MELO3C024753 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024753
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Transmembrane protein 18
Location	chr11 : 7705808 .. 7707904 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGAAAGCTGAGGTTAAATTTAGGCTGAAAGTTGTCGCCAACAATAATTAGTGGAATTTTCCAGAGGGGTTTTAGAGAAAACGCCGTCCTTTCATAGCATCCGAGCTCGAGGTTTTGGGTCGAACAAGAACCGAAGATCAGAATTCGAAATCTATTATTGAATCTTTCGCATCCTTCGATTTCATATCTACTCATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGTAAAATCCCCATTAAAAAACTTTTATCTTCTTTTGTTCCATCCTTTTTCCTGCTCATTTTGAGTATTGTGTTTTATATATATTTTTTGACATTTTGCAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACGTATGATCTTTTCTCCTATTTGCTCTTTTTGCTGAAATTTAATGACATTGTTCAAGGTTTTCCTATTTTGAGTTCTTTGATTGCTGTTCATATTGCATCCTGGCAAAGTAGTGAGTTTTGATCTAGTAATCAAGGTTAGAGATGAATTCTGAGGTGTGAATATCTTTTTGGAAATTATTTGCTGCATCAAGTTTGCAATTATGTAGTTGTGTTTGCATAATGTACAAATTGCATCCTCTGTACTGGGAAAGTAGTGAATTTTGCTCTAGTGGGTATGAATATATACTACCTCTTGAGCTTAGAGATGAACTCTGAGGTTTGAATGTATTTTTGGAGTCACTGCTGCAAGGTTGCAGTAATAAAATCATAGGATTACATTCGCTGCTTAAGTTGTTGATTAATGTTTCTTATGTTTTGTATGCTTTCAGACCATAGAACTGTTTGGTTTAACTTGGCTGCTTTTTGCTGACTATTTTAATTCAATAGATCTATCTCTCTTTCGGTCTCTTCCGGCTTCTTGTTAAAACTGTAAGATGTATGATCAAATGTTGTCAATGTATGATCCAATGTCGTCTATGTCATATATTTCTCAATTATCCTAGAAAGGAATCCCCTTGAGCACCACACAAATTATTGCATGCTTGTATGCTTGACTGTGGACACATTTCAGATTTACATTTTACATGTTGATGCCACTTTTCATGTATTTCAAGGAGAGGACACCCTTTTTTGCATTCCACAAAAAAATTTTCATGCTTGTTCACATTCATGTTTTGCAAGTTCATTCTCAACTTCAACTGTTCTTCATTTCTAGTGATAAGAAATCCATATTTGGAGTACTTACATTTTTGAATTTGTCATGCAGTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGGCAAGTTTTCGCTATTACTTGTTTTTGTCATGTCCCCGATGAGAACCCCCCATGAATTATTTCTCTTTCATTTATCTGTCGTGTAGTTTTTCGAGTTAAGAACACTTAACTGAACCATCATTTCTGTATGACAGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGACCTCATCAGATAAGTTTTTAGCTTTGATTTCTTTTGCTGGTAGCTTGTAGATCTGTATCTTTTCCTTCACAGAGGTCGTTGGAATTATAGGAATACAATGCTAGGAGCAGTTTTGTTCTCTTTTTTTATTTATTGACTAGAATCTACTTAGATATTGTTGCGATCAACTTTATACAACATTCTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTGATTACTGATTTTATTCACTGAATGTCTTTAATAATTATAGGACTACAATTAATATTTCTTCATCAAGGTTCAACTTTAGTATAGAAGGAAAAT

mRNA sequence

GAATGAAAGCTGAGGTTAAATTTAGGCTGAAAGTTGTCGCCAACAATAATTAGTGGAATTTTCCAGAGGGGTTTTAGAGAAAACGCCGTCCTTTCATAGCATCCGAGCTCGAGGTTTTGGGTCGAACAAGAACCGAAGATCAGAATTCGAAATCTATTATTGAATCTTTCGCATCCTTCGATTTCATATCTACTCATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGACCTCATCAGATAAGTTTTTAGCTTTGATTTCTTTTGCTGGTAGCTTGTAGATCTGTATCTTTTCCTTCACAGAGGTCGTTGGAATTATAGGAATACAATGCTAGGAGCAGTTTTGTTCTCTTTTTTTATTTATTGACTAGAATCTACTTAGATATTGTTGCGATCAACTTTATACAACATTCTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTGATTACTGATTTTATTCACTGAATGTCTTTAATAATTATAGGACTACAATTAATATTTCTTCATCAAGGTTCAACTTTAGTATAGAAGGAAAAT

Coding sequence (CDS)

ATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGA

Protein sequence

MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED*

Homology

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BLAST of MELO3C024753 vs. Swiss-Prot
Match: TMM18_RAT (Transmembrane protein 18 OS=Rattus norvegicus GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ FA
Sbjct: 22  DWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFA 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLL  +M+I+I  +     ++   K  + R + R  + KE+
Sbjct: 82  KYQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRRKEE 140

[Close]

BLAST of MELO3C024753 vs. Swiss-Prot
Match: TMM18_CHICK (Transmembrane protein 18 OS=Gallus gallus GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 1


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GL GFH L  ++T F+ +    Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 26  DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFS 85

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSK 162
              YFD  G+F+S ++  PLLV ++II++N ++    ++   K  + R +A   + K
Sbjct: 86  KYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNVMTELKTLQQRIKAEKDKKK 142

[Close]

BLAST of MELO3C024753 vs. Swiss-Prot
Match: TMM18_HUMAN (Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 4.1e-17
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 1


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWLMGL  FH L +++T  + +    Q+  FL  +  VY AE IN+  + NW+ F+
Sbjct: 22  DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLLV +MII++  ++    ++   K A+ R + +  + KED
Sbjct: 82  KYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED 140

[Close]

BLAST of MELO3C024753 vs. Swiss-Prot
Match: TMM18_BOVIN (Transmembrane protein 18 OS=Bos taurus GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.0e-17
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 1


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GL GFH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 22  DWTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRAR 157
              YFD  G+F+S ++  PLL+ +++I++  L+    LVV      LR + R
Sbjct: 82  KHQYFDSRGMFISLVFSAPLLLNALVIVV--LWVRKTLVVMTDLRSLREQRR 131

[Close]

BLAST of MELO3C024753 vs. Swiss-Prot
Match: TMM18_MOUSE (Transmembrane protein 18 OS=Mus musculus GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 1


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 22  DWTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLL  +M+I+I  +     ++   K  +   + R  + KE+
Sbjct: 82  KYQYFDSRGMFISLVFSAPLLFNAMLIVIMWVRKTLTVMTDLKTLQEERKERRRRRKEE 140

[Close]

BLAST of MELO3C024753 vs. TrEMBL
Match: A0A0A0LN62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431140 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-83
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MELO3C024753 vs. TrEMBL
Match: A0A0B2RE88_GLYSO (Transmembrane protein 18 OS=Glycine soja GN=glysoja_024155 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-70
Identity = 123/163 (75.46%), Postives = 147/163 (90.18%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+EL+SAMEEHMD M+DL+QKLSS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVYFAE +N+ L KNWK F++QNYFDP G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQNYFDPRGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753 vs. TrEMBL
Match: C6T4J9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G156600 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-70
Identity = 123/163 (75.46%), Postives = 147/163 (90.18%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+EL+SAMEEHMD M+DL+QKLSS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVYFAE +N+ L KNWK F++QNYFDP G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQNYFDPRGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753 vs. TrEMBL
Match: A0A0B2NZL1_GLYSO (Transmembrane protein 18 OS=Glycine soja GN=glysoja_000367 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-69
Identity = 122/163 (74.85%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMD M+DL+QK SS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELRSAMEEHMDLMADLVQKFSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVY AE +N+ L KNWK F++QNYFDP+G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYLAESLNRFLGKNWKNFSSQNYFDPSGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753 vs. TrEMBL
Match: I1JD82_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G074600 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-69
Identity = 122/163 (74.85%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMD M+DL+QK SS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELRSAMEEHMDLMADLVQKFSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVY AE +N+ L KNWK F++QNYFDP+G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYLAESLNRFLGKNWKNFSSQNYFDPSGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753 vs. TAIR10
Match: AT1G34350.2 (AT1G34350.2 unknown protein)

HSP 1 Score: 242.3 bits (617), Expect = 2.1e-64
Identity = 114/188 (60.64%), Postives = 141/188 (75.00%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+E+RSAME+ +D ++DL++KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH L
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFA-------------------------LAGVYFAEGINKI 120
           LL++T+ +R+  NF MFLFL A                         +AGVYFAE +N+ 
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLACKFPLKLSIYILYKKSLRSNDLTSLVAGVYFAENLNRE 120

Query: 121 LSKNWKKFATQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRA 164
           L KNWK F+TQNYFD NGVFLS LW GPLLVI+MIILINTLF+LCYL+V+WKRAELRHRA
Sbjct: 121 LRKNWKSFSTQNYFDSNGVFLSTLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRA 180

[Close]

BLAST of MELO3C024753 vs. NCBI nr
Match: gi|659125677|ref|XP_008462809.1| (PREDICTED: transmembrane protein 18 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 2.6e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
           CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MELO3C024753 vs. NCBI nr
Match: gi|778673730|ref|XP_011650049.1| (PREDICTED: transmembrane protein 18 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-83
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MELO3C024753 vs. NCBI nr
Match: gi|351726130|ref|NP_001237116.1| (uncharacterized protein LOC100527513 [Glycine max])

HSP 1 Score: 272.7 bits (696), Expect = 4.2e-70
Identity = 123/163 (75.46%), Postives = 147/163 (90.18%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+EL+SAMEEHMD M+DL+QKLSS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVYFAE +N+ L KNWK F++QNYFDP G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQNYFDPRGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753 vs. NCBI nr
Match: gi|356499000|ref|XP_003518332.1| (PREDICTED: transmembrane protein 18-like [Glycine max])

HSP 1 Score: 270.4 bits (690), Expect = 2.1e-69
Identity = 122/163 (74.85%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMD M+DL+QK SS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELRSAMEEHMDLMADLVQKFSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVY AE +N+ L KNWK F++QNYFDP+G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYLAESLNRFLGKNWKNFSSQNYFDPSGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753 vs. NCBI nr
Match: gi|1012320764|gb|KYP33433.1| (Transmembrane protein 18 [Cajanus cajan])

HSP 1 Score: 270.0 bits (689), Expect = 2.7e-69
Identity = 122/163 (74.85%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+EL+SAMEEHMD M+DL+QK SS+LRSGLRPA DNF+GFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELKSAMEEHMDLMADLVQKFSSDLRSGLRPAYDNFLGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++T  TRK+TNFQMFLFL  LAGVY AE +N+ L KNWK F++QNYFDP+G+F+S LW
Sbjct: 61  LLLVTFITRKKTNFQMFLFLLTLAGVYLAENLNRFLGKNWKSFSSQNYFDPSGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCYL+V WKRAELRHRAR +++K++
Sbjct: 121 SGPLLVISMIILINTLFSLCYLIVSWKRAELRHRARAARNKQE 163

The following BLAST results are available for this feature:

BLAST of MELO3C024753 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TMM18_RAT	1.1e-17	38.66	Transmembrane protein 18 OS=Rattus norvegicus GN=Tmem18 PE=2 SV=1	[more]
TMM18_CHICK	2.4e-17	36.75	Transmembrane protein 18 OS=Gallus gallus GN=TMEM18 PE=2 SV=1	[more]
TMM18_HUMAN	4.1e-17	36.97	Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=1 SV=2	[more]
TMM18_BOVIN	7.0e-17	40.18	Transmembrane protein 18 OS=Bos taurus GN=TMEM18 PE=2 SV=1	[more]
TMM18_MOUSE	1.2e-16	36.97	Transmembrane protein 18 OS=Mus musculus GN=Tmem18 PE=2 SV=1	[more]

BLAST of MELO3C024753 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN62_CUCSA	1.3e-83	96.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431140 PE=4 SV=1	[more]
A0A0B2RE88_GLYSO	2.9e-70	75.46	Transmembrane protein 18 OS=Glycine soja GN=glysoja_024155 PE=4 SV=1	[more]
C6T4J9_SOYBN	2.9e-70	75.46	Uncharacterized protein OS=Glycine max GN=GLYMA_16G156600 PE=2 SV=1	[more]
A0A0B2NZL1_GLYSO	1.4e-69	74.85	Transmembrane protein 18 OS=Glycine soja GN=glysoja_000367 PE=4 SV=1	[more]
I1JD82_SOYBN	1.4e-69	74.85	Uncharacterized protein OS=Glycine max GN=GLYMA_02G074600 PE=4 SV=1	[more]

BLAST of MELO3C024753 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34350.2	2.1e-64	60.64	unknown protein	[more]

BLAST of MELO3C024753 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125677\|ref\|XP_008462809.1\|	2.6e-88	100.00	PREDICTED: transmembrane protein 18 [Cucumis melo]	[more]
gi\|778673730\|ref\|XP_011650049.1\|	1.9e-83	96.32	PREDICTED: transmembrane protein 18 [Cucumis sativus]	[more]
gi\|351726130\|ref\|NP_001237116.1\|	4.2e-70	75.46	uncharacterized protein LOC100527513 [Glycine max]	[more]
gi\|356499000\|ref\|XP_003518332.1\|	2.1e-69	74.85	PREDICTED: transmembrane protein 18-like [Glycine max]	[more]
gi\|1012320764\|gb\|KYP33433.1\|	2.7e-69	74.85	Transmembrane protein 18 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026721	TMEM18

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU47734	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024753T1	MELO3C024753T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU47734	MU47734	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026721	Transmembrane protein 18	PFAM	PF14770	TMEM18	coord: 38..156 score: 4.8
None	No IPR available	unknown	Coil	Coil	coord: 1..25 scor
None	No IPR available	PANTHER	PTHR22593	FAMILY NOT NAMED	coord: 1..163 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024753	Csa2G431140	Cucumber (Chinese Long) v2	cumeB087
MELO3C024753	Cla006790	Watermelon (97103) v1	mewmB125
MELO3C024753	ClCG02G007860	Watermelon (Charleston Gray)	mewcgB090
MELO3C024753	Cla97C02G034530	Watermelon (97103) v2	mewmbB092
MELO3C024753	Bhi10G001224	Wax gourd	mewgoB126
MELO3C024753	CSPI02G27300	Wild cucumber (PI 