MELO3C013413 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013413
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, unclassified
Location	chr1 : 16679980 .. 16681049 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTAAGCAAGGTTTTTACTGAGAAGACCACATTAGTTGAGAAAGAGACAGATCATGAAGTTGTCTCCAAAGAGGAAGCCTGTGAATTTTTGAAATTAATTAAGCAGAGTGATTGTTTATATTTAAAGTGATTGAACAATTACATCGTACCCCAGCTCGTATATCGATGTTGTCACTATTCATGTGCTCTGAATCGCACCGCAAGGTTTTGTTGGATATCTTAAATAGAGCCTATGTAGGGCATGATATTTCAGTGAATGCACTTAGTGAAATCATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

mRNA sequence

ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

Coding sequence (CDS)

ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAATCGGAGGAATAACTCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCTCAAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGGTTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAACCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAGTTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

Protein sequence

MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT*

Homology

[Close]

BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55
Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIPP G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KLL+D S
Sbjct: 1460 GNFIAFNDEEIPPGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLLVDVS 1519

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+RPS MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1520 YMRPSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1579

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 1580 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 1637

[Close]

BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.6e-06
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 1    MTVEIPGPFAYKDNHVVPWKYECQFI--TDNVVSAT------IGGITRSGRCYTPDNLKD 56
            +T+E+P PF YK++  VPW YEC  +    +   A+      +GGITRSGRCY+P+  + 
Sbjct: 1288 ITIEVPSPFPYKNDKAVPWNYECNILGTASSAPQASFEDITGVGGITRSGRCYSPEVAER 1347

HSP 2 Score: 213.0 bits (541), Expect = 4.1e-52
Identity = 105/178 (58.99%), Postives = 128/178 (71.91%), Query Frame = 1


Query: 64  GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
           G  I   D+EIP  G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KL +D S
Sbjct: 611 GNFIAFNDEEIPSGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVS 670

Query: 124 YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
           Y+R S MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 671 YMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 730

Query: 184 AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
           AVPSSLHQ++KF  +G    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 731 AVPSSLHQKVKFIAKGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 788

[Close]

BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061ESA1_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 1   MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSAT---------IGGITRSGRCYTPDNLK 57
           +T+E+P PF YK +  VPW Y+C  I+    SA          +GGITRSGRCY+P+  +
Sbjct: 439 ITIEVPNPFPYKSDKAVPWNYQCN-ISGTASSAPQASFEDLTGVGGITRSGRCYSPEVAE 498

HSP 2 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIP  G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KL +D S
Sbjct: 1108 GNFIAFNDEEIPSGGRGGNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVS 1167

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+R S MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1168 YMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1227

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA E   ECS+RSFE  NAT
Sbjct: 1228 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEVVPECSFRSFEFVNAT 1285

[Close]

BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061E733_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 5.8e+02
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 1


Query: 35  IGGITRSGRCYTPDNLKDVSK 56
           +GGITRSGRCY+P+  + V K
Sbjct: 978 VGGITRSGRCYSPEVAERVGK 998

HSP 2 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 100/178 (56.18%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 64  GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
           G  I  +D+EIP  G G+ K LHI+ K K   VA+VL+DNGSSLN++   TL +L I+ S
Sbjct: 93  GNIISFSDEEIPSGGRGNYKALHITTKCKGCTVAKVLLDNGSSLNVMPMRTLARLPINMS 152

Query: 124 YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
           Y+R S M+V  FDG RREV+GDI+IP++IGP TF + FQVMD+  SY++LLG+PWIH AG
Sbjct: 153 YMRKSQMIVRAFDGTRREVVGDIEIPVEIGPCTFTIEFQVMDIAPSYNYLLGRPWIHMAG 212

Query: 184 AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
           A+PSSLHQ++KF +EG    V GE+D+ ++K +  PYVEA EE  ECS+RSFE  N T
Sbjct: 213 AIPSSLHQKVKFIVEGKIVCVNGEEDLLISKPADTPYVEAAEEVPECSFRSFEFVNTT 270

[Close]

BLAST of MELO3C013413 vs. TrEMBL
Match: A0A061E378_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIP  G    K LHI++K KDH V RVLVDNGS+LN++ RSTL KL +D S
Sbjct: 1534 GNFIAFNDEEIPSGGRRGNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVS 1593

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+R S MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1594 YMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1653

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 1654 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 1711

[Close]

BLAST of MELO3C013413 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 5.3e-93
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 1


Query: 67  IEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 126
           I   DKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR
Sbjct: 175 IFFTDKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 234

Query: 127 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 186
           PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP
Sbjct: 235 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 294

Query: 187 SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT 246
           SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
Sbjct: 295 SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT 353

[Close]

BLAST of MELO3C013413 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo])

HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33
Identity = 75/97 (77.32%), Postives = 80/97 (82.47%), Query Frame = 1


Query: 1  MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR 60
          MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR
Sbjct: 1  MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR 60

Query: 61 RRKGKAIEMA-DKEIPPKGTGHTKTLHISVKVKDHHV 97
          RRKGKAIEMA + ++       T+   +  K  DH V
Sbjct: 61 RRKGKAIEMAGEDDLNDLSKVFTEKTTLVEKETDHEV 97

HSP 2 Score: 223.0 bits (567), Expect = 5.7e-55
Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 64   GKAIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPS 123
            G  I   D+EIPP G G  K LHI++K KDH V RVLVDNGS+LN++ RSTL KLL+D S
Sbjct: 1460 GNFIAFNDEEIPPGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLLVDVS 1519

Query: 124  YLRPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAG 183
            Y+RPS MVV  FDG  REV+GDI++P+KIGP  F V FQVMD+  SY+ LLG+PWIH AG
Sbjct: 1520 YMRPSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAG 1579

Query: 184  AVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANAT 242
            A+PSSLHQ++KF  EG    V  E+D+   + S+ PYVEA EE  ECS+RSFE  NAT
Sbjct: 1580 AIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNAT 1637

[Close]

BLAST of MELO3C013413 vs. NCBI nr
Match: gi|590636870|ref|XP_007028966.1| (Uncharacterized protein TCM_024883 [Theobroma cacao])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 1    MTVEIPGPFAYKDNHVVPWKYECQFI--TDNVVSAT------IGGITRSGRCYTPDNLKD 56
            +T+E+P PF YK++  VPW YEC  +    +   A+      +GGITRSGRCY+P+  + 
Sbjct: 1288 ITIEVPSPFPYKNDKAVPWNYECNILGTASSAPQASFEDITGVGGITRSGRCYSPEVAER 1347

HSP 2 Score: 219.9 bits (559), Expect = 4.8e-54
Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 1


Query: 67  IEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 126
           I   D+EI P+GTGHTK LHISVK KD +VARVLVDNG SLNI+SRSTLMKLLIDPSYLR
Sbjct: 705 ISFTDEEIFPEGTGHTKALHISVKCKDQYVARVLVDNGLSLNIMSRSTLMKLLIDPSYLR 764

Query: 127 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 186
           PSTMVV  FD ARREVIGDIDIPLKIGPSTFN+ FQVMD+NS YS+LLG+PWI+SAG V 
Sbjct: 765 PSTMVVRAFDCARREVIGDIDIPLKIGPSTFNILFQVMDINSLYSYLLGRPWIYSAGVVS 824

Query: 187 SSLHQRLKFSIEGGQ 202
           SSLHQRLKFS+EGG+
Sbjct: 825 SSLHQRLKFSVEGGR 839

[Close]

BLAST of MELO3C013413 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo])

HSP 1 Score: 133.7 bits (335), Expect = 4.5e-28
Identity = 64/75 (85.33%), Postives = 69/75 (92.00%), Query Frame = 1


Query: 1   MTVEIPGPFAYKDNHVVPWKYECQFITDNVVSATIGGITRSGRCYTPDNLKDVSKEDEVR 60
           MT+EIP PFAYKDNHVVPWKYECQFIT+NVVS T+ G+TRSGRCYT  NLKDVSKEDEVR
Sbjct: 549 MTIEIPSPFAYKDNHVVPWKYECQFITNNVVSTTVEGLTRSGRCYTLANLKDVSKEDEVR 608

Query: 61  RRKGKAIEMA-DKEI 75
           RRKGKAIEMA +KEI
Sbjct: 609 RRKGKAIEMAVEKEI 623

HSP 2 Score: 217.6 bits (553), Expect = 2.4e-53
Identity = 104/177 (58.76%), Postives = 136/177 (76.84%), Query Frame = 1


Query: 66  AIEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYL 125
           +I   D EIPP+G GHTK LHI VK KD+ +ARVLVDNG +LNI+ +STL+KL +D S++
Sbjct: 577 SIVFTDDEIPPEGLGHTKALHIQVKCKDYVIARVLVDNGLALNIMPKSTLLKLPVDMSHI 636

Query: 126 RPSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAV 185
           + STMV+  FDG+RREV+GDI++P+KI P  FN+ FQVM++  +YSFLLG+PWI SAG V
Sbjct: 637 KSSTMVLKAFDGSRREVMGDIELPVKIDPCIFNIVFQVMEITPTYSFLLGRPWIPSAGVV 696

Query: 186 PSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATI 243
           PS+LHQ+ KF +      V GE+D  +TK  + PYVEA EEALECS+  FEIA+AT+
Sbjct: 697 PSTLHQKRKFIVGSKLIYVMGEEDFLITKPISTPYVEATEEALECSFHYFEIAHATM 753

[Close]

BLAST of MELO3C013413 vs. NCBI nr
Match: gi|955360841|ref|XP_014621685.1| (PREDICTED: uncharacterized protein LOC106795609, partial [Glycine max])

HSP 1 Score: 215.7 bits (548), Expect = 9.1e-53
Identity = 101/173 (58.38%), Postives = 136/173 (78.61%), Query Frame = 1


Query: 67  IEMADKEIPPKGTGHTKTLHISVKVKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLR 126
           +  A++EIP +G GH K LH+SVK  DH VA+VL+DNGSSLN++ +STL KL  + S+L+
Sbjct: 227 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 286

Query: 127 PSTMVVTTFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYSFLLGQPWIHSAGAVP 186
           PS+MVV  FDG RREV G+ID+P++IGP T  V+FQ+MD+N  YS LLG+PWIHS G VP
Sbjct: 287 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 346

Query: 187 SSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIAN 240
           S+LHQ+LKF +EG   IV GE+D+ V+  S++PYVEA EE+LE +++SFE+ N
Sbjct: 347 STLHQKLKFVVEGHLVIVSGEEDILVSCPSSMPYVEAAEESLETAFQSFEVVN 399

The following BLAST results are available for this feature:

BLAST of MELO3C013413 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061EXR3_THECC	4.0e-55	60.67	Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1	[more]
A0A061EXR3_THECC	7.6e-06	42.86	Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1	[more]
A0A061ESA1_THECC	3.4e-06	44.62	Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1	[more]
A0A061E733_THECC	5.8e+02	61.90	Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1	[more]
A0A061E378_THECC	2.0e-51	58.43	Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1	[more]

BLAST of MELO3C013413 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094545\|ref\|XP_008448120.1\|	5.3e-93	98.32	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis me...	[more]
gi\|659094545\|ref\|XP_008448120.1\|	3.6e-33	77.32	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis me...	[more]
gi\|590636870\|ref\|XP_007028966.1\|	1.1e-05	42.86	Uncharacterized protein TCM_024883 [Theobroma cacao]	[more]
gi\|659122237\|ref\|XP_008461036.1\|	4.5e-28	85.33	PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]	[more]
gi\|955360841\|ref\|XP_014621685.1\|	9.1e-53	58.38	PREDICTED: uncharacterized protein LOC106795609, partial [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021109	Peptidase_aspartic_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013413T1	MELO3C013413T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain	unknown	SSF50630	Acid proteases	coord: 83..183 score: 1.4
None	No IPR available	PANTHER	PTHR33240	FAMILY NOT NAMED	coord: 85..230 score: 2.1
None	No IPR available	PANTHER	PTHR33240:SF1	SUBFAMILY NOT NAMED	coord: 85..230 score: 2.1
None	No IPR available	PFAM	PF13650	Asp_protease_2	coord: 87..178 score: 2.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013413	Cucurbita pepo (Zucchini)	cpemeB224
MELO3C013413	Cucurbita pepo (Zucchini)	cpemeB272
MELO3C013413	Cucurbita pepo (Zucchini)	cpemeB605
MELO3C013413	Cucurbita pepo (Zucchini)	cpemeB684
MELO3C013413	Cucurbita pepo (Zucchini)	cpemeB746
MELO3C013413	Bottle gourd (USVL1VR-Ls)	lsimeB064
MELO3C013413	Bottle gourd (USVL1VR-Ls)	lsimeB096
MELO3C013413	Bottle gourd (USVL1VR-Ls)	lsimeB467
MELO3C013413	Cucumber (Gy14) v2	cgybmeB088
MELO3C013413	Cucumber (Gy14) v2	cgybmeB092
MELO3C013413	Cucumber (Gy14) v2	cgybmeB469
MELO3C013413	Silver-seed gourd	carmeB0218
MELO3C013413	Silver-seed gourd	carmeB0321
MELO3C013413	Silver-seed gourd	carmeB0952
MELO3C013413	Cucumber (Chinese Long) v3	cucmeB106
MELO3C013413	Cucumber (Chinese Long) v3	cucmeB110
MELO3C013413	Cucumber (Chinese Long) v3	cucmeB549
MELO3C013413	Watermelon (97103) v2	mewmbB176
MELO3C013413	Watermelon (97103) v2	mewmbB179
MELO3C013413	Watermelon (97103) v2	mewmbB207
MELO3C013413	Wax gourd	mewgoB213
MELO3C013413	Wax gourd	mewgoB229
MELO3C013413	Wax gourd	mewgoB231
MELO3C013413	Melon (DHL92) v3.5.1	memeB080
MELO3C013413	Cucumber (Gy14) v1	cgymeB274
MELO3C013413	Cucurbita maxima (Rimu)	cmameB093
MELO3C013413	Cucurbita maxima (Rimu)	cmameB149
MELO3C013413	Cucurbita maxima (Rimu)	cmameB462
MELO3C013413	Cucurbita maxima (Rimu)	cmameB563
MELO3C013413	Cucurbita moschata (Rifu)	cmomeB086
MELO3C013413	Cucurbita moschata (Rifu)	cmomeB139
MELO3C013413	Cucurbita moschata (Rifu)	cmomeB453
MELO3C013413	Cucurbita moschata (Rifu)	cmomeB503
MELO3C013413	Cucurbita moschata (Rifu)	cmomeB552
MELO3C013413	Wild cucumber (PI 183967)	cpimeB102
MELO3C013413	Wild cucumber (PI 183967)	cpimeB106
MELO3C013413	Wild cucumber (PI 183967)	cpimeB539
MELO3C013413	Cucumber (Chinese Long) v2	cumeB102
MELO3C013413	Cucumber (Chinese Long) v2	cumeB107
MELO3C013413	Cucumber (Chinese Long) v2	cumeB531
MELO3C013413	Watermelon (Charleston Gray)	mewcgB190
MELO3C013413	Watermelon (Charleston Gray)	mewcgB196
MELO3C013413	Watermelon (Charleston Gray)	mewcgB224
MELO3C013413	Watermelon (97103) v1	mewmB219
MELO3C013413	Watermelon (97103) v1	mewmB239
MELO3C013413	Watermelon (97103) v1	mewmB252