Cla005129 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGTGGGAGATGGAAGCTGGTACCGAGCCTTTGGATCCTATCATTGAAGATGGGGAATATGGATCCAAACCATCCATCGTCAGTTACTATAATGATGATCTGGTTATGTCGACGTCGACGGTCAACAAAGCAATCAAGGGTAATCTAGTCGAGCTGTTTGCAGGAGAAGAGGAGACTCAAGCTACTAAAGGTTTGCTTCATCCTCCTTCAACGGCGAGTGAATTGGATTGTCCAATTGGGTCAAAGATTCCTAGCATAGTAGCTCAAGAGAAAGAGCTAGAGTTAGTAGGAGGAGTTTCAGAACTGGTTTTGGGGAACAAGTCTGAGTTTGGGGATAAAAAGGTGCCAATTTTCGACAGGGGTATCCTCTCAGGTCCTGGCAACGGGTCTTCTTCATACTCGTAACTGGTGGTAAGCACGGTCGGTACTTCTAGCCAGGTAAGTCCTCTTTCTTTGGTTTCTTATCCTTCATGTTGTGGGTGACAGGATAGGGGCAGTAGGCATGCTCCTTTCCAATGGAGGTGTTGTTAGTGATCCTTTTTCTAATCCCAATGCTCTTGGTATTCAGGTTGTACTGTCCATCGGGGGCAAGGATGCTATGGGATGGGCTACTCTAGCCTCAGTGCGAATCCAACTGGTGGAGGCTAAGGGAGGCGAAGTCGGTGGGTTCTTCGAAAAATGTGGTTGCAGATAAGAGAAAACAGAGGGAGCGAAGTAATAAATTGGCTAGGGAGTTGAAAAAGCTTGATAATTCAGTCAATTATGGGAGCAAGAAAGCCTTGAGAAGGCGGGGTCATCTACATCTCAATGTTGAAAATCGTTTCCTAGAATGTTAGGGGGTTGGATGGGCAAGTTAAAAGAAGGTTAGTAAAGGAGGTGCTTGTGCAAGAAAGTCTGGATATTGTCATTCTTATGGAAACTAAACGAAGCTCGTTTTGTGGGAGGAGAATTGCTAGCATTTGGAGAAGTATAAGGGTGGAGTGGGAGGTCCTTGATTCGATTTGGTCCTCAGGGGGTGTCTTAGTTATCTGGAATACTAGGTCTTGTCTTGCTAGGGAGGTTGTCAGAGGCCGTTTCTCCCTTTCAATCTCGTTCCCACGGACCAAAGGAGGGTCGCTGCCGTGAAGGGAAGCTTTTTGGGAGGAGTCGGAGGATCTTTTTGGTTATTGTGGTTCTAGATGGTGTGTGATTGGGACTTTAACATTCTTCGCTCTCTTGAGGAGAAGGCATCTGGTGGAAGGATTGCTAGCTCCATGAGAGCGTTTAATATGTTTATTGATGATAGCAGGTTGTTTGACCCTGAGTATACTTGAGCTAACTACAGAGCTGCAACTAGGATTGATAGGTTTGGTAGTCCTAGGCAGACGAGGGGGCCAAGAGTGACGTCGGATCATTGGCCCATCATCTTAGTATCGGGATCCTAAAGCTGGGGTTCGAGTCCTTTCCGTTTTGAGAATATGTGGCTTGAGCACCCGTTTTCAAGCTAACATTTCTTCTTGGTGGAACACTTGGGTTCAAGGGGAGTGGGAAGGTTATCATTTTATGGGGAAGCTGAGGGCCCTTAAAGGAAATGTTAGAGTTCGGAGTAGAGAAGTCTTTGGAGACGTCAAGACTAGAAAGAAAGAGATCCTTGCTAGAATGGAGGAAATCGATGCTTTGGAGCTGGAAGCCAAGAGGGATGGTTTAAAAGGGATTTTTGTAGACTTGATCAGGAAAGAGAGTATTAGTTGGCTGCACGTGTGGCTCACATACGACTCTTGCCAGACTCTGGGGTTCTTTAAATTGAAAGATGGGCTTCCTCTTGAGTCCGGTGGTGACATAAAAAGACAAGAAAAATCTTACCAAACTTGAGAGGGTAGCAGAAACCAGTGGAGGTGGGTTTAGGTGCAGATGGACATGAAACTCATAAAACTTGAGGTGAGAAACAAGAGGGATCCAAACCCCAAAGTTCACAAACCCTAACTGCCCCAAGCAAAAGAACCAGAACTCTGATATCATGCACTCAGTGTCGGAAAAAAACTCAATTGTATTTTAGATTCGAGTCACATATGTATAGGTGTACATAAATTAAGAATTGAATCATTACAATAAAGGACAGCTAGACATGATAGTGGATATTATAACAACACCATGTATGCTTATATATGTTGAATTCTAATGTATAGAATCAGTGAGGAGTTCTCTCGTATTGCCGTGTAACATTATTAGGTTCAGTTATTTTTTTCAGAGAGATTTTTATTATTCTATATGAAAAAGACATGGTACTATTTAAATATAATGCCGGAGAAATTTAAACTAAGGGAATTAATTATAAAATGAAAGGATATAAAATAAAATTTAAGAAATAAAATGACTAATATTTAAATTCAATGGTATACACAAATCTATAGGTTCTATTTTTTTTGCCACCGTTACTTTTATACATCAGTCAAAAGTTTCCTTTGCATCTTTTATATACAATTTCCTGTGCTAAGGACACCAAATGGTGAGCCTCAATGTGAAGAAACCCTTCTAATTTTATCACGTTTCTCGTGAGATTTTTTTTCTTTTTTTCCCTGTAAGATCTGAGATTACTGAGTTTGTGAAGAATCATGCCGTGTGATTTCACATCCTTTTCTTTTTGGGGTTGTGCTAGGCCTACCATCGACAGACAGTGGAACTCTTGAGAAATAGTGATGGGCCTTCAACAGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGGCTTTCTGGAACATTTGTAGGTGCAGCTAGGAACAAGCATAGATTAGATATTTTAAAGATCGTTAAGGATGGAGTTGAGCATGCCTTCTCTGATGCACCGAAGAATTTATCTTTCCTGGAATGTGCCGTTCTACATTTTGTTTCCAAATTGCCTACACCTGATATCCTGGAAATGTAAGATGCTTATACCATTTTAACATCAGGTTGAGTTAAAACTAGTATTTGCTTGCAATTTAATTCGTAATCACTTTTCAAACAGTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGCTGGCGCCCGTATCATATGTTTGTTGACAGCTTGCGTGAAAAGTATGCTAAAAATGATGGTTTGCAAGGTAACTTGCTCCTCTCAATTTAAGTTGTCTTTAGAGGAAAATTCAATCTCTCTTGGTTGAATGTGCATGATTCTTGATTGGATTCAGATGCATCTTGAGGATATTGTGGATTTTTTCACTTCCTTTGCATTATTGGATTTACGTTATTTAGTTCTGCATTTTTTATTTTTCTTTGGCTAGAGAGAACCAAGGCCACGTTTAATAACCATGTTGGTTTTTGTTTTACAAATTAAAAATCATTTATGTCTACAACTGTTTTTTGTTTCCTATTTTTAAATACAGAAAATTAAATGAAACCAAACATTTTATCCCAAAAAAAAAAAAAGTACATAACAAAACATAAAACATGTTTGGTTTTTATCAAGAAATGTGTTAGAGCGAGAAATATGTAGTTGGCCCATCACCTACGAAGCGTAGGATCAGAACTTAGCTCATATACCATGTTAAATCACCAATCAATCATAAATAGGGGTATTCAAATAACCCGATGATTCGAAAAAACCTGATCAGCCTGTTTGGGTTAGGTTATCAACTCATTTGGGTTAGGCTGGGTTCAAATAAATGAAAATGTTACGAGTTGAGTTGGTTCATGGGTTCACCTAAAATAACCCAAACCAAACCAAACCACCCCAAACCTATTATTAACTCTAAAATGTATATTTTTTTACTTAATTATAATAAAATTATAGATACATATATTTCTTTTAGTTTTTTTTTTTTTCCTTTTTTGGATAATTTTTTCTCCAACAAATCCTAGAAACAATTTTTAAATACTTTGGAAAGAAAAATTTCATAATATAAATTGAAACTGAGTTATTAATTCTAATTCAATATATGAAAATAACTAAATAAATTTTTTGCATATTAACATTTTACTTTTTTTTAGAACAAAAATTTAAATAAATGACCCGGATAACTTGAACCAACCCAACCCAAATGTTTTACAACCATGAAACATTTGGGTTGGGTTCATTTTTTAATGAGGGTTATTTGGATTGGGTTTAAAAGTCTGCAACCCAACCCAGCCTAACCCACGAACCACCCCTAACCATAAGCTTAAGTTGATAGGTTATGATAAATTTAGTTATATTGATACTCAACAGTATGGAAATAAAAATCTGGAGATAGAGGTAAACTTTTTAGAGAGATAAAAGTAAATTCTAGACTGAATAGAAATTAGAGAAATGTTAGAGGGAATACTAGTTAGAGTCCTTAAAAGAAGAATATTAGTTAGAAAAAAAGAGTCAGAGAGAAAGATAAATGGGAGAGAGAGAGAGAGAAGACTTCAGGGGAGAATGCTAGAGAGAAGCATGTTAGAAGAGAGAAATTTTATATATTAGAGAGTTAAGAGAAATATAAGTTAAGAGAAGAATTAAAATTCTTGAGAAGAGAGAGAGATGTTAGAAGAGAGATAAATTAAAACTTTAGGGAAGTTACTGTATTCGGTCAGTTTAAGTTGCTATTTTTGTGGAGTTAGTGCAGTAAATTGATTTTTGTGGAGTTAGTGCAGTAAATTTTTGTGGAGTTAGTGCAGTAAATTGATTTTTGTGGAGTTAGCTAAGCTATCTTTAGAATTAGATCTATATTTATTTTAGGTAGTGATTGAATGAAAATGTACTTTCCCATTTCTCATTAAGAACTTCGTGGTATTAAAGCACTAAATTCTTAAGTTGTTTGGTAGAATGGAACGGGAGATGAAAATGGGTCTAATGTTTAAATGAAGCTGATTTCTATATGAAGTATGGTAAACAGAATGAATCATATTATATTTTCTTTTTGTTGTGATTTCAAAATCGTTTTGGTGATGGCAATAGTAGAAATTTTATTTTGGTTCTACCAGTTCTAATTCTGGTTCATTCCCGTTTCTATTAAATAAATGAAGCCTGAGAGTCTATGCTGCATATGTTCCAATGGCTTCTTCACAGACTAAGCTGTCGCTATATCTGTAAATGTAATCTTTTTTTTAATTTCAACTTATAATTTATTTAATGTTCAAGTGCACTCACCGATCCATATATTTATATTTATTATTGCTATAGTATCCTTCTTTGTAATTTGAACATAGTCTCAATTCATTATATCATGAAAAATACATTTCCTTTTAAAAAAAAATTATTTAATTTTCTTTGTTGTGTAATTGTAGATGAGAAAGAAGAAAATTCTACTAGACGTAGGGGTCGGCCCCCCAAAAAACATACCATACAGGGAGAGAGACTTTTTGATGAGCAAAGTGCAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATGTACATGATGAAGAGAAGCAAGATGAGGAAGATGAGGAAGAAGTACCACTCATCCATTCAATTAGGCCATCCTCTAAATTGAGATCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACAGGAAAAGCTGCAGGTAATATGTCTGCTTCCCGAATGAAAGTTTTTAGTATTAATGAAGTAGATCTTTTAAATAACTCAGATAGCTTTTAGTAAGCTGCTTAAACATACCCAGCTTGAGGCATTTGCTCGGGCAAGCCTCATGGTTGATTTATTATATTGTTCAGAAACTACCCGCTTCTTCATACAAACTTTGTCTTCACTGCACCTGATACAAATATTGGAAGTAACAATCATTTACATATATTATTATGGGCAAGGATTTTGTGCAACGTAGGTTGCATCTAATTCTATGCATCCCTTTCTTTTACCAAAAAAAAACTCAAAAACAAGTCATATATATATGTTTGCTACATTGCAATTTTCTATTGGTCAACTATCTGCACTGCACAAAGATCAACCCCCAAGTTTATTTCTTTTGTTATAGCATGAATCCATGCAACAATATTCTTACTTGCTGTGTACAGTCTTGTATGGCAGAAAGGATCAAAAAAGTTGTTTCAGATGAAAAGGATATTTGTTTTTCCTTACATAAGATTTGTGGTCAGATGAAGCTATCTTGGTTCATGTGGTGCTTGGTTGAAGTTGTACTTCTGCCATTTTTGCTCCATGTTATGAATGAATAGTGTTATTTTGAAAATGAATAATTCATTTCTGGTCGATCCTTTTCCTGCAAAAGATACTATCAACACTACTACTGATAGTTAATCACACCTACTAGCTGCATATATCTGTAGCAGGTCAATTTCTCTTGTCTTATTGATCCTGTGTTAATCTGCTCGTGATTAATCATTTTCTTTCTGCAGGGCCACCGCCTACATGA ATGCGGTGGGAGATGGAAGCTGGTACCGAGCCTTTGGATCCTATCATTGAAGATGGGGAATATGGATCCAAACCATCCATCGTCAGTTACTATAATGATGATCTGGTTATGTCGACGTCGACGGTCAACAAAGCAATCAAGGGTAATCTAGTCGAGCTGTTTGCAGGAGAAGAGGAGACTCAAGCTACTAAAGGTTTGCTTCATCCTCCTTCAACGGCGAGTGAATTGGATTGTCCAATTGGGTCAAAGATTCCTAGCATAGTAGCTCAAGAGAAAGAGCTAGAGTTAGTAGGAGGAGTTTCAGAACTGGTTTTGGGGAACAAGTCTGAGTTTGGGGATAAAAAGGTGCCAATTTTCGACAGGGGTATCCTCTCAGGTCCTGGCAACGGGTCTTCTTCATACTCTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGCTGGCGCCCGTATCATATGTTTGTTGACAGCTTGCGTGAAAAGTATGCTAAAAATGATGGTTTGCAAGATGAGAAAGAAGAAAATTCTACTAGACGTAGGGGTCGGCCCCCCAAAAAACATACCATACAGGGAGAGAGACTTTTTGATGAGCAAAGTGCAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATGTACATGATGAAGAGAAGCAAGATGAGGAAGATGAGGAAGAAGTACCACTCATCCATTCAATTAGGCCATCCTCTAAATTGAGATCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACAGGAAAAGCTGCAGGGCCACCGCCTACATGA ATGCGGTGGGAGATGGAAGCTGGTACCGAGCCTTTGGATCCTATCATTGAAGATGGGGAATATGGATCCAAACCATCCATCGTCAGTTACTATAATGATGATCTGGTTATGTCGACGTCGACGGTCAACAAAGCAATCAAGGGTAATCTAGTCGAGCTGTTTGCAGGAGAAGAGGAGACTCAAGCTACTAAAGGTTTGCTTCATCCTCCTTCAACGGCGAGTGAATTGGATTGTCCAATTGGGTCAAAGATTCCTAGCATAGTAGCTCAAGAGAAAGAGCTAGAGTTAGTAGGAGGAGTTTCAGAACTGGTTTTGGGGAACAAGTCTGAGTTTGGGGATAAAAAGGTGCCAATTTTCGACAGGGGTATCCTCTCAGGTCCTGGCAACGGGTCTTCTTCATACTCTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGCTGGCGCCCGTATCATATGTTTGTTGACAGCTTGCGTGAAAAGTATGCTAAAAATGATGGTTTGCAAGATGAGAAAGAAGAAAATTCTACTAGACGTAGGGGTCGGCCCCCCAAAAAACATACCATACAGGGAGAGAGACTTTTTGATGAGCAAAGTGCAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATGTACATGATGAAGAGAAGCAAGATGAGGAAGATGAGGAAGAAGTACCACTCATCCATTCAATTAGGCCATCCTCTAAATTGAGATCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACAGGAAAAGCTGCAGGGCCACCGCCTACATGA MRWEMEAGTEPLDPIIEDGEYGSKPSIVSYYNDDLVMSTSTVNKAIKGNLVELFAGEEETQATKGLLHPPSTASELDCPIGSKIPSIVAQEKELELVGGVSELVLGNKSEFGDKKVPIFDRGILSGPGNGSSSYSIKDVQNRTENINTDEDPSGWRPYHMFVDSLREKYAKNDGLQDEKEENSTRRRGRPPKKHTIQGERLFDEQSASEDEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGKAAGPPPT
BLAST of Cla005129 vs. Swiss-Prot
Match: SCC3_ARATH (Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 9.8e-24 Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 1
BLAST of Cla005129 vs. TrEMBL
Match: A0A0A0M1E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560785 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 9.7e-63 Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Cla005129 vs. TrEMBL
