MELO3C013413T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013413T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, unclassified
Location	chr1 : 16679980 .. 16681049 (+)
Sequence length	738

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTAAGCAAGGTTTTTACTGAGAAGACCACATTAGTTGAGAAAGAGACAGATCATGAAGTTGTCTCCAAAGAGGAAGCCTGTGAATTTTTGAAATTAATTAAGCAGAGTGATTGTTTATATTTAAAGTGATTGAACAATTACATCGTACCCCAGCTCGTATATCGATGTTGTCACTATTCATGTGCTCTGAATCGCACCGCAAGGTTTTGTTGGATATCTTAAATAGAGCCTATGTAGGGCATGATATTTCAGTGAATGCACTTAGTGAAATCATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

mRNA sequence

ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

Coding sequence (CDS)

ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

Protein sequence

MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT*

Homology

[Close]

BLAST of MELO3C013413T1 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55
Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIPP G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KLL+D S
Sbjct: 1460 GNFIAFNDEEIPPGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLLVDVS 1519

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+RPS MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1520 YMRPSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1579

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 1580 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 1637

[Close]

BLAST of MELO3C013413T1 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.6e-06
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 1    MTVEIPGPFAYKDNHVVPWKYECQFI--TDNVVSAT------IGGITRSGRCYTPDNLKD 56
            +T+E+P PF YK++  VPW YEC  +    +   A+      +GGITRSGRCY+P+  + 
Sbjct: 1288 ITIEVPSPFPYKNDKAVPWNYECNILGTASSAPQASFEDITGVGGITRSGRCYSPEVAER 1347

HSP 2 Score: 213.0 bits (541), Expect = 4.1e-52
Identity = 105/178 (58.99%), Postives = 128/178 (71.91%), Query Frame = 1


Query: 64  GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
           G  I   D+EIP  G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KL +D S
Sbjct: 611 GNFIAFNDEEIPSGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVS 670

Query: 124 YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
           Y+R S MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 671 YMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 730

Query: 184 AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
           AVPSSLHQ++KF  +G    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 731 AVPSSLHQKVKFIAKGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 788

[Close]

BLAST of MELO3C013413T1 vs. TrEMBL
Match: A0A061ESA1_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 1   MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSAT---------IGGITRSGRCYTPDNLK 57
           +T+E+P PF YK +  VPW Y+C  I+    SA          +GGITRSGRCY+P+  +
Sbjct: 439 ITIEVPNPFPYKSDKAVPWNYQCN-ISGTASSAPQASFEDLTGVGGITRSGRCYSPEVAE 498

HSP 2 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIP  G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KL +D S
Sbjct: 1108 GNFIAFNDEEIPSGGRGGNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVS 1167

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+R S MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1168 YMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1227

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA E   ECS+RSFE  NAT
Sbjct: 1228 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEVVPECSFRSFEFVNAT 1285

[Close]

BLAST of MELO3C013413T1 vs. TrEMBL
Match: A0A061E733_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 5.8e+02
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 1


Query: 35  IGGITRSGRCYTPDNLKDVSK 56
           +GGITRSGRCY+P+  + V K
Sbjct: 978 VGGITRSGRCYSPEVAERVGK 998

HSP 2 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 100/178 (56.18%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 64  GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
           G  I  +D+EIP  G G+ K LHI+ K K   VA+VL+DNGSSLN++   TL +L I+ S
Sbjct: 93  GNIISFSDEEIPSGGRGNYKALHITTKCKGCTVAKVLLDNGSSLNVMPMRTLARLPINMS 152

Query: 124 YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
           Y+R S M+V  FDG RREV+GDI+IP++IGP TF + FQVMD+  SY++LLG+PWIH AG
Sbjct: 153 YMRKSQMIVRAFDGTRREVVGDIEIPVEIGPCTFTIEFQVMDIAPSYNYLLGRPWIHMAG 212

Query: 184 AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
           A+PSSLHQ++KF +EG    V GE+D+ ++K +  PYVEA EE  ECS+RSFE  N T
Sbjct: 213 AIPSSLHQKVKFIVEGKIVCVNGEEDLLISKPADTPYVEAAEEVPECSFRSFEFVNTT 270

[Close]

BLAST of MELO3C013413T1 vs. TrEMBL
Match: A0A061E378_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIP  G    K LHI++K KDH V RVLVDNGS+LN++ RSTL KL +D S
Sbjct: 1534 GNFIAFNDEEIPSGGRRGNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVS 1593

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+R S MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1594 YMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1653

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 1654 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 1711

[Close]

BLAST of MELO3C013413T1 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 5.3e-93
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 1


Query: 67  IEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 126
           I   DKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR
Sbjct: 175 IFFTDKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 234

Query: 127 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 186
           PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP
Sbjct: 235 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 294

Query: 187 SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT 246
           SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
Sbjct: 295 SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT 353

[Close]

BLAST of MELO3C013413T1 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo])

HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33
Identity = 75/97 (77.32%), Postives = 80/97 (82.47%), Query Frame = 1


Query: 1  MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR 60
          MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR
Sbjct: 1  MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR 60

Query: 61 RRKGKAIEMA-DKEIPPKGTGHTKTLHISVKVKDHHV 97
          RRKGKAIEMA + ++       T+   +  K  DH V
Sbjct: 61 RRKGKAIEMAGEDDLNDLSKVFTEKTTLVEKETDHEV 97

HSP 2 Score: 223.0 bits (567), Expect = 5.7e-55
Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIPP G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KLL+D S
Sbjct: 1460 GNFIAFNDEEIPPGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLLVDVS 1519

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+RPS MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1520 YMRPSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1579

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 1580 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 1637

[Close]

BLAST of MELO3C013413T1 vs. NCBI nr
Match: gi|590636870|ref|XP_007028966.1| (Uncharacterized protein TCM_024883 [Theobroma cacao])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 1    MTVEIPGPFAYKDNHVVPWKYECQFI--TDNVVSAT------IGGITRSGRCYTPDNLKD 56
            +T+E+P PF YK++  VPW YEC  +    +   A+      +GGITRSGRCY+P+  + 
Sbjct: 1288 ITIEVPSPFPYKNDKAVPWNYECNILGTASSAPQASFEDITGVGGITRSGRCYSPEVAER 1347

HSP 2 Score: 219.9 bits (559), Expect = 4.8e-54
Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 1


Query: 67  IEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 126
           I   D+EI P+GTGHTK LHISVK KD +VARVLVDNG SLNI+SRSTLMKLLIDPSYLR
Sbjct: 705 ISFTDEEIFPEGTGHTKALHISVKCKDQYVARVLVDNGLSLNIMSRSTLMKLLIDPSYLR 764

Query: 127 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 186
           PSTMVV  FD ARREVIGDIDIPLKIGPSTFN+ FQVMD+NS YS+LLG+PWI+SAG V 
Sbjct: 765 PSTMVVRAFDCARREVIGDIDIPLKIGPSTFNILFQVMDINSLYSYLLGRPWIYSAGVVS 824

Query: 187 SSLHQRLKFSIEGGQ 202
           SSLHQRLKFS+EGG+
Sbjct: 825 SSLHQRLKFSVEGGR 839

[Close]

BLAST of MELO3C013413T1 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo])

HSP 1 Score: 133.7 bits (335), Expect = 4.5e-28
Identity = 64/75 (85.33%), Postives = 69/75 (92.00%), Query Frame = 1


Query: 1   MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR 60
           MT+EIP PFAYKDNHVVPWKYECQFIT+NVVS T+ G+TRSGRCYT  NLKDVSKEDEVR
Sbjct: 549 MTIEIPSPFAYKDNHVVPWKYECQFITNNVVSTTVEGLTRSGRCYTLANLKDVSKEDEVR 608

Query: 61  RRKGKAIEMA-DKEI 75
           RRKGKAIEMA +KEI
Sbjct: 609 RRKGKAIEMAVEKEI 623

HSP 2 Score: 217.6 bits (553), Expect = 2.4e-53
Identity = 104/177 (58.76%), Postives = 136/177 (76.84%), Query Frame = 1


Query: 66  AIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYL 125
           +I   D EIPP+G GHTK LHI VK KD+ +ARVLVDNG +LNI+ +STL+KL +D S++
Sbjct: 577 SIVFTDDEIPPEGLGHTKALHIQVKCKDYVIARVLVDNGLALNIMPKSTLLKLPVDMSHI 636

Query: 126 RPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAV 185
           + STMV+  FDG+RREV+GDI++P+KI P  FN+ FQVM++  +YSFLLG+PWI SAG V
Sbjct: 637 KSSTMVLKAFDGSRREVMGDIELPVKIDPCIFNIVFQVMEITPTYSFLLGRPWIPSAGVV 696

Query: 186 PSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATI 243
           PS+LHQ+ KF +      V GE+D  +TK  + PYVEA EEALECS+  FEIA+AT+
Sbjct: 697 PSTLHQKRKFIVGSKLIYVMGEEDFLITKPISTPYVEATEEALECSFHYFEIAHATM 753

[Close]

BLAST of MELO3C013413T1 vs. NCBI nr
Match: gi|955360841|ref|XP_014621685.1| (PREDICTED: uncharacterized protein LOC106795609, partial [Glycine max])

HSP 1 Score: 215.7 bits (548), Expect = 9.1e-53
Identity = 101/173 (58.38%), Postives = 136/173 (78.61%), Query Frame = 1


Query: 67  IEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 126
           +  A++EIP +G GH K LH+SVK  DH VA+VL+DNGSSLN++ +STL KL  + S+L+
Sbjct: 227 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 286

Query: 127 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 186
           PS+MVV  FDG RREV G+ID+P++IGP T  V+FQ+MD+N  YS LLG+PWIHS G VP
Sbjct: 287 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 346

Query: 187 SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIAN 240
           S+LHQ+LKF +EG   IV GE+D+ V+  S++PYVEA EE+LE +++SFE+ N
Sbjct: 347 STLHQKLKFVVEGHLVIVSGEEDILVSCPSSMPYVEAAEESLETAFQSFEVVN 399

The following BLAST results are available for this feature:

BLAST of MELO3C013413T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061EXR3_THECC	4.0e-55	60.67	Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1	[more]
A0A061EXR3_THECC	7.6e-06	42.86	Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1	[more]
A0A061ESA1_THECC	3.4e-06	44.62	Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1	[more]
A0A061E733_THECC	5.8e+02	61.90	Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1	[more]
A0A061E378_THECC	2.0e-51	58.43	Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1	[more]

BLAST of MELO3C013413T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094545\|ref\|XP_008448120.1\|	5.3e-93	98.32	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis me...	[more]
gi\|659094545\|ref\|XP_008448120.1\|	3.6e-33	77.32	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis me...	[more]
gi\|590636870\|ref\|XP_007028966.1\|	1.1e-05	42.86	Uncharacterized protein TCM_024883 [Theobroma cacao]	[more]
gi\|659122237\|ref\|XP_008461036.1\|	4.5e-28	85.33	PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]	[more]
gi\|955360841\|ref\|XP_014621685.1\|	9.1e-53	58.38	PREDICTED: uncharacterized protein LOC106795609, partial [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR021109	Peptidase_aspartic_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C013413	MELO3C013413	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C013413T1	MELO3C013413T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013413T1.cds1	MELO3C013413T1.cds1	CDS
MELO3C013413T1.cds2	MELO3C013413T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain	unknown	SSF50630	Acid proteases	coord: 83..183 score: 1.4
None	No IPR available	PANTHER	PTHR33240	FAMILY NOT NAMED	coord: 85..230 score: 2.1
None	No IPR available	PANTHER	PTHR33240:SF1	SUBFAMILY NOT NAMED	coord: 85..230 score: 2.1
None	No IPR available	PFAM	PF13650	Asp_protease_2	coord: 87..178 score: 2.