Carg12295 (gene) Silver-seed gourd

Overview
NameCarg12295
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAuxin-responsive protein
LocationCucurbita_argyrosperma_scaffold_074 : 130511 .. 130894 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGTTTAGAACCATGAAGAGGAAGATTGGTATCAGAGTGGTCGTCGAGAAGCTGCAAAGGAGGCTATCACGAAGTCGAAAATCGATCAATGGGATTCATAATGAGGATTTCGACATGACTAGGGTGCCGGAGGACGTGAAGGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGGAGGCTAAACGATTCGTCGTTCCGTTGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGGAAGCAGCTGAGGAGTTTGGGTTTGATCATGAAGGTGCATTGGCAATTCCATGTCAGCCAAGTGAAGTTCAGAGGATTTTGGATGAGCAATGGAAGTTGGAGCTTAAAAGAGTCAGGGGAACATCTCAAGGCTAG

mRNA sequence

ATGGCTATGTTTAGAACCATGAAGAGGAAGATTGGTATCAGAGTGGTCGTCGAGAAGCTGCAAAGGAGGCTATCACGAAGTCGAAAATCGATCAATGGGATTCATAATGAGGATTTCGACATGACTAGGGTGCCGGAGGACGTGAAGGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGGAGGCTAAACGATTCGTCGTTCCGTTGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGGAAGCAGCTGAGGAGTTTGGGTTTGATCATGAAGGTGCATTGGCAATTCCATGTCAGCCAAGTGAAGTTCAGAGGATTTTGGATGAGCAATGGAAGTTGGAGCTTAAAAGAGTCAGGGGAACATCTCAAGGCTAG

Coding sequence (CDS)

ATGGCTATGTTTAGAACCATGAAGAGGAAGATTGGTATCAGAGTGGTCGTCGAGAAGCTGCAAAGGAGGCTATCACGAAGTCGAAAATCGATCAATGGGATTCATAATGAGGATTTCGACATGACTAGGGTGCCGGAGGACGTGAAGGAAGGGCATTTTGCGGTGGTGGCGGTGGACGGGGAGGAGGCTAAACGATTCGTCGTTCCGTTGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGGAAGCAGCTGAGGAGTTTGGGTTTGATCATGAAGGTGCATTGGCAATTCCATGTCAGCCAAGTGAAGTTCAGAGGATTTTGGATGAGCAATGGAAGTTGGAGCTTAAAAGAGTCAGGGGAACATCTCAAGGCTAG

Protein sequence

MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKLELKRVRGTSQG
Homology
[Close]
BLAST of Carg12295 vs. NCBI nr
Match: XP_022998661.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 238.8 bits (608), Expect = 1.0e-59
Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDG 60
           MAMFRTMKRK+GI+ VVEKLQRRLSRSRKS NGIHNEDFD TRVPEDVKEGHFAVVAVDG
Sbjct: 1   MAMFRTMKRKMGIKAVVEKLQRRLSRSRKSNNGIHNEDFDTTRVPEDVKEGHFAVVAVDG 60

Query: 61  EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKLELKR 120
           EEAKRF+VPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIPCQPSEVQRILDEQWKLELKR
Sbjct: 61  EEAKRFIVPLSCLTHPMFLRLLEEAAEEYGFDHEGALAIPCQPSEVQRILDEQWKLELKR 120

Query: 121 VRGTSQG 128
           V  TSQG
Sbjct: 121 VGETSQG 127

[Close]
BLAST of Carg12295 vs. NCBI nr
Match: XP_022948822.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDG 60
           MAMFRTMKRKIGIR VVEKLQRRLSRSRKSINGIHNEDFD TRVPEDVKEGHFAVV VDG
Sbjct: 1   MAMFRTMKRKIGIRAVVEKLQRRLSRSRKSINGIHNEDFDTTRVPEDVKEGHFAVVVVDG 60

Query: 61  EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKLELKR 120
           EEAKRFVVPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIPC+PSEVQRILDEQWKLELK+
Sbjct: 61  EEAKRFVVPLSCLTHPMFLRLLEEAAEEYGFDHEGALAIPCKPSEVQRILDEQWKLELKK 120

[Close]
BLAST of Carg12295 vs. NCBI nr
Match: XP_023524585.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-56
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDG 60
           MAMFRT+KRKIGIR VV KLQRRLSRSRK INGIHNEDFD TRVPEDVKEGHFAVVAVDG
Sbjct: 1   MAMFRTVKRKIGIRAVVGKLQRRLSRSRKPINGIHNEDFDTTRVPEDVKEGHFAVVAVDG 60

Query: 61  EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKLELKR 120
           EEAKRFVVPLSCLTHPMFLRLLEEAAEE+GFDHEGALAIPCQPSEVQRILDEQWKLELK+
Sbjct: 61  EEAKRFVVPLSCLTHPMFLRLLEEAAEEYGFDHEGALAIPCQPSEVQRILDEQWKLELKK 120

[Close]
BLAST of Carg12295 vs. NCBI nr
Match: XP_004147286.1 (PREDICTED: uncharacterized protein LOC101219191 [Cucumis sativus] >KGN64798.1 hypothetical protein Csa_1G103250 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 5.4e-45
Identity = 96/124 (77.42%), Postives = 106/124 (85.48%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVV 60
           MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKL 120
           AVDG+E KRFVVPLSCLTHPMFLRLLE+AAEE+GFDHEGAL IPCQPSEV++IL EQWKL
Sbjct: 61  AVDGKEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

[Close]
BLAST of Carg12295 vs. NCBI nr
Match: XP_008463143.1 (PREDICTED: auxin-responsive protein SAUR72-like [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 5.9e-44
Identity = 94/124 (75.81%), Postives = 105/124 (84.68%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVV 60
           MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKL 120
           AVDGE+ +RFVVPLSCLTHP FLRLLE+AAEE+GFDHEGAL IPCQPSEV++IL EQWKL
Sbjct: 61  AVDGEKPRRFVVPLSCLTHPTFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

[Close]
BLAST of Carg12295 vs. TAIR10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 3.1e-23
Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSR--KSINGIHNEDFDMTRVPEDVKEGHFAVVAV 60
           M    + K+K+G  V ++ +  RL + +   S      E++    VP+DVKEGHFAV+AV
Sbjct: 6   MITIESPKKKMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRDCVPKDVKEGHFAVIAV 65

Query: 61  DG--EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQW 115
           DG  E  +RFVVPL  L HPMF +LLE+A EE+GF H+GAL +PC+PS ++ IL EQW
Sbjct: 66  DGYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQW 123

[Close]
BLAST of Carg12295 vs. TAIR10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 4   FRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEA 63
           F+   RK+ I  +  +  +R+    +       E    + +P DVKEGH AV+AV GE  
Sbjct: 5   FKIFMRKLQICCLFTRFSKRVGNYCE----FEEEGNAASMIPSDVKEGHVAVIAVKGERI 64

Query: 64  KRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRIL 111
           KRFV+ L  L  P FLRLLE+A EEFGF   G L IPCQP EVQ+IL
Sbjct: 65  KRFVLELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQPEEVQKIL 107

[Close]
BLAST of Carg12295 vs. TAIR10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 36  NEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEG 95
           N+ +D   +P DV +GHF V    GE+  R++VP+S LTHP F  LL++A EEFGF+H+ 
Sbjct: 28  NQCYDEDGLPVDVPKGHFPVYV--GEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDM 87

Query: 96  ALAIPCQ 103
            L IPC+
Sbjct: 88  GLTIPCE 92

[Close]
BLAST of Carg12295 vs. TAIR10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0 

Query: 10  KIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVP 69
           K+    +++++ +R S   K   G ++ED     +P DV +GHF V    GE   R++VP
Sbjct: 9   KLTQTAMLKQILKRCSSLGKKNGGGYDEDC----LPLDVPKGHFPVYV--GENRSRYIVP 68

Query: 70  LSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC 102
           +S LTHP F  LL+ A EEFGFDH+  L IPC
Sbjct: 69  ISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]
BLAST of Carg12295 vs. TAIR10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 39  FDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHE-GAL 98
           +D   +P DV +GHF V    GE+  R++VP+S LTHP FL LL++A EEFGF H+ G L
Sbjct: 31  YDEEGLPLDVPKGHFPVYV--GEKRTRYIVPISFLTHPEFLILLQQAEEEFGFRHDMGGL 90

Query: 99  AIPCQ 103
            IPC+
Sbjct: 91  TIPCE 93

[Close]
BLAST of Carg12295 vs. Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-12
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0 

Query: 10  KIGIRVVVEKLQRRLSRSRKSINGIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVP 69
           K+    +++++ +R S   K   G ++ED     +P DV +GHF V    GE   R++VP
Sbjct: 9   KLTQTAMLKQILKRCSSLGKKNGGGYDEDC----LPLDVPKGHFPVYV--GENRSRYIVP 68

Query: 70  LSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC 102
           +S LTHP F  LL+ A EEFGFDH+  L IPC
Sbjct: 69  ISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]
BLAST of Carg12295 vs. Swiss-Prot
Match: sp|P0DKL1|SAU50_HELAN (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.9e-12
Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0 

Query: 33  GIHNEDFDMTRVPEDVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFD 92
           G +N+D   + +P DV +GHF V    GE   R++VP+SCL HP F  LL+ + EEFGF+
Sbjct: 27  GKNNDD---SGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFN 86

Query: 93  HEGALAIPCQ 103
           H+  + IPCQ
Sbjct: 87  HDMGIIIPCQ 91

[Close]
BLAST of Carg12295 vs. Swiss-Prot
Match: sp|Q9SL45|SAU10_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLS--RSRKSING-IHNEDFDMTRVPEDVKEGHFAVVA 60
           MA+ R+ K        ++++ +R S  R  K++NG  +N++ D+   P+DV +GHF V  
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDL---PQDVPKGHFPVYV 60

Query: 61  VDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPC 102
             G    R++VP+S L H  F  LL  A EEFGFDH+  L IPC
Sbjct: 61  --GPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPC 99

[Close]
BLAST of Carg12295 vs. Swiss-Prot
Match: sp|Q9ZUZ3|SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0 

Query: 46  EDVKEGHFAV-VAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPS 105
           +DV +G  A+ V   GEE +RF+VP+    HP+F++LL+EA +E+GFD +G + IPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 106 E---VQRILD 112
           E   VQ ++D
Sbjct: 82  EFRYVQALID 91

[Close]
BLAST of Carg12295 vs. Swiss-Prot
Match: sp|P33082|AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 31/64 (48.44%), Postives = 39/64 (60.94%), Query Frame = 0 

Query: 47  DVKEGHFAVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHE-GALAIPCQPSE 106
           D  +G+ AV    GE+ KRFV+P+S +  P F  LL +A EEFG+DH  G L IPC    
Sbjct: 16  DAPKGYLAVYV--GEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEV 75

Query: 107 VQRI 110
            QRI
Sbjct: 76  FQRI 77

[Close]
BLAST of Carg12295 vs. TrEMBL
Match: tr|A0A0A0LSM9|A0A0A0LSM9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G103250 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 96/124 (77.42%), Postives = 106/124 (85.48%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVV 60
           MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKL 120
           AVDG+E KRFVVPLSCLTHPMFLRLLE+AAEE+GFDHEGAL IPCQPSEV++IL EQWKL
Sbjct: 61  AVDGKEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

[Close]
BLAST of Carg12295 vs. TrEMBL
Match: tr|A0A1S3CK34|A0A1S3CK34_CUCME (auxin-responsive protein SAUR72-like OS=Cucumis melo OX=3656 GN=LOC103501357 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-44
Identity = 94/124 (75.81%), Postives = 105/124 (84.68%), Query Frame = 0 

Query: 1   MAMFRTMKRKIGIRVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVV 60
           MA  +TMK+K  I+VVVEKLQ+ LSR RK ING +NEDF    D T VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKL 120
           AVDGE+ +RFVVPLSCLTHP FLRLLE+AAEE+GFDHEGAL IPCQPSEV++IL EQWKL
Sbjct: 61  AVDGEKPRRFVVPLSCLTHPTFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

[Close]
BLAST of Carg12295 vs. TrEMBL
Match: tr|F6GWA1|F6GWA1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00390 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 78/124 (62.90%), Postives = 95/124 (76.61%), Query Frame = 0 

Query: 1   MAMFR--TMKRKIGI---RVVVEKLQRRLSRSRKSINGIHN--EDFDMTRVPEDVKEGHF 60
           MA FR  + K+K GI   ++VVEKLQ+ LS  +KS +   +  E  D   VP DVKEGHF
Sbjct: 1   MAKFRSNSAKKKNGIVRLKIVVEKLQKSLSLGKKSASDYDDLEEVIDSAYVPPDVKEGHF 60

Query: 61  AVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQ 118
           AV+AVDG+E KRFVVPL+ LTHP FLRLLE+AAEE+GFDHEGAL IPC+PSE++R+L EQ
Sbjct: 61  AVIAVDGQEPKRFVVPLNFLTHPPFLRLLEQAAEEYGFDHEGALTIPCRPSELERLLAEQ 120

[Close]
BLAST of Carg12295 vs. TrEMBL
Match: tr|A0A2N9EYY9|A0A2N9EYY9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7656 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.5e-31
Identity = 75/124 (60.48%), Postives = 94/124 (75.81%), Query Frame = 0 

Query: 1   MAMFRTMKRK----IGIRVVVEKLQRRLSRSRKSINGIHNEDFDM---TRVPEDVKEGHF 60
           MA  +T  +K    + +++VV+KLQR L   RKS +     D D+   T VPEDVKEGHF
Sbjct: 1   MAKRKTNSKKRNSIVKLKIVVKKLQRSLLLGRKSSSYRDEYDQDVSDTTSVPEDVKEGHF 60

Query: 61  AVVAVDGEEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQ 118
           +V+AVDG E KRFVVPLS LTHP F+RLLE+AAEE+GFDHEGAL+IPC+PSE++RIL EQ
Sbjct: 61  SVIAVDGNEPKRFVVPLSYLTHPTFVRLLEQAAEEYGFDHEGALSIPCRPSELERILGEQ 120

[Close]
BLAST of Carg12295 vs. TrEMBL
Match: tr|D7SND5|D7SND5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00400 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.5e-30
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 8   KRKIGI---RVVVEKLQRRLSRSRKSINGIHNEDF----DMTRVPEDVKEGHFAVVAVDG 67
           KRK GI   ++VVEKLQ+ L   RKS     N++F    D T VP DVKEGHFAV+AVD 
Sbjct: 10  KRKNGIVKLKIVVEKLQKSLLLGRKS--ACENDEFKDVSDSTYVPADVKEGHFAVIAVDD 69

Query: 68  EEAKRFVVPLSCLTHPMFLRLLEEAAEEFGFDHEGALAIPCQPSEVQRILDEQWKLE 118
           +E KRFVVPL+ LTHP FL+LLE+AAEE+GFDHEGAL IPC+PSE++ IL EQW+ E
Sbjct: 70  DEPKRFVVPLNFLTHPTFLKLLEQAAEEYGFDHEGALTIPCRPSELESILAEQWQKE 124

The following BLAST results are available for this feature:
BLAST of Carg12295 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022998661.11.0e-5992.91auxin-responsive protein SAUR50-like [Cucurbita maxima][more]
XP_022948822.11.2e-5795.00auxin-responsive protein SAUR50-like [Cucurbita moschata][more]
XP_023524585.11.0e-5694.17auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo][more]
XP_004147286.15.4e-4577.42PREDICTED: uncharacterized protein LOC101219191 [Cucumis sativus] >KGN64798.1 hy... [more]
XP_008463143.15.9e-4475.81PREDICTED: auxin-responsive protein SAUR72-like [Cucumis melo][more]
BLAST of Carg12295 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28085.13.1e-2348.31SAUR-like auxin-responsive protein family [more]
AT3G09870.13.6e-1946.73SAUR-like auxin-responsive protein family [more]
AT2G21220.11.0e-1349.25SAUR-like auxin-responsive protein family [more]
AT4G34760.12.9e-1342.39SAUR-like auxin-responsive protein family [more]
AT4G38860.11.1e-1252.31SAUR-like auxin-responsive protein family [more]
BLAST of Carg12295 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O65695|SAU50_ARATH5.3e-1242.39Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
sp|P0DKL1|SAU50_HELAN6.9e-1247.14Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1[more]
sp|Q9SL45|SAU10_ARATH1.7e-1039.42Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1... [more]
sp|Q9ZUZ3|SAU32_ARATH2.2e-1044.29Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S... [more]
sp|P33082|AXX15_SOYBN1.6e-0848.44Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1[more]
BLAST of Carg12295 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSM9|A0A0A0LSM9_CUCSA3.5e-4577.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G103250 PE=4 SV=1[more]
tr|A0A1S3CK34|A0A1S3CK34_CUCME3.9e-4475.81auxin-responsive protein SAUR72-like OS=Cucumis melo OX=3656 GN=LOC103501357 PE=... [more]
tr|F6GWA1|F6GWA1_VITVI1.0e-3162.90Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00390 PE=4 SV=... [more]
tr|A0A2N9EYY9|A0A2N9EYY9_FAGSY6.5e-3160.48Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7656 PE=4 SV=1[more]
tr|D7SND5|D7SND5_VITVI5.5e-3063.25Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00400 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12295-RACarg12295-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availablePANTHERPTHR31374FAMILY NOT NAMEDcoord: 12..118
NoneNo IPR availablePANTHERPTHR31374:SF16AUXIN-RESPONSIVE FAMILY PROTEINcoord: 12..118
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 27..110
e-value: 4.0E-22
score: 78.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12295Cla005087Watermelon (97103) v1carwmB0440
Carg12295Csa1G103250Cucumber (Chinese Long) v2carcuB0472
Carg12295MELO3C004966Melon (DHL92) v3.5.1carmeB0449
Carg12295ClCG03G002720Watermelon (Charleston Gray)carwcgB0436
Carg12295CSPI01G13240Wild cucumber (PI 183967)carcpiB0477
Carg12295Cucsa.207720Cucumber (Gy14) v1carcgyB0511
Carg12295CmaCh01G005180Cucurbita maxima (Rimu)carcmaB0613
Carg12295CmaCh13G002350Cucurbita maxima (Rimu)carcmaB0611
Carg12295CmoCh13G002360Cucurbita moschata (Rifu)carcmoB0594
Carg12295Lsi03G000070Bottle gourd (USVL1VR-Ls)carlsiB404
Carg12295Cp4.1LG20g07120Cucurbita pepo (Zucchini)carcpeB0620
Carg12295Cp4.1LG02g12710Cucurbita pepo (Zucchini)carcpeB0622
Carg12295CsGy1G013350Cucumber (Gy14) v2carcgybB0449
Carg12295MELO3C004966.2Melon (DHL92) v3.6.1carmedB0452
Carg12295CsaV3_1G013410Cucumber (Chinese Long) v3carcucB0474
Carg12295Cla97C03G053750Watermelon (97103) v2carwmbB0467
Carg12295Bhi08G000213Wax gourdcarwgoB0532
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12295Carg02578Silver-seed gourdcarcarB448
Carg12295Carg26250Silver-seed gourdcarcarB450
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12295Cucumber (Gy14) v2carcgybB0451
Carg12295Cucurbita moschata (Rifu)carcmoB0596
Carg12295Wild cucumber (PI 183967)carcpiB0479
Carg12295Cucumber (Chinese Long) v2carcuB0474
Carg12295Cucumber (Chinese Long) v3carcucB0476
Carg12295Watermelon (Charleston Gray)carwcgB0432
Carg12295Watermelon (97103) v1carwmB0439
Carg12295Wax gourdcarwgoB0528