Lsi06G000050 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G000050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Sister-chromatide cohesion protein
Location	chr06 : 36723 .. 52173 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAGTTATATATGTAAGTCATTAACAGTAAAAGAAGAGTCTAAAAGCATCAATAAGCTAGGTTGCTTTTTATCATTCTTATACTTGCTGTTGTATGATGATTTTACCTTCCCGTGTTTAATGCATCTTTTATATTTGTTCATATAGATGAGAGTGAAGATGAGGATGTAAGTAAAGAATATGTGGAGGAGACAAATAAAGAAGCAATCATGATTGCTGTCGCAAAGTTGGTTGCAAGTGATACAGTTTCTAAGGTAAACTTGTTTTGAATTGGAAATCATCTTGGCGTATTCAAAATTTATCGTTTGAAGCCCTTTGGTTCAGTGCAGGGAAAGCTCTTTGTTGTAATGTGGCAGTATTTTATTAACCTCTCATAAAGTATGTACAAAAGGGGGAGCCTTAGCCTTTATATAAAGGATGCACTTTAACTGCTGTTGTGTTTGATAAATTATTTTCTTATTTTTCAAAGAACCCAACAATGAGTAAATATAATAATACAAGAGAAGTTTGAACTAAGGAAACTAATTACGAAGGGAAAAGATAATGAAAAATATATTTTAAAAAGTTGAAGGAAAATAAAACTTTTCATTGATGAAATGAAAAGAGACTAATGCTCAAGTTACATAATTTTCATAGGAAGATAAGAAAATGAAAAATGAAAACTGCAAAGCAACAAATATTTCTTGGTGGTAAGCTCATAAACACTTCTTCTTCAAGGTCACCATAAAAAAAACATTTTTAAAAGTGAGCTGGTGAATGGGTCAATCTAAATTTGATGCAAAAGATAAAGGAACTCTGATGGAATTAATTTTAGCAACAAGGGCAAAAGTTTCCTGATAATCAATCCCATAGGTCGGAGGGAATCCTTTTTTACTAGTCTTGCTTTATATCTTTTTTTTTTCTTTTTTTTTAGAAACGAAAACAAGACTATTTCATTGATATAATGAAATGAGCCAAAAGCTCGAAGTATAAATAAGCAAACATAGAAAAAAAGTACAATGGGTAGATTGCAGAACAATATAAGAAACTAAACATGAGAGGCAAAAGAAGCTAAACTAAGATACAAAACACCCAAGGAAAAAAAAAACCAGTCGAGCAAATTTTTGTTGGAGAATGAAGATTGAAACTTGAATGACAGATAACTTTGAAAGCATATGATGCTTGAAGCTAAACCCGTATTTAGAATGACAAACAAGCTGCCAACATATGCACCTCTCCAAAGACTAAGCCAGCCAAATTCTTGATACAACCTTACAACTCCAACCAAAGCAAAGGACGATCACGGGGGAGGAGAGCACCAAACAACTTACGGAATGCCTTATGACTATCGAACTCAACTCTACTGAGGCTCTGGATACAAAATTGCGATCGAAATCTTTAGGAAGAGATAAAAATCTTACCCAAAAATCAAACCACATTCTTCAATCGTGGAAAATTTAGATGGAATTTGGGAAGGGGATAGTTGAAAACGGTGAGAGCAAGTCTTCTGATTTGAGCTTTTCTTGGCTGAAATTTGGAAAAGAGCTGCAACATCTTCAATTGTATCATCATTGGGGTGGACTTCTTTAGGTCCAGCTTTACCAATTCCTAGGTTGATCTCTTCTTGAAATAAATCACAAATTTCTTTGCCAAAATTGTCCACAAACTCTGCTTCTTCCTTTTTCTTCCTCTGCCTTAGAGCAACCAATGTGTTCACTACTAATGCTCACTACCAATTCGCAATCGAAGTCATGTTATCTATAGCAAGGAGTTTGAATTGTCACATGGAACACCTCTAACAAATTGCACATTGGAACCTGGAATTTTAAAGATCGACTGATGAAACTTCTGAGGAGATTTAACAGACCGTTTGGAGGAAAATTTTGGAATTTGGGCTTAAACGCAACAAACCTCTAGCAAATCAGGATTTGTGAGTGCAGACCAAGAATTAATGAAGGAGGTCTTCTTCCTTGCAAAATGTCTATGGAAAGGTTTTAGCAGATAGGAGTGTTTTTTTTTCTTTGCCACGAGCAAAACAGGGGGTGCAATATACTTTTTGAACGCTTGAAGTGCAAAAGCTTTGGTGGGAGAATTGTTTTCTGAAGTAATAAAAACACCTTCATCATTCATTGGAGAGAGAAGACGCCTGCTAAATGAATCAGTCTTTTGGACTTCCCCAAAGTGAGTTCCAATATTAAAATGGTTCCTTTGAATTCGGCGGGAAATTGGAACCGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACCTTTTGAACTACCTTCGTGGGAATACCAAAGGACATTTGATCAGTATTTTTCGCTTTAAAATCATTAAAGTTCTGGTTTTGAACAACATTGAAAAGATCACCCATTGGCGGAGATGGCTTCTTCTCTTTCTTCATTAATACAGAATCCGGATTTGGTACATTTGTGTTCCCATTGCCTTTGCCTATGACTTATGGATCGTCTTCTTCCTCAAAAGAAGTCTTCTTCTCTATTTCTATTGATATTTGTGGCTTTGTCGAGCTCTTCTTTGATAAGTAATCAAAAGGATTTCGAGAGAAAAATGGAATGGATTGAATTGAATCAAGAAAATACACTTCAAGATTATCAACTCTGAAATTCAAACTTTAATCCTGTAAAACCTGTCTCAATCGAACTAGATCAAGAGGATTAGTGAAGTTCTTAATCAATAAGTCACCATTTGTAATTGTCAGGGCTTCCAGAGCTTCTATATCTCCAAAATTTAAGTAAATATTACCGCGTTTAACGTCAATAATCTCTATGGTGGAAGGCATAAAACCACACAAATTCTTCTTCACTTGAATCTTAGCTACAGAGCAATTGAGAAGGTTCAAAGTTTCTATTGCAATGTCCTCAAGGCCACCAAAATATGCTCCAATAGCCTCGATGGTTTGTCTACTCCAGTAATCCGAAGGAAGATTTCTGATCGCTTACCAACCTCCATACCTTTCCACAACTAAAGGCCGACCATGTCTAAAACGATTCCATTTTTCAAAAAGTAAATGAAAATTACCTATCACCTGCCATTTGCCAGGGAATACAACTAATTCCTCCATCTTTGGATGATCAATCTGAATTAAGGCATTCTCCGCAAAAAGTGGATTAATGATGACCTTCGATTGGAAGATATCTTCCAAGGACTTTGCGATTTCTTTTCGGTCATTAAACAAAAAAAGCCTCGAAATAACCCAAAGATTGTTGAAATCTTGCTTGAAAACCTTTGAATTTGTTATAGTTCAATATTCACCCATGCTCTGTTTCTCCTTATTTAAAATAGAGGCTGATGACTTTCGAATTTCTAGCAATGAAGAAAAACTCTAAGAAACAGTAGATTTGTGCTTTCGGAAGTAGATGGAAACTCTAAGGTGAAATATTTATGACTATTTGACAAAGAAAGTTTCCGAATCAACATTTTTAAATTCTTCAAATAAGGCTTCTTGTATATTCTTGGGACAAATAAGTTGTCTTTCCTAGAGGTGAAATATTTATGACTATTTGACAATTTTGTGTACGATATATAAGATGTAATCAAAGCTCTAGACACTTTTCCTGCAGTACTTATATTCTTTTTCCTCTTGGGCTCACAACGGTGCTTCTTCTAGGCTTTTTTTGCTTTTGCTCTCTTTTTTAATTGAAAATTTTCTTTTAATCAGGACTTTTTTGTTGTTGACATTGGTATGATTATTACTGGAGTGGGAGTACTGGAGCCGTGTAACATATATCCCAAAGTAGTTTATGTTGGGATGAAACTCCCAACTAGGACGTTAACAAATTATGAAATATGAATACTTTGAGCTAATAATCGTGAAATATGAATAGTATGAAACTGTTTATATTTCTTGGGTCAGAACTCATTGCATCTGGTTGTTAGTGCAGGAGTATCTTGGTCCAGAAATTATTTCTCATTTTCTTATACATGGGACAAGTGTAGCAGATATTGTTAAGCATTTCATTGCCATTTTGAGAAAGAAGGATGGCAATATCCCAGTTATCTTTCTTGAAGCCATGAAAAGAGTAAGGACCATACACTTGTATAGGGTTTACTTCTCTATATCAGGGACCTCTCTCTCTCTCTCTCTCTCTCGCTATGAAAGTATATATGCATACATATAAGCATGCTTGCATTTATGCGTGTGTTATGAATATCTGATTAGAAGCATGCATTTGTGATTTGAATATGCTGATTAGAAGGTATTTTGTGGTAAACAACTTGAAATGAATCTTGTCAATCAATTGCTTGAATTCTTTTACCAAACTGGACCATGTGGAGCTTATTTTATTTGCTTCAAAAATTGAAGAATTTGAAAATGTTGATTCGGAAGTAGTCTCGAGTGAGGAAGAAAAATCCAACGAAGAAGAGGGAACTAGATATCGAACATCAAAACTCTAAATCAACGAACGAGATGGCCGGAGAAGAGGTAGCCAATATTAGTGATTCTTCACCAAAATTAAATATGGTAGTCATTTGGATGAGGTGAGTTTTGTCTCCACATCCTAACAATCTCCCACTTAGAGACAAAACAACGATCTTGCCTCCCACTACAACGAAACTTATGATCTTGGCAGACGTCAAGATTTGGCTCCCACTACAACTGTTATTTATGATCTTCTTGACTAGCCAAGGCTCAACATGAAACCTATAAAATTAACAAAGTAACAAAACAGAAAACCAGAAAATAACTGTAGCTCATCTGTGCTTACCTCAAGGTATAACCAAGCTTCGTGGAACTGTCCCCCTAGACATAAAGGACTATCACGTGCTCCCACTTCAACTAAGTGGTACCAACTTTTTTGAAAAGGACACAAAAAATTTCATTGATATAATAAAAACATATAATATTACAAGTAGAAGGAAACCAAAAGAACTTGAAGATCAGACAGTACACCTTGACATCTCAACTAGGTTGACACCCCCTTAGCACCACATCATTTCCAGGAACAATACAAGCCAGAAATTGAATATGCAACTTCCAGAATAACACAATCCTGCTAGAAGTTTGTACAAGAATCATCAAAACTTAAAAAAAAAAAAATAGCAACACCGTTACAAAGAATAGGAAAATTATACAAGGAAAATGAATGCCCTCCAATTGAGGCTGAGATCTTGAATTGAGAAGTCTTCAAATACTTTTGTAAGACAACTCTGGTCCTGAACACCTGTTATTGAAGAAGATACATACTGAAAATGGCTTGACTCCTTCCTTCAAGCCTGCTGCTAAGCTAGAGACTTTATCTTTGACCTTAGCAACTGCTTTGGCCTTCCAATCTGATGCCTTTACTCGTCTAAGCAACTTCATCAATCCATCCGAATGTCTGACAACTAGGGATTCGCGATAGCCATCAACTTTCTCTCTCGGACTTCTCAATTGTTTTTGAACTGATGGATCTTGATTTGACTTATCAAAATTGGCTATCATTGTTGCTAGCTCAACTATACCTATGCACCTGCCATCCGTAGCTTTAACTGGCATCCACCGTTTCTCTGATCTTTTGGCAACATCAAATTGACATCTCTACAGTGTGGAATCTTTGTGGCCAATTGCCACTATCTGGGATCCTAACATGAGTTTACATGGTTTCTCATACTTGTTTGTAAGTGCTTCTATTAATTTCACTGCACTAGTCTTGTCAGGTACAAGGCTAGCTACATTCATCGACAGACACATTCTGATGACTACGACTACTTCTTCATTCAGGTTCTCCCAATCTTCATTTGACATCCCTTCCGGTTTCTCTTTCAATGCCTTTTGCATTTTTTTGCAGGTTAAGGATTCTTAACCTGCATCTTCCAATACCCAAAATTTTTCCCATCAAATTTTATAATCCCCTTGAAACTTTTTAGCTCTGATGATCCATGACTCCTGAACCAAATAGCTCTAATACCACTTGTTGGAAATTTATGCAAGATATAAATAAATGCGGAATAAACTAAATTATATCTCAAACTCCCACTTCACAAGCAAGAGCCAAATAAGTAAACGATCATAAAATAATAAATAATAAAGAGAAGGGAAAAGAAGAACATCGAAAAATATATTGGTTCGCCCCAAACTCGAGACTACATCCAATCTTTTGCAACTGCAGGTTCTACTTTGATGGAGATGACAAAGAAACCCAAACTTGCGCTACAAATCTCTCCCAAATAGCCCAACACAAACTATTTGAATCCAAGTATCACAACTCAGTAACTTGAAATAAACAATAAAAGAAACTTTCTACCCAACAAAAAATACACACGGTACTTATCAATAAATGCGGAAGAAAAATCTCCAGGGAGCTTCGGCCAATTTTCTTCTTCAGCGGCAGAAATGGGCTCTCGGACCTTCTACACTTTTTTCTTTCAATCTTGATTTCTTTTATAAATGAATCCACCACCTCTATTTTCTTCCTTCAAAGAAAAAACCACCTCCCATTTTTACCAATCAAAAACTGTGTTTTACTCACCTCCATAATTGCCCAATGTCCATAATTGCCCAATTAAAAGCTTTCTTTTGGGTTAAGTAAAAAAGCAAATGGGCTTGGTAATTCAAACGGCCCAATATTATTGATTCTTCACCAAGTTTTGTCTCCACATCCTAACATATGACCCATCTGGTAGATGATGTAAGAAGACAATTTATCATAGTTCCTGGCTTAGCAATGGTTGCAATAGGATTAAAAGATGGTGCTTGCAATGATTCCTAGTACAACTAGAATTTAGCAAAATCGTCCGCATAAATGGTAACTAACTTCTTAGTCGTATCCTTGGTGGAAGCATTCGAAGCAAGTTGAGGTGATTGACACTTATTCAACAACTTCGTCAATTATGTTTCATATGACTAGGATTACAATAGTAGTGACATACAATTTCCTGTGAATCTTCTCTTCAATTATCATAACCAGTTCTCTAAGTATTGGTGCACATCCCTTTAGTAACCTTATGATTCTTATTTTTATTAGTAAGAGCACTGCTGGATTGAGGAATGGACAAACTTTTTTTTTTGGAAAATGAAACACTTTTTATTAATAAAATAAAAAAAGGAATAATGCTCAAAGTACAAGGATACCAAGAACAAACATATCGAAAATTGCAAAAATGAATACAAAGAGAAGAAAATTACTAAGCAGGAGAAATAAAATCAACCTAAATCTAATGTGAAAAGGCTTGAACCCGTGCTAAACCAAAGTTAGCCAACTATTAAAGAGGTTTATCCTATATGGCCTGATGAATTCTTTCAAACTAAACTTATTAGTTCAACTTTTGTTCTCTTTCTATCTATGTATTTTCTGTTTTTGGAGTTTTTTGACTGATGTTTTGATGATTGAATTGTCCCTTATTTACCTTTTCTTTCTCCTTTATGGTGTTTTGTATCTATTGAGCATTAGTCTCTCTTTTCATTTTATCAATGAAAAGATTTGTCTCGTGTTCAAAAATACCTTTCAAACTAAAGCTTTAACAGAAAACTTGAATGCCAACTAAGCTTGAGAAAAGCCACACATAGAGAAAGGCTGCAAGAATGTACAAACAACCAAGCAAAGAGGGCATGCCACTAAAGGAAGAAGAACCCAACATATGTATCAACAACCTTTGATCATCTTTAAAAAGAGATAATCCTGCAGAGTGTAGCTTAAACCCGAAGGACTACCACCGCAATAAAGTGCAAAGGAGCATTCTTAAAACTGGGGACAAATTCAACCCACTTCACACAATTGAATACCACAAGCTTTTACAATGGAAGAATATTTGGATGGTATCTGAGAGGGAGGCAAAGGAGAAGCACTCGACCTTGTATTTGAACACACTGTTTTCCTCAGCCCTATGATATAATAAATCAAAAGCTTCCCGTAAATGTTCTACTAAAAACGGTTCCTCATGAACTTGGTCCAAATGATGGAAATCAGATTCTTCACTACTCACGCTAACAATTGAGTTCTCATCAGAATCATAAGGGCAAGAGAAATCCTTGGAAGAATGACAAGCAAGACCTTTAGTAAACTGAGTCTTTGAACCAGGGATGGAAAGAGTCAAATGACTAGAGAGTGAAAACCTTTGAAGAACAATGACTCTTTGTTTATCTAACGTAGGAACTTGAGCTTGAATACACTTCTCCTCTAACGAGTCAAAATTAACTCCTAAAAACTTGGAAGAAGAATGATTAACAACTCTCCGGGTAAAATGCAAAAGAAAATGTGAAACAAGCTTCCTAGAAACAGAAAAATCTTCTTCTAACAATCTGCCTGTCTTTAAAATTCCAGTTAGTTCCTTACTAAAAGCTTCCTCACCTCTACCACAAGTTTTTTGTAAAGACAAATCTAGTGCCACATTTTCATCATTCCCATGCTTTTCCCCTTGTGACAATCCAGATTGCTTTGCTAAGATTCTGAGCTTCTGAGGTTTGTCCAAATTTTTTAACGACTCAAAGGGATCCCTTGGAATGGACAAGCTAGATTGAGAATTCTCTATATAGAGAACTCTACTAAATACATCTTCCAAAGAAGGGATTTCAGCGTTGATCGACTGAAAACATTTAACCAGAAATGAAAATCTTTAAAATAGAAAGTCCTTTGTATAGTGCAACTGCACGCTATCAAACATTGATAAGCATCAAAAGTTGGTTTAAGCAATTCTTTAATTTAATGAAAAAGTCTTGTTTCCATTTCAAAAAAAATCCTTTTGTTAGAATATATGTCGTTTGGTCTTTGGAAGGAACAAATGAAATGCAAATTGCTCCTTCTCTAGATGTTCTTTAATGAAGTGTCGATCCACCTCTTTATGCTTTGTCCGATCATGTTGGACTGGATTTTGTATAATGTTTAAAGTAGCTTTGTTATCACAAAAGAGCTTCATTGGAGCTTTGACCTCCATCCTTAATGTTAAATCACCAATTGACCTAAAAGCTTAAGCTAATGGGTGAAGGCAAATTTAATATCATATCATCTAACACTCCTCCTCACTTGTGTGCTTGAAATATGAAGAAGACCCAACAAGTGGAAATCAATATTAATTGGGGAGGAAATAACATTGTAGGAGTTTGAACACAAGACCTCCCTGGACCATTTGCTCTGATACCATGTTAAATATTGATTGACTCAAAAGCTTAAGCTGATATGTGAAGACAAATTTAATATCATATCATCTAACACTTAACTCTTGAAGTATTCTGTAAATCGACAATATCTCACACTCCACTAGTCATGGCCTTATACTCTGCTTCAGCACTACTTCAAGCACTACATTTTGCTTCTTACTGCGCCATGTCACCAAGTTTCCCCATACTTACGTACAATATCTTGAGGTTGACTTTCGATTAGTTATAAACCTTGCCCAATCAGCATCGATATAAGCTTCTACAGATTGGTTGTCTCCCTTTTTAAAAAAGAGACTGTCTACTAGGACAACCTTTAAGATACCCGAGTATTCGATACATTGCCTCAAGATGTTCTTCAAAGGGCTTATGCATGAACTAACTTACTATACTCACTGCAAAGACATGTCAGGTCGAGTGCGTGATAGGTTCTATTATTGTTTTAGAGAGATTTTTATTATTCTATATGAAAAAGACCCGGTAATCTGTAAATATAATACTGGAGAAATTTAAACTAAGGGAATTAATTATAAAATGAAAGGATATAAAATAATAATTAAGAAATAGAATGACTAATATTTAAACGCAATGCTATACACAAATCTATAGGTTCTATTTGTTATTTGCCACTATTACTTTTATATATCAGTGAAAGTTTCTTTTGCATCTTTTATATATCAGTTAAAATCATGCCATGTGATTTCACATTCTTTTCTTTTGGGGTTGTGCTAGGCCTACCATCGACATACAGTAGAACTCTTGAGAAATAGTGATGGGCCTTCAACAGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGACTTTCTGGAACATATGTAGGTGCAGCTAGGAACAAGCATAGACCAGATATTTTAAAGATCGTTAAGGATGGAGTTGAGTATGCCTTCTCTGACGCACCAATGAATTTATCTTTCCTGGAATGTGCCGTTCTACACTTTGTATCCAAACTGCCTACACCTGATATCCTGGAAATGTAAGATGCTTATACCATTTTGACATCAGGTTGAGTTAAAACTAAATATTGTTTGAAATTACCTAATTTAATTTGTAATCACTTTTTGAATAGTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGTTGGCGCCCGTATCATACGTTTGTTGACAGCTTGCGTGAAAAGTACGCTAAAAGTGATGGTTTGCAAGGTACTTGCCTCTCTCAATTTAAGTTGTCTTTAGATGAAAATTCAATCTCTCTTGGTTGAATTTGCAGGATTCTTGATTGGATTCAGATGCATCTTGAGATATTTTGGATTTTTTCACTTCCTTCGCATTATTGGATTTACTTTATTTAGTTATGCATTTTTCTCTTTGGCTAAAGAGAAGAATGGCCATGTTTGATAACCATGTTTGTGCTTTTTTATTGTGTTTTGCTTTTTGTTTTTTGTTTTTTGTTTTTACAAATCAGAAATCATTCATGTGTAACAACTGTTTTTTGGTTCCTCATTTAAAATACAGAAAACCAAACCAGACCAAACATTTTATTTAAAAGAAAAAAAGGAAACAAAAGAAAAGAAAAGAAAAGAAAAAGTACAAAACAAAACATAAAACATGTTTGATTTTTGTCCCCCTTTTTTTTAATGGAACATACCTTTTCATTGAAATTATGAAATGAGACTAATGCTCAAATTACAAAAGAGTATACAGTATACTAGACATAAAGCTATCAAAAGCTTGCCAATATAAGAATATAAAATCAAAACTAGACCAGGATATCAAATAAAAGCTTGACATGGAATGAGACTTCTTCTAGGACTGATTGAATTCTGAAAAAATCAAAGACCAGCTTCTTGAGGCTTAACTATCAACCAATCTATGACCCACTTCCTAACATCAAAATCTACAAGACTGCCAAAATCCTTCCCTAAACACGACAGGCTATTAAATCCACCGAAGCTGCCAACAGATCCATGAAACTTAGGCGAACTTTCCAAACTTTCCCCAAGATTATCTCAAAATGAGCCCAATAAGTAATCAAACAGCCCAAGACTTCTGAAATCTTTAAATGCGGTGAAAGGTGATCAAATCAAATCTATGCCAACAAATATCATAGCTGAAGTTGTTTCTAGAAATTACTGCCGCACTAGGAAGATGTTGATCGCCCCTTGAAAAACCGATCCACTCAAGATGTCCAAATGCAATTCCCATGAAATTCAGATATCCTTCCCCGCCCAAACCCATAGTAATAAGCCTTATCCATTTATGCAATCCTATTCCAAGACCAATTGCAGGAGTTGATGGTCTGTCTAGAGCCATGGAGACACACATATCCTTTGTTCATCAATCAGAGTGCAACTGTTTTATCATGAACGGGAGCATGGACATGACTGTCAGAAAATGCAGCACACTTCTCTAACCCCCTTCTGTTAACAAGCAAGTGAACAGTATCACCCAAATCCTAAACTTAATCGCTTTTCTTGAGAAGCTCAATCCAATTAACAGCAATGGCCATGTGCAGACAGTAATCAAATCCAATTCCACCGTCTTGGATAGGAATGCAAAAGGTAGGTAATCCACTGATATCTTCACCAATTGTGACAGCCTCGAGATAAAGCCTATGAAACATATCATTCACCAGCAACGAATACACAACATATCATCCGGAGTATATTCAGATTATTCGAAAAATCGGTTGCCATAAAATTACCTTTTAATGGGGAGATAATTTCTATGAGAATTCAAAGGCTCCTTGCTTTCAAATTGAATGGAAAATTTCCCCAAGATTGTATCTTGATGGATAAAGATGCTGGAATAAAACCACATAAATTCTTTTCAACTTTAATGACTGCTGAAGAACACTCTAAACAGTTCAAGGTTTGTGATGAAATTTCCATTAAACCTCCCAAATGGTGGCCAATGGTTTCAAAAACTGAATTCTTCTAAAAGGGCAAGGGCAGGTTCTTGATTGAGATCCAACCTCCATAACTTTTGATAACTTTTGGAAGATAATGATTCTTTTTTAACCTTTGTTCAAACTTCAGATGAAAATCTTCCATATTCGTTCCATTTGGCATCCAAAAAATCAGGATCAATCTCTTTATTTATCTTAATCAAAGCTTTGTCATCCAAATACGGACTAATTGAGATGGAAGCTTGAAAGTATTCTTCCAGAGAAATCTTAATATCAGACCAAGTGTAAAACTCCATTAATCTTGTCACTACTAGCATGGAACTGAAAAGTTTAATTTTTTTTTTTTCTAAAAGGAAACGAGTCTATTCATTGAAATAATGAAATTAAACTAATGCTCAAATTACAATGAGGGATACAAGAGCATAATAACTACAGATCAGTGAGTGTACCCAGACATCTCAACTAGGTTGACACCTTCTTAGCACTCTCATCATTTCCGAACAGAGAACAAAAATTCCAAAGGGGCAAACAACCCAATCAGAACTAAAGTATACCCCGAATACAATGGGGCAAAAAAGCTTAAAACAAAAGAACAAAAACAATATAATAACCATCACAAAAACAAATTAAGTTGAGAAGATAAAAACCTACCAATTCAAACATAGATCTTGAATGCCAAAGTCTTCAAAAGGTTTGGATAGAGTGCACCATGAGGAAGCATTCCGACGAGCTACTTCAAAGCGATCAGGTCATACAAGCTGTTTGTCGTAGAACACCCATTGGTTTTTTGTGTTTGTTTTTTTGTGAGAAGTGAGAGGCGTGTTAGAAGAGAGAAATTTTATATCTTAGAGAGAGTTAAGTTCAGAGAAAGATAAGTTAAGAGAAAAGAATTAAAATTCTAGAGAAAAGTGAGAGATATGTTAGAAGAGAGATTAAAATTCTAGGGAAGTTACTGATATTTTAGTTCTAGTCGGTCAGTTTAAGTTGCTATTCTTGTGAAGTGGAGTAAATTGATTTTTGTTGAGTTAGCTAAGCTATCTTTAGAATTAGAGTCTATATTTATTTTTAGTAGTGATTGAATGAAAATGTACTTTCCCATTTCTCATTAAGAGAGCTTCAGTTGTACCAAGCAACTTCTTAAGAATTTTGGTACAATGGAACGGGAGATGAAAATGGGTCTAACGTTTAAATGAATTTGATTTCTATACGAAGTATGGTAAACAAAATGAATCATATTATATTGTCTTTTTGTTCTGATTTCAAAATAGTTTTGGTGATGGCAATAGTAGAAATTTTATTTTGGTTCTACCAGTTCTCATTCTGGTTCATTCCCATTTCTATTAAATAAATGAAGCGAAAAGTCTATGTTGTATATGTTCCAATGGCTTCTTCACAGGCTAAGTTGTCGCTATATCTGTAAATGTATATTATTCTTCTTTTAATTTAGCTAATAATTTATTTAATTTTATATTGTGCAATCATAGATGAGAAAGAAGGAAATTCTACTAGACGTAGGGGTCGGCCCCGTAAAAAACATACCATACAGGGCAAGAGACTTTTTGATGAGCAAAGTACAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATATACATGATGAAGAGAAGCGAGACGAGGAAGATGAGGAAGAAGTACCACTCATTCATTCAATTAGACCATCCTCTAAATTGAGGTCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACGGGAAAGGTTTCAGGTAACATGTCTGCTTCCCAAATGAAAGTTTTTAAGTATTAATGAAGTATATCTTTTAAATAACTGTTTAGTAAGCTGCTTAAATATACACAGCTTGAGGCATTTGCTGTGGTGAGCCTCATGGTTGATTTTATTATATTATTCAGAAACTACAAGTTTCTTCATACAAATTTTATCTTCACTGCACCTGACACAAATATTGGAAATAACAACCATTCACCTATATTGATATGGGCAATGATTAGGTGCAGCCTAATCCATAAATCCCCTTCTTTCACTCAAAAAAAGAAAATCTTAAAAACAATTTGTTATATATATATATATATATATTTGTCACATGGTAACTTTTTATTGGTAACTATCTGGACTACACAAAAATCAGCACCCAAGTTTTTTTCTATTATTATAGCATGAATCCATGCAACAATATTCTTACCTGCTGTGTACAGTCTTGTATGGCAGAAAAGGATCGAAAAAGTTGTTTCTGATGAAAAGGATATTTGCTTTTCCTCACATAAGATTTGTAGTCAGGTGAAGCCATCTTGGGTCATGTGGTGCTTGGTTGGAGTTGTACTTCAGCCATTTTTGCTCCATGTAATGATTGAATAGTGTTATTTGAAAATGAATAATTCATTTTTGGTTGATCCTTTTCCTGCAAAAGATATTTGCAACACTACTACTATTGATAGTTAATCATACCTACTAGCTGCATGTAGATCTGTAGCAGGTCAATTTCTCTTGTCTTATTGATCTTGTGGGAATCTACACATGATTAACCGTTTTCTTTCTGCAGGGCCACCACCTACATGACTTGAACCGACCCTCTGAATTCTACATCGCATGACTTACCATGGTGTACAAATATCCCCAAATTGAGATATGTAGCAGTTGTGTTTATATTTATATACAAAACGAAATTATGTTGACGTAATCTTAATTGAGAATTTGTTCGTGAACCTTGCTGAAGAATGCTACCTAAGGAGTTGTGGCTATGGTGATAATAGTTGATAATCCTGTTAGCCTCGGACATTTCTGTGATAGCGGTAGAGTACCCCCTCTGTTGCCTCTATTATAATCAGAGGCCTTGTATGATTGTCTCTTGTCTGTCCTGCCTTTTGTTTTTACTTTGTGTGATTTGATCTGGATATTGTGCTATTCTTAGTTCATAATGTAGATCTCACAAAATAATATAACTAATGTTTTAACTAA

mRNA sequence

ATGTACAATGAGAGTGAAGATGAGGATGTAAGTAAAGAATATGTGGAGGAGACAAATAAAGAAGCAATCATGATTGCTGTCGCAAAGTTGGTTGCAAGTGATACAGTTTCTAAGGACTTTTTTGTTGTTGACATTGGTATGATTATTACTGGAGTGGGAGTACTGGAGCCGTGTAACATATATCCCAAAGAGTATCTTGGTCCAGAAATTATTTCTCATTTTCTTATACATGGGACAAGTGTAGCAGATATTGTTAAGCATTTCATTGCCATTTTGAGAAAGAAGGATGGCAATATCCCAGTTATCTTTCTTGAAGCCATGAAAAGAGCCTACCATCGACATACAGTAGAACTCTTGAGAAATAGTGATGGGCCTTCAACAGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGACTTTCTGGAACATATGTAGGTGCAGCTAGGAACAAGCATAGACCAGATATTTTAAAGATCGTTAAGGATGGAGTTGAGTATGCCTTCTCTGACGCACCAATGAATTTATCTTTCCTGGAATGTGCCGTTCTACACTTTGTATCCAAACTGCCTACACCTGATATCCTGGAAATTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGTTGGCGCCCGTATCATACGTTTGTTGACAGCTTGCGTGAAAAGTACGCTAAAAGTGATGGTTTGCAAGATGAGAAAGAAGGAAATTCTACTAGACGTAGGGGTCGGCCCCGTAAAAAACATACCATACAGGGCAAGAGACTTTTTGATGAGCAAAGTACAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATATACATGATGAAGAGAAGCGAGACGAGGAAGATGAGGAAGAAGTACCACTCATTCATTCAATTAGACCATCCTCTAAATTGAGGTCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACGGGAAAGGGCCACCACCTACATGACTTGAACCGACCCTCTGAATTCTACATCGCATGACTTACCATGGTGTACAAATATCCCCAAATTGAGATATGTAGCAGTTGTGTTTATATTTATATACAAAACGAAATTATGTTGACGTAATCTTAATTGAGAATTTGTTCGTGAACCTTGCTGAAGAATGCTACCTAAGGAGTTGTGGCTATGGTGATAATAGTTGATAATCCTGTTAGCCTCGGACATTTCTGTGATAGCGGTAGAGTACCCCCTCTGTTGCCTCTATTATAATCAGAGGCCTTGTATGATTGTCTCTTGTCTGTCCTGCCTTTTGTTTTTACTTTGTGTGATTTGATCTGGATATTGTGCTATTCTTAGTTCATAATGTAGATCTCACAAAATAATATAACTAATGTTTTAACTAA

Coding sequence (CDS)

ATGTACAATGAGAGTGAAGATGAGGATGTAAGTAAAGAATATGTGGAGGAGACAAATAAAGAAGCAATCATGATTGCTGTCGCAAAGTTGGTTGCAAGTGATACAGTTTCTAAGGACTTTTTTGTTGTTGACATTGGTATGATTATTACTGGAGTGGGAGTACTGGAGCCGTGTAACATATATCCCAAAGAGTATCTTGGTCCAGAAATTATTTCTCATTTTCTTATACATGGGACAAGTGTAGCAGATATTGTTAAGCATTTCATTGCCATTTTGAGAAAGAAGGATGGCAATATCCCAGTTATCTTTCTTGAAGCCATGAAAAGAGCCTACCATCGACATACAGTAGAACTCTTGAGAAATAGTGATGGGCCTTCAACAGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGACTTTCTGGAACATATGTAGGTGCAGCTAGGAACAAGCATAGACCAGATATTTTAAAGATCGTTAAGGATGGAGTTGAGTATGCCTTCTCTGACGCACCAATGAATTTATCTTTCCTGGAATGTGCCGTTCTACACTTTGTATCCAAACTGCCTACACCTGATATCCTGGAAATTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGTTGGCGCCCGTATCATACGTTTGTTGACAGCTTGCGTGAAAAGTACGCTAAAAGTGATGGTTTGCAAGATGAGAAAGAAGGAAATTCTACTAGACGTAGGGGTCGGCCCCGTAAAAAACATACCATACAGGGCAAGAGACTTTTTGATGAGCAAAGTACAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATATACATGATGAAGAGAAGCGAGACGAGGAAGATGAGGAAGAAGTACCACTCATTCATTCAATTAGACCATCCTCTAAATTGAGGTCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACGGGAAAGGGCCACCACCTACATGACTTGAACCGACCCTCTGAATTCTACATCGCATGA

Protein sequence

MYNESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGKGHHLHDLNRPSEFYIA

Homology

[Close]

BLAST of Lsi06G000050 vs. Swiss-Prot
Match: SCC3_ARATH (Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 2.7e-71
Identity = 153/319 (47.96%), Postives = 208/319 (65.20%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+++ED +KEY+EETN++  +IA  KLVASD V                         P
Sbjct: 812  DETDEEDENKEYIEETNRDVSVIAACKLVASDVV-------------------------P 871

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            K+YLGPEIISH  +HG  V  I+K+ I  LRKK+ +I  I+LE++KRAYHR++ EL    
Sbjct: 872  KDYLGPEIISHLGMHGPGVTGIIKNLITFLRKKEDDISNIYLESLKRAYHRYSSELSSGR 931

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            +     K   E RELA  LSG Y+GAARNK+R +IL +VK+GVE+AF DAP  L FLE A
Sbjct: 932  EESRVDKCLEEWRELAGGLSGMYIGAARNKYRLEILSVVKEGVEFAFRDAPKQLLFLEVA 991

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            +L F ++L   DI++I KDVQ R  ++NTDEDPSGWRP  TF+++L EK  K++ LQD+K
Sbjct: 992  ILPFATRLSVSDIIDIKKDVQGRIVHVNTDEDPSGWRPCFTFLETLEEKCLKNEDLQDDK 1051

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESIS-ASDHEDIHDEEKRDEEDEEEVPL 302
            E  + RRRGRPRK+   + KRLFDEQS S+++ESIS  SD ED  D         E+ PL
Sbjct: 1052 EAANVRRRGRPRKRPETERKRLFDEQSGSDEDESISGGSDREDKLD---------EDAPL 1096

Query: 303  IHSIRPSSKLRSLRISRDE 321
            I +IR +++ ++L+  R +
Sbjct: 1112 IETIRSAARRKALKGERSK 1096

[Close]

BLAST of Lsi06G000050 vs. TrEMBL
Match: A0A0A0M1E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560785 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.1e-139
Identity = 253/282 (89.72%), Postives = 267/282 (94.68%), Query Frame = 1


Query: 47  MIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEA 106
           +II GVG  EPCN+YP+EYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP IFLEA
Sbjct: 2   IIIGGVGAEEPCNVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEA 61

Query: 107 MKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVE 166
           MKRAYHRHTVEL  NSDGPSTGKSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E
Sbjct: 62  MKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVKDGIE 121

Query: 167 YAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVD 226
           +AFSD P NLSFLECA+LHFVSKL TPDILEIIKDVQNRT NINTDEDPSGWRPYHTFVD
Sbjct: 122 HAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVD 181

Query: 227 SLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIH 286
           SLREKYAKSDGLQDEKEGNSTRRRGRPRKKH +QGKRLFDEQSTSE+EESISASDHED+H
Sbjct: 182 SLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVH 241

Query: 287 DEEKRDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGK 329
           DEEK+DEEDEEEVPLIHSIR SSKLRSLRISR+EKKG+STGK
Sbjct: 242 DEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGK 283

[Close]

BLAST of Lsi06G000050 vs. TrEMBL
Match: A0A067JCH3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22012 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.6e-110
Identity = 211/320 (65.94%), Postives = 257/320 (80.31%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+EDED +KEY+EETN++A++IA AKLVAS TVS                         
Sbjct: 814  DETEDEDSNKEYIEETNRDAVVIAAAKLVASGTVS------------------------- 873

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            KEYL PEIISHF++HGTS+A+IVKH I +++KKD +   IFLEA+KRA+HRH  EL R+ 
Sbjct: 874  KEYLAPEIISHFVMHGTSIAEIVKHLITVIKKKDDDTTNIFLEALKRAHHRHLEELSRSD 933

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            DG S GKSF EC++LAARLS T++GAARNKHR DILKIVK+G+EYAF D+P  LSFLE A
Sbjct: 934  DG-SVGKSFQECKDLAARLSATFMGAARNKHRADILKIVKEGIEYAFIDSPKQLSFLEGA 993

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            VLHFVSKLPT D+LEI+KDVQ+RTEN+NTDEDPSGWRPYHTFVD+LREKYAK+DG  DEK
Sbjct: 994  VLHFVSKLPTSDVLEILKDVQSRTENVNTDEDPSGWRPYHTFVDNLREKYAKNDGFPDEK 1053

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI 302
            EG + RRRGRPRK+  I+GKRLFDE S+SE+E+SIS SD +D+ +EEK+DEE+EEE PLI
Sbjct: 1054 EGTTVRRRGRPRKRQNIEGKRLFDEHSSSEEEDSISGSD-QDVQEEEKQDEEEEEEAPLI 1106

Query: 303  HSIRPSSKLRSLRISRDEKK 323
            HS R SSKLRSL++SRDE +
Sbjct: 1114 HSFRSSSKLRSLKVSRDENR 1106

[Close]

BLAST of Lsi06G000050 vs. TrEMBL
Match: V4U5I1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018593mg PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-108
Identity = 204/321 (63.55%), Postives = 258/321 (80.37%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+EDEDV+KEY+EETN++A+MIA AKL+A D+V                         P
Sbjct: 786  DETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSV-------------------------P 845

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            KEYLGPEIISHF++HGT+VA+IVKH I +L+KKD ++  IFLEA+KRAY RH VE+ R+ 
Sbjct: 846  KEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDEDVSTIFLEALKRAYQRHAVEISRSD 905

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            D   T KSF+EC+EL++RLSGTYVGAARNKHR DILK VK+G++YAF DAP  LSFLECA
Sbjct: 906  DKSLTEKSFVECKELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFLDAPKQLSFLECA 965

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            VLHFVSKLPTPDIL+I+KDVQ RT+N+N DEDPSGWRP+ +FV++LREKY K++G+Q+EK
Sbjct: 966  VLHFVSKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETLREKYTKNEGIQEEK 1025

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDE-EKRDEEDEEEVPL 302
            E  + RRRGRPRKK  I+GKRLFDE S+SE+E+SISASD E   DE +K++EE+E+E PL
Sbjct: 1026 EAVTVRRRGRPRKKRNIEGKRLFDEHSSSEEEDSISASDQEVAQDEDDKQEEEEEDEAPL 1081

Query: 303  IHSIRPSSKLRSLRISRDEKK 323
            IHSIR S+KLR+LR+SR++ K
Sbjct: 1086 IHSIRSSAKLRALRVSREDNK 1081

[Close]

BLAST of Lsi06G000050 vs. TrEMBL
Match: V4TV94_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018593mg PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-108
Identity = 204/321 (63.55%), Postives = 258/321 (80.37%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+EDEDV+KEY+EETN++A+MIA AKL+A D+V                         P
Sbjct: 822  DETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSV-------------------------P 881

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            KEYLGPEIISHF++HGT+VA+IVKH I +L+KKD ++  IFLEA+KRAY RH VE+ R+ 
Sbjct: 882  KEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDEDVSTIFLEALKRAYQRHAVEISRSD 941

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            D   T KSF+EC+EL++RLSGTYVGAARNKHR DILK VK+G++YAF DAP  LSFLECA
Sbjct: 942  DKSLTEKSFVECKELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFLDAPKQLSFLECA 1001

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            VLHFVSKLPTPDIL+I+KDVQ RT+N+N DEDPSGWRP+ +FV++LREKY K++G+Q+EK
Sbjct: 1002 VLHFVSKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETLREKYTKNEGIQEEK 1061

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDE-EKRDEEDEEEVPL 302
            E  + RRRGRPRKK  I+GKRLFDE S+SE+E+SISASD E   DE +K++EE+E+E PL
Sbjct: 1062 EAVTVRRRGRPRKKRNIEGKRLFDEHSSSEEEDSISASDQEVAQDEDDKQEEEEEDEAPL 1117

Query: 303  IHSIRPSSKLRSLRISRDEKK 323
            IHSIR S+KLR+LR+SR++ K
Sbjct: 1122 IHSIRSSAKLRALRVSREDNK 1117

[Close]

BLAST of Lsi06G000050 vs. TrEMBL
Match: A0A067HH80_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001174mg PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-108
Identity = 204/321 (63.55%), Postives = 258/321 (80.37%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+EDEDV+KEY+EETN++A+MIA AKL+A D+V                         P
Sbjct: 786  DETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSV-------------------------P 845

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            KEYLGPEIISHF++HGT+VA+IVKH I +L+KKD ++  IFLEA+KRAY RH VE+ R+ 
Sbjct: 846  KEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDEDVSTIFLEALKRAYQRHAVEISRSD 905

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            D   T KSF+EC+EL++RLSGTYVGAARNKHR DILK VK+G++YAF DAP  LSFLECA
Sbjct: 906  DKSLTEKSFVECKELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFLDAPKQLSFLECA 965

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            VLHFVSKLPTPDIL+I+KDVQ RT+N+N DEDPSGWRP+ +FV++LREKY K++G+Q+EK
Sbjct: 966  VLHFVSKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETLREKYTKNEGIQEEK 1025

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDE-EKRDEEDEEEVPL 302
            E  + RRRGRPRKK  I+GKRLFDE S+SE+E+SISASD E   DE +K++EE+E+E PL
Sbjct: 1026 EAVTVRRRGRPRKKRNIEGKRLFDEHSSSEEEDSISASDQEVAQDEDDKQEEEEEDEAPL 1081

Query: 303  IHSIRPSSKLRSLRISRDEKK 323
            IHSIR S+KLR+LR+SR++ K
Sbjct: 1086 IHSIRSSAKLRALRVSREDNK 1081

[Close]

BLAST of Lsi06G000050 vs. TAIR10
Match: AT2G47980.1 (AT2G47980.1 sister-chromatid cohesion protein 3)

HSP 1 Score: 270.4 bits (690), Expect = 1.5e-72
Identity = 153/319 (47.96%), Postives = 208/319 (65.20%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+++ED +KEY+EETN++  +IA  KLVASD V                         P
Sbjct: 812  DETDEEDENKEYIEETNRDVSVIAACKLVASDVV-------------------------P 871

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            K+YLGPEIISH  +HG  V  I+K+ I  LRKK+ +I  I+LE++KRAYHR++ EL    
Sbjct: 872  KDYLGPEIISHLGMHGPGVTGIIKNLITFLRKKEDDISNIYLESLKRAYHRYSSELSSGR 931

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            +     K   E RELA  LSG Y+GAARNK+R +IL +VK+GVE+AF DAP  L FLE A
Sbjct: 932  EESRVDKCLEEWRELAGGLSGMYIGAARNKYRLEILSVVKEGVEFAFRDAPKQLLFLEVA 991

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            +L F ++L   DI++I KDVQ R  ++NTDEDPSGWRP  TF+++L EK  K++ LQD+K
Sbjct: 992  ILPFATRLSVSDIIDIKKDVQGRIVHVNTDEDPSGWRPCFTFLETLEEKCLKNEDLQDDK 1051

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESIS-ASDHEDIHDEEKRDEEDEEEVPL 302
            E  + RRRGRPRK+   + KRLFDEQS S+++ESIS  SD ED  D         E+ PL
Sbjct: 1052 EAANVRRRGRPRKRPETERKRLFDEQSGSDEDESISGGSDREDKLD---------EDAPL 1096

Query: 303  IHSIRPSSKLRSLRISRDE 321
            I +IR +++ ++L+  R +
Sbjct: 1112 IETIRSAARRKALKGERSK 1096

[Close]

BLAST of Lsi06G000050 vs. NCBI nr
Match: gi|778662200|ref|XP_011659512.1| (PREDICTED: sister-chromatid cohesion protein 3 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 2.3e-142
Identity = 271/326 (83.13%), Postives = 285/326 (87.42%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E EDE  SKEYVEETNK+AIMIA +KLVASDTVSK                        
Sbjct: 834  DECEDEGASKEYVEETNKDAIMIAASKLVASDTVSK------------------------ 893

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
             EYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP IFLEAMKRAYHRHTVEL  NS
Sbjct: 894  -EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNS 953

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            DGPSTGKSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSD P NLSFLECA
Sbjct: 954  DGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVKDGIEHAFSDVPKNLSFLECA 1013

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            +LHFVSKL TPDILEIIKDVQNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK
Sbjct: 1014 ILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 1073

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI 302
            EGNSTRRRGRPRKKH +QGKRLFDEQSTSE+EESISASDHED+HDEEK+DEEDEEEVPLI
Sbjct: 1074 EGNSTRRRGRPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLI 1133

Query: 303  HSIRPSSKLRSLRISRDEKKGSSTGK 329
            HSIR SSKLRSLRISR+EKKG+STGK
Sbjct: 1134 HSIRSSSKLRSLRISREEKKGTSTGK 1134

[Close]

BLAST of Lsi06G000050 vs. NCBI nr
Match: gi|659099245|ref|XP_008450503.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 510.8 bits (1314), Expect = 1.9e-141
Identity = 271/326 (83.13%), Postives = 285/326 (87.42%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E EDE  SKEYVEETNK+AIMIA +KLVASDTVSK                        
Sbjct: 832  DECEDEGASKEYVEETNKDAIMIAASKLVASDTVSK------------------------ 891

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
             EYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+IFLEAMKRAYHRHTVEL RNS
Sbjct: 892  -EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPIIFLEAMKRAYHRHTVELSRNS 951

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            DGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC 
Sbjct: 952  DGPSTSKSFLECRELAARLSGTYVGAARNKHRLDILKIVKDGIEHAFSDAPKNLSFLECV 1011

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            +LHFVSKL TPDILEIIKDVQNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK
Sbjct: 1012 ILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 1071

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI 302
            EGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Sbjct: 1072 EGNSTRRRGRPRKKHNIQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEED-EEVPLI 1131

Query: 303  HSIRPSSKLRSLRISRDEKKGSSTGK 329
            HSIR SSKLRSLRISR+EKKG+STGK
Sbjct: 1132 HSIRSSSKLRSLRISREEKKGTSTGK 1131

[Close]

BLAST of Lsi06G000050 vs. NCBI nr
Match: gi|700210900|gb|KGN65996.1| (hypothetical protein Csa_1G560785 [Cucumis sativus])

HSP 1 Score: 503.4 bits (1295), Expect = 3.0e-139
Identity = 253/282 (89.72%), Postives = 267/282 (94.68%), Query Frame = 1


Query: 47  MIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEA 106
           +II GVG  EPCN+YP+EYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP IFLEA
Sbjct: 2   IIIGGVGAEEPCNVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEA 61

Query: 107 MKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVE 166
           MKRAYHRHTVEL  NSDGPSTGKSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E
Sbjct: 62  MKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVKDGIE 121

Query: 167 YAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVD 226
           +AFSD P NLSFLECA+LHFVSKL TPDILEIIKDVQNRT NINTDEDPSGWRPYHTFVD
Sbjct: 122 HAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVD 181

Query: 227 SLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIH 286
           SLREKYAKSDGLQDEKEGNSTRRRGRPRKKH +QGKRLFDEQSTSE+EESISASDHED+H
Sbjct: 182 SLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVH 241

Query: 287 DEEKRDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGK 329
           DEEK+DEEDEEEVPLIHSIR SSKLRSLRISR+EKKG+STGK
Sbjct: 242 DEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGK 283

[Close]

BLAST of Lsi06G000050 vs. NCBI nr
Match: gi|802794865|ref|XP_012092345.1| (PREDICTED: sister-chromatid cohesion protein 3 [Jatropha curcas])

HSP 1 Score: 406.0 bits (1042), Expect = 6.6e-110
Identity = 211/320 (65.94%), Postives = 257/320 (80.31%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+EDED +KEY+EETN++A++IA AKLVAS TVS                         
Sbjct: 814  DETEDEDSNKEYIEETNRDAVVIAAAKLVASGTVS------------------------- 873

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            KEYL PEIISHF++HGTS+A+IVKH I +++KKD +   IFLEA+KRA+HRH  EL R+ 
Sbjct: 874  KEYLAPEIISHFVMHGTSIAEIVKHLITVIKKKDDDTTNIFLEALKRAHHRHLEELSRSD 933

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            DG S GKSF EC++LAARLS T++GAARNKHR DILKIVK+G+EYAF D+P  LSFLE A
Sbjct: 934  DG-SVGKSFQECKDLAARLSATFMGAARNKHRADILKIVKEGIEYAFIDSPKQLSFLEGA 993

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEK 242
            VLHFVSKLPT D+LEI+KDVQ+RTEN+NTDEDPSGWRPYHTFVD+LREKYAK+DG  DEK
Sbjct: 994  VLHFVSKLPTSDVLEILKDVQSRTENVNTDEDPSGWRPYHTFVDNLREKYAKNDGFPDEK 1053

Query: 243  EGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI 302
            EG + RRRGRPRK+  I+GKRLFDE S+SE+E+SIS SD +D+ +EEK+DEE+EEE PLI
Sbjct: 1054 EGTTVRRRGRPRKRQNIEGKRLFDEHSSSEEEDSISGSD-QDVQEEEKQDEEEEEEAPLI 1106

Query: 303  HSIRPSSKLRSLRISRDEKK 323
            HS R SSKLRSL++SRDE +
Sbjct: 1114 HSFRSSSKLRSLKVSRDENR 1106

[Close]

BLAST of Lsi06G000050 vs. NCBI nr
Match: gi|1009147903|ref|XP_015891658.1| (PREDICTED: sister-chromatid cohesion protein 3 [Ziziphus jujuba])

HSP 1 Score: 400.6 bits (1028), Expect = 2.8e-108
Identity = 209/322 (64.91%), Postives = 259/322 (80.43%), Query Frame = 1


Query: 3    NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYP 62
            +E+EDED +KEYVEETN++A+MIA AKLVAS+TVS                         
Sbjct: 828  DETEDEDANKEYVEETNRDAVMIAAAKLVASETVS------------------------- 887

Query: 63   KEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNS 122
            KEYLGPEIISHF++HGTSVA+IVKH I +L+KKD ++P IFLEA+K+AYHR+ VE ++  
Sbjct: 888  KEYLGPEIISHFVMHGTSVAEIVKHLITVLKKKDCDLPNIFLEALKKAYHRYMVEHIKGD 947

Query: 123  DGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECA 182
            D     K F EC+ELAARLSGT++GAARNKHR DILKIVK G+E+AF DAP  LSFLE +
Sbjct: 948  DESLANKYFQECKELAARLSGTFIGAARNKHRLDILKIVKYGIEHAFIDAPKQLSFLEGS 1007

Query: 183  VLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQ--D 242
            VLHFVSKLPTPDIL+++KDVQ RTE+++TDEDPSGWRPY+TFVD+LREKYAK++G Q  D
Sbjct: 1008 VLHFVSKLPTPDILDVMKDVQKRTESVDTDEDPSGWRPYYTFVDNLREKYAKNEGFQVGD 1067

Query: 243  EKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVP 302
            EKEG + R+RGRPRK+  IQGK+LFDE S+SE+E+SIS SDHED  +E+K+D+E EE+ P
Sbjct: 1068 EKEGMTVRKRGRPRKQRNIQGKKLFDEHSSSEEEDSISVSDHEDAQEEQKQDDEVEEDAP 1124

Query: 303  LIHSIRPSSKLRSLRISRDEKK 323
            LI+SIR SSKLRSLR+SR+EKK
Sbjct: 1128 LINSIRSSSKLRSLRVSREEKK 1124

The following BLAST results are available for this feature:

BLAST of Lsi06G000050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCC3_ARATH	2.7e-71	47.96	Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2	[more]

BLAST of Lsi06G000050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1E7_CUCSA	2.1e-139	89.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560785 PE=4 SV=1	[more]
A0A067JCH3_JATCU	4.6e-110	65.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22012 PE=4 SV=1	[more]
V4U5I1_9ROSI	3.3e-108	63.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018593mg PE=4 SV=1	[more]
V4TV94_9ROSI	3.3e-108	63.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018593mg PE=4 SV=1	[more]
A0A067HH80_CITSI	3.3e-108	63.55	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001174mg PE=4 SV=1	[more]

BLAST of Lsi06G000050 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47980.1	1.5e-72	47.96	sister-chromatid cohesion protein 3	[more]

BLAST of Lsi06G000050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662200\|ref\|XP_011659512.1\|	2.3e-142	83.13	PREDICTED: sister-chromatid cohesion protein 3 [Cucumis sativus]	[more]
gi\|659099245\|ref\|XP_008450503.1\|	1.9e-141	83.13	PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo]	[more]
gi\|700210900\|gb\|KGN65996.1\|	3.0e-139	89.72	hypothetical protein Csa_1G560785 [Cucumis sativus]	[more]
gi\|802794865\|ref\|XP_012092345.1\|	6.6e-110	65.94	PREDICTED: sister-chromatid cohesion protein 3 [Jatropha curcas]	[more]
gi\|1009147903\|ref\|XP_015891658.1\|	2.8e-108	64.91	PREDICTED: sister-chromatid cohesion protein 3 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051455	attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation
biological_process	GO:0051754	meiotic sister chromatid cohesion, centromeric
biological_process	GO:0008150	biological_process
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0007129	synapsis
biological_process	GO:0006396	RNA processing
biological_process	GO:0033044	regulation of chromosome organization
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0010638	positive regulation of organelle organization
biological_process	GO:0007067	mitotic nuclear division
biological_process	GO:0009630	gravitropism
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006325	chromatin organization
biological_process	GO:0009887	animal organ morphogenesis
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G000050.1	Lsi06G000050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11199	STROMAL ANTIGEN	coord: 4..32 score: 5.4E-105coord: 58..324 score: 5.4E
None	No IPR available	PANTHER	PTHR11199:SF0	LD34181P-RELATED	coord: 4..32 score: 5.4E-105coord: 58..324 score: 5.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G000050	CSPI01G25720	Wild cucumber (PI 183967)	cpilsiB067
Lsi06G000050	Cla005129	Watermelon (97103) v1	lsiwmB396
Lsi06G000050	MELO3C015234	Melon (DHL92) v3.5.1	lsimeB409
Lsi06G000050	ClCG03G018060	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G000050	CsGy1G025040	Cucumber (Gy14) v2	cgyblsiB066

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G000050	Melon (DHL92) v3.6.1	lsimedB430
Lsi06G000050	Cucumber (Chinese Long) v3	cuclsiB079
Lsi06G000050	Watermelon (97103) v2	lsiwmbB365
Lsi06G000050	Wax gourd	lsiwgoB522
Lsi06G000050	Cucurbita moschata (Rifu)	cmolsiB122