Match: U5FTL5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14940g PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.8e-46 Identity = 95/133 (71.43%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of Cla005129 vs. TrEMBL
Match: A0A067JCH3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22012 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45 Identity = 93/133 (69.92%), Postives = 112/133 (84.21%), Query Frame = 1
BLAST of Cla005129 vs. TrEMBL
Match: B9GU75_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23150g PE=4 SV=2) HSP 1 Score: 188.7 bits (478), Expect = 9.1e-45 Identity = 92/126 (73.02%), Postives = 107/126 (84.92%), Query Frame = 1
BLAST of Cla005129 vs. TrEMBL
Match: B9GUB7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23150g PE=4 SV=2) HSP 1 Score: 188.7 bits (478), Expect = 9.1e-45 Identity = 92/126 (73.02%), Postives = 107/126 (84.92%), Query Frame = 1
BLAST of Cla005129 vs. NCBI nr
Match: gi|778662200|ref|XP_011659512.1| (PREDICTED: sister-chromatid cohesion protein 3 [Cucumis sativus]) HSP 1 Score: 248.4 bits (633), Expect = 1.4e-62 Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Cla005129 vs. NCBI nr
Match: gi|700210900|gb|KGN65996.1| (hypothetical protein Csa_1G560785 [Cucumis sativus]) HSP 1 Score: 248.4 bits (633), Expect = 1.4e-62 Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Cla005129 vs. NCBI nr
Match: gi|659099245|ref|XP_008450503.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 5.3e-62 Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Cla005129 vs. NCBI nr
Match: gi|566204355|ref|XP_006375519.1| (hypothetical protein POPTR_0014s14940g [Populus trichocarpa]) HSP 1 Score: 193.7 bits (491), Expect = 4.1e-46 Identity = 95/133 (71.43%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of Cla005129 vs. NCBI nr
Match: gi|802794865|ref|XP_012092345.1| (PREDICTED: sister-chromatid cohesion protein 3 [Jatropha curcas]) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 93/133 (69.92%), Postives = 112/133 (84.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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