. NCBI nr
Match: gi|778662131|ref|XP_004135756.2| (PREDICTED: uncharacterized protein LOC101222618 [Cucumis sativus]) HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Csa1G555620 vs. NCBI nr
Match: gi|659099306|ref|XP_008450533.1| (PREDICTED: uncharacterized protein LOC103492107 [Cucumis melo]) HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72 Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 1
BLAST of Csa1G555620 vs. NCBI nr
Match: gi|778659689|ref|XP_004139521.2| (PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus]) HSP 1 Score: 258.5 bits (659), Expect = 7.3e-66 Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1
BLAST of Csa1G555620 vs. NCBI nr
Match: gi|700209917|gb|KGN65013.1| (hypothetical protein Csa_1G181260 [Cucumis sativus]) HSP 1 Score: 258.5 bits (659), Expect = 7.3e-66 Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1
BLAST of Csa1G555620 vs. NCBI nr
Match: gi|659128666|ref|XP_008464314.1| (PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65 Identity = 124/145 (85.52%), Postives = 138/145 (95.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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