MELO3C013413 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTAAGCAAGGTTTTTACTGAGAAGACCACATTAGTTGAGAAAGAGACAGATCATGAAGTTGTCTCCAAAGAGGAAGCCTGTGAATTTTTGAAATTAATTAAGCAGAGTGATTGTTTATATTTAAAGTGATTGAACAATTACATCGTACCCCAGCTCGTATATCGATGTTGTCACTATTCATGTGCTCTGAATCGCACCGCAAGGTTTTGTTGGATATCTTAAATAGAGCCTATGTAGGGCATGATATTTCAGTGAATGCACTTAGTGAAATCATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT*
BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55 Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1
BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 7.6e-06 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1
HSP 2 Score: 213.0 bits (541), Expect = 4.1e-52 Identity = 105/178 (58.99%), Postives = 128/178 (71.91%), Query Frame = 1
BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061ESA1_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1
HSP 2 Score: 211.1 bits (536), Expect = 1.6e-51 Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 1
BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061E733_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1) HSP 1 Score: 33.1 bits (74), Expect = 5.8e+02 Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 1
HSP 2 Score: 210.7 bits (535), Expect = 2.0e-51 Identity = 100/178 (56.18%), Postives = 131/178 (73.60%), Query Frame = 1
BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061E378_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51 Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 1
BLAST of MELO3C013413 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo]) HSP 1 Score: 349.4 bits (895), Expect = 5.3e-93 Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 1
BLAST of MELO3C013413 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33 Identity = 75/97 (77.32%), Postives = 80/97 (82.47%), Query Frame = 1
HSP 2 Score: 223.0 bits (567), Expect = 5.7e-55 Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1
BLAST of MELO3C013413 vs. NCBI nr
Match: gi|590636870|ref|XP_007028966.1| (Uncharacterized protein TCM_024883 [Theobroma cacao]) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1
HSP 2 Score: 219.9 bits (559), Expect = 4.8e-54 Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 1
BLAST of MELO3C013413 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]) HSP 1 Score: 133.7 bits (335), Expect = 4.5e-28 Identity = 64/75 (85.33%), Postives = 69/75 (92.00%), Query Frame = 1
HSP 2 Score: 217.6 bits (553), Expect = 2.4e-53 Identity = 104/177 (58.76%), Postives = 136/177 (76.84%), Query Frame = 1
BLAST of MELO3C013413 vs. NCBI nr
Match: gi|955360841|ref|XP_014621685.1| (PREDICTED: uncharacterized protein LOC106795609, partial [Glycine max]) HSP 1 Score: 215.7 bits (548), Expect = 9.1e-53 Identity = 101/173 (58.38%), Postives = 136/173 (78.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |