Cla005087 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005087
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	SAUR-like auxin-responsive protein (AHRD V1 -- Q2V359_ARATH); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein
Location	Chr3 : 2977473 .. 2977904 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGTCTAGAACCATGAAGAAAAAGAATGGAATCAAGGTCGTGGTTGAGAAGCTCCAAAAGAGCCTATCGCGAGGTCGAAAACCGATTAATGGGAATAGTAATGAGGATTTCAACGAAGTTGTGGACTCGACTTCGGTCCCGGAGGATGTCAAAGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGAAGCCAAAACGATTTGTAGTTCCATTGAGTTGTTTGACACACCCTATGTTTTTGAGGCTATTGGAGCAAGCAGCTGAGGAGTATGGTTTTGATCATGAAGGTGCATTAACAATCCCATGTCAGCCAAGTGAGGTTGAGAAGATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATACAATTACTTGGGGAACTTTGTGTAAAGCCATCATTCAAAGTTATTGA

mRNA sequence

ATGGCAAAGTCTAGAACCATGAAGAAAAAGAATGGAATCAAGGTCGTGGTTGAGAAGCTCCAAAAGAGCCTATCGCGAGGTCGAAAACCGATTAATGGGAATAGTAATGAGGATTTCAACGAAGTTGTGGACTCGACTTCGGTCCCGGAGGATGTCAAAGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGAAGCCAAAACGATTTGTAGTTCCATTGAGTTGTTTGACACACCCTATGTTTTTGAGGCTATTGGAGCAAGCAGCTGAGGAGTATGGTTTTGATCATGAAGGTGCATTAACAATCCCATGTCAGCCAAGTGAGGTTGAGAAGATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATACAATTACTTGGGGAACTTTGTGTAAAGCCATCATTCAAAGTTATTGA

Coding sequence (CDS)

ATGGCAAAGTCTAGAACCATGAAGAAAAAGAATGGAATCAAGGTCGTGGTTGAGAAGCTCCAAAAGAGCCTATCGCGAGGTCGAAAACCGATTAATGGGAATAGTAATGAGGATTTCAACGAAGTTGTGGACTCGACTTCGGTCCCGGAGGATGTCAAAGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGAAGCCAAAACGATTTGTAGTTCCATTGAGTTGTTTGACACACCCTATGTTTTTGAGGCTATTGGAGCAAGCAGCTGAGGAGTATGGTTTTGATCATGAAGGTGCATTAACAATCCCATGTCAGCCAAGTGAGGTTGAGAAGATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATACAATTACTTGGGGAACTTTGTGTAAAGCCATCATTCAAAGTTATTGA

Protein sequence

MAKSRTMKKKNGIKVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAVVAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKLESKRDSRDTITWGTLCKAIIQSY

Homology

[Close]

BLAST of Cla005087 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.4e-10
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 1


Query: 50  EDVKEGHFAV-VAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPS 109
           +DV +G  A+ V   GE+ +RF+VP+    HP+F++LL++A +EYGFD +G +TIPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 110 EVEKILA 116
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of Cla005087 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.0e-08
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 1


Query: 51  DVKEGHFAVVAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHE-GALTIPCQPSE 110
           D  +G+ AV    GEK KRFV+P+S +  P F  LL QA EE+G+DH  G LTIPC    
Sbjct: 16  DAPKGYLAVYV--GEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEV 75

Query: 111 VEKI 114
            ++I
Sbjct: 76  FQRI 77

[Close]

BLAST of Cla005087 vs. Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.0e-08
Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 51  DVKEGHFAVVAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHE-GALTIPCQPSE 110
           DV +G+ AV    G+K +RF +P+S L  P F  LL QA EE+G+DH  G LTIPC+  E
Sbjct: 25  DVPKGYAAVYV--GDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 111 VEKILA 116
              + A
Sbjct: 85  FLNVTA 88

[Close]

BLAST of Cla005087 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.2e-08
Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 1


Query: 50  EDVKEGHFAVVAVDGEKP---KRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQ 109
           + V  GH A+    G+K     R +VP+    HP+F  LL +A +EYGF HEG +TIPC 
Sbjct: 77  DPVPRGHLAIYV--GQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCL 136

Query: 110 PSEVEKILAEQWKLESKRDSRDTITWGTLCK 138
            S+ E++   + ++ S   SR    WG  C+
Sbjct: 137 YSDFERV---KTRIASGSSSR-VFPWGRHCR 161

[Close]

BLAST of Cla005087 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.2e-08
Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 1


Query: 43  VDSTSVPEDVKEGHFAVVAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHE-GAL 102
           +   S   D  +G+ AV    GEK KRFV+P+S L  P F  LL QA EE+G+DH  G L
Sbjct: 8   IRKASKAADAPKGYLAVYV--GEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGL 67

Query: 103 TIPC 106
           TIPC
Sbjct: 68  TIPC 69

[Close]

BLAST of Cla005087 vs. TrEMBL
Match: A0A0A0LSM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G103250 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-70
Identity = 133/143 (93.01%), Postives = 140/143 (97.90%), Query Frame = 1


Query: 1   MAKSRTMKKKNGIKVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAVV 60
           MAKS+TMKKKN IKVVVEKLQKSLSRGRKPING+ NEDF+E+VDST+VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120
           AVDG++PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL
Sbjct: 61  AVDGKEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

Query: 121 ESKRDSRDTITWGTLCKAIIQSY 144
           ESKRDSRD ITWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAITWGTLCKAIIQSY 143

[Close]

BLAST of Cla005087 vs. TrEMBL
Match: F6GWA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00390 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 93/143 (65.03%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 3   KSRTMKKKNGI---KVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAV 62
           +S + KKKNGI   K+VVEKLQKSLS G+K  + +  +D  EV+DS  VP DVKEGHFAV
Sbjct: 5   RSNSAKKKNGIVRLKIVVEKLQKSLSLGKK--SASDYDDLEEVIDSAYVPPDVKEGHFAV 64

Query: 63  VAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWK 122
           +AVDG++PKRFVVPL+ LTHP FLRLLEQAAEEYGFDHEGALTIPC+PSE+E++LAEQWK
Sbjct: 65  IAVDGQEPKRFVVPLNFLTHPPFLRLLEQAAEEYGFDHEGALTIPCRPSELERLLAEQWK 124

Query: 123 LESKRDSRDTITWGTLCKAIIQS 143
            E  RD    + W + CK +++S
Sbjct: 125 PE--RDHSVGVNWDS-CKTLVKS 142

[Close]

BLAST of Cla005087 vs. TrEMBL
Match: D7SND5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00400 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.7e-40
Identity = 90/135 (66.67%), Postives = 107/135 (79.26%), Query Frame = 1


Query: 3   KSRTMKKKNGI---KVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAV 62
           K  + K+KNGI   K+VVEKLQKSL  GRK  +   N++F +V DST VP DVKEGHFAV
Sbjct: 5   KRTSGKRKNGIVKLKIVVEKLQKSLLLGRK--SACENDEFKDVSDSTYVPADVKEGHFAV 64

Query: 63  VAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWK 122
           +AVD ++PKRFVVPL+ LTHP FL+LLEQAAEEYGFDHEGALTIPC+PSE+E ILAEQW+
Sbjct: 65  IAVDDDEPKRFVVPLNFLTHPTFLKLLEQAAEEYGFDHEGALTIPCRPSELESILAEQWQ 124

Query: 123 LESKRDSRDTITWGT 135
            E  RDS   + WG+
Sbjct: 125 KE--RDSSVGVPWGS 135

[Close]

BLAST of Cla005087 vs. TrEMBL
Match: M5W0P7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013048mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.7e-39
Identity = 99/152 (65.13%), Postives = 112/152 (73.68%), Query Frame = 1


Query: 1   MAKSRTM---KKKNGI---KVVVEKLQKSLSRGR-KPINGNSNEDFNEVVDSTSVPEDVK 60
           M KSRT    KKKN I   KVVVEKLQ+SL  GR KP N +         DST VPEDVK
Sbjct: 1   MEKSRTSSACKKKNSIVKLKVVVEKLQRSLYLGRSKPSNYSD--------DSTRVPEDVK 60

Query: 61  EGHFAVVAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKI 120
           EGHFAV+AVDG++PKRFVV LS LTHP FL+LLEQAAEEYGFDHEGALTIPCQP E+EKI
Sbjct: 61  EGHFAVIAVDGDEPKRFVVALSYLTHPTFLKLLEQAAEEYGFDHEGALTIPCQPRELEKI 120

Query: 121 LAE--QWKLESKRDSRDTITWGTLCKAIIQSY 144
           L +  QW+ E +  S D   WG+ CKA++QSY
Sbjct: 121 LDDDRQWQKEERSSSSDG-NWGS-CKAMVQSY 142

[Close]

BLAST of Cla005087 vs. TrEMBL
Match: A0A068UEQ8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024153001 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-36
Identity = 88/128 (68.75%), Postives = 101/128 (78.91%), Query Frame = 1


Query: 8   KKKNGI---KVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAVVAVDG 67
           KKKNGI   K+V EKLQKSLS G+K    +  ++F EV DST+VP+DVKEGHFAV+AVD 
Sbjct: 10  KKKNGIVKLKIVAEKLQKSLSLGKKL--ASRADEFEEVNDSTNVPDDVKEGHFAVIAVDD 69

Query: 68  EKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKLESKR 127
           ++ KRFVVPLS LTHP FLRLLEQAAEEYGFD EGALTIPC+PSE+E+ILAE  KL   R
Sbjct: 70  DELKRFVVPLSYLTHPTFLRLLEQAAEEYGFDVEGALTIPCRPSELERILAE--KLVDGR 129

Query: 128 DSRDTITW 133
           DSR    W
Sbjct: 130 DSRANADW 133

[Close]

BLAST of Cla005087 vs. NCBI nr
Match: gi|449459104|ref|XP_004147286.1| (PREDICTED: uncharacterized protein LOC101219191 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-70
Identity = 133/143 (93.01%), Postives = 140/143 (97.90%), Query Frame = 1


Query: 1   MAKSRTMKKKNGIKVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAVV 60
           MAKS+TMKKKN IKVVVEKLQKSLSRGRKPING+ NEDF+E+VDST+VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120
           AVDG++PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL
Sbjct: 61  AVDGKEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

Query: 121 ESKRDSRDTITWGTLCKAIIQSY 144
           ESKRDSRD ITWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAITWGTLCKAIIQSY 143

[Close]

BLAST of Cla005087 vs. NCBI nr
Match: gi|659072037|ref|XP_008463143.1| (PREDICTED: uncharacterized protein LOC103501357 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 4.7e-70
Identity = 132/143 (92.31%), Postives = 139/143 (97.20%), Query Frame = 1


Query: 1   MAKSRTMKKKNGIKVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAVV 60
           MAKS+TMKKKN IKVVVEKLQKSLSRGRKPING+ NEDF+E+VDST+VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120
           AVDGEKP+RFVVPLSCLTHP FLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL
Sbjct: 61  AVDGEKPRRFVVPLSCLTHPTFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

Query: 121 ESKRDSRDTITWGTLCKAIIQSY 144
           ESKRDSRD +TWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAVTWGTLCKAIIQSY 143

[Close]

BLAST of Cla005087 vs. NCBI nr
Match: gi|225436518|ref|XP_002273631.1| (PREDICTED: uncharacterized protein LOC100267173 [Vitis vinifera])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 93/143 (65.03%), Postives = 114/143 (79.72%), Query Frame = 1


Query: 3   KSRTMKKKNGI---KVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAV 62
           +S + KKKNGI   K+VVEKLQKSLS G+K  + +  +D  EV+DS  VP DVKEGHFAV
Sbjct: 5   RSNSAKKKNGIVRLKIVVEKLQKSLSLGKK--SASDYDDLEEVIDSAYVPPDVKEGHFAV 64

Query: 63  VAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWK 122
           +AVDG++PKRFVVPL+ LTHP FLRLLEQAAEEYGFDHEGALTIPC+PSE+E++LAEQWK
Sbjct: 65  IAVDGQEPKRFVVPLNFLTHPPFLRLLEQAAEEYGFDHEGALTIPCRPSELERLLAEQWK 124

Query: 123 LESKRDSRDTITWGTLCKAIIQS 143
            E  RD    + W + CK +++S
Sbjct: 125 PE--RDHSVGVNWDS-CKTLVKS 142

[Close]

BLAST of Cla005087 vs. NCBI nr
Match: gi|645217538|ref|XP_008226298.1| (PREDICTED: uncharacterized protein LOC103325882 [Prunus mume])

HSP 1 Score: 172.2 bits (435), Expect = 6.7e-40
Identity = 101/152 (66.45%), Postives = 114/152 (75.00%), Query Frame = 1


Query: 1   MAKSRTM---KKKNGI---KVVVEKLQKSLSRGR-KPINGNSNEDFNEVVDSTSVPEDVK 60
           MAKSRT    KKKN I   KVVVEKLQ+SLS GR KP N +         DST VPEDVK
Sbjct: 1   MAKSRTSSACKKKNSIVKLKVVVEKLQRSLSLGRSKPSNYSD--------DSTRVPEDVK 60

Query: 61  EGHFAVVAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKI 120
           EGHFAV+AVDG++PKRFVV LS LTHP FL+LLEQAAEEYGFDHEGALTIPCQP E+EKI
Sbjct: 61  EGHFAVIAVDGDEPKRFVVALSYLTHPAFLKLLEQAAEEYGFDHEGALTIPCQPRELEKI 120

Query: 121 LAE--QWKLESKRDSRDTITWGTLCKAIIQSY 144
           L +  QW+ E +  S D   WG+ CKA++QSY
Sbjct: 121 LDDDRQWQKEERGSSSDG-NWGS-CKAMVQSY 142

[Close]

BLAST of Cla005087 vs. NCBI nr
Match: gi|225436516|ref|XP_002273603.1| (PREDICTED: uncharacterized protein LOC100244862 [Vitis vinifera])

HSP 1 Score: 172.2 bits (435), Expect = 6.7e-40
Identity = 90/135 (66.67%), Postives = 107/135 (79.26%), Query Frame = 1


Query: 3   KSRTMKKKNGI---KVVVEKLQKSLSRGRKPINGNSNEDFNEVVDSTSVPEDVKEGHFAV 62
           K  + K+KNGI   K+VVEKLQKSL  GRK  +   N++F +V DST VP DVKEGHFAV
Sbjct: 5   KRTSGKRKNGIVKLKIVVEKLQKSLLLGRK--SACENDEFKDVSDSTYVPADVKEGHFAV 64

Query: 63  VAVDGEKPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWK 122
           +AVD ++PKRFVVPL+ LTHP FL+LLEQAAEEYGFDHEGALTIPC+PSE+E ILAEQW+
Sbjct: 65  IAVDDDEPKRFVVPLNFLTHPTFLKLLEQAAEEYGFDHEGALTIPCRPSELESILAEQWQ 124

Query: 123 LESKRDSRDTITWGT 135
            E  RDS   + WG+
Sbjct: 125 KE--RDSSVGVPWGS 135

The following BLAST results are available for this feature:

BLAST of Cla005087 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU32_ARATH	9.4e-10	43.28	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
AXX15_SOYBN	4.0e-08	48.44	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]
A10A5_SOYBN	4.0e-08	46.97	Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1	[more]
SAU36_ARATH	5.2e-08	37.36	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1	[more]
AX15A_SOYBN	5.2e-08	50.00	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]

BLAST of Cla005087 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSM9_CUCSA	1.9e-70	93.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G103250 PE=4 SV=1	[more]
F6GWA1_VITVI	1.7e-42	65.03	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00390 PE=4 SV=...	[more]
D7SND5_VITVI	4.7e-40	66.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00400 PE=4 SV=...	[more]
M5W0P7_PRUPE	6.7e-39	65.13	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013048mg PE=4 SV=1	[more]
A0A068UEQ8_COFCA	1.4e-36	68.75	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024153001 PE=4 SV=1	[more]

BLAST of Cla005087 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459104\|ref\|XP_004147286.1\|	2.8e-70	93.01	PREDICTED: uncharacterized protein LOC101219191 [Cucumis sativus]	[more]
gi\|659072037\|ref\|XP_008463143.1\|	4.7e-70	92.31	PREDICTED: uncharacterized protein LOC103501357 [Cucumis melo]	[more]
gi\|225436518\|ref\|XP_002273631.1\|	2.5e-42	65.03	PREDICTED: uncharacterized protein LOC100267173 [Vitis vinifera]	[more]
gi\|645217538\|ref\|XP_008226298.1\|	6.7e-40	66.45	PREDICTED: uncharacterized protein LOC103325882 [Prunus mume]	[more]
gi\|225436516\|ref\|XP_002273603.1\|	6.7e-40	66.67	PREDICTED: uncharacterized protein LOC100244862 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU63127	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005087	Cla005087.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU63127	WMU63127	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 27..114 score: 2.1
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 4..117 score: 2.8
None	No IPR available	PANTHER	PTHR31374:SF16	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 4..117 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005087	Cla97C03G053750	Watermelon (97103) v2	wmwmbB124
Cla005087	Csa1G103250	Cucumber (Chinese Long) v2	cuwmB010
Cla005087	MELO3C004966	Melon (DHL92) v3.5.1	mewmB146
Cla005087	ClCG03G002720	Watermelon (Charleston Gray)	wcgwmB223
Cla005087	CmaCh01G005180	Cucurbita maxima (Rimu)	cmawmB429
Cla005087	CmaCh13G002350	Cucurbita maxima (Rimu)	cmawmB185
Cla005087	CmoCh13G002360	Cucurbita moschata (Rifu)	cmowmB173
Cla005087	Lsi03G000070	Bottle gourd (USVL1VR-Ls)	lsiwmB249
Cla005087	Cp4.1LG20g07120	Cucurbita pepo (Zucchini)	cpewmB507
Cla005087	Cp4.1LG02g12710	Cucurbita pepo (Zucchini)	cpewmB548
Cla005087	Carg26250	Silver-seed gourd	carwmB1068
Cla005087	Carg12295	Silver-seed gourd	carwmB0440
Cla005087	Bhi08G000213	Wax gourd	wgowmB482

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005087	Cucurbita moschata (Rifu)	cmowmB422
Cla005087	Cucumber (Gy14) v2	cgybwmB012
Cla005087	Melon (DHL92) v3.6.1	medwmB143
Cla005087	Cucumber (Chinese Long) v3	cucwmB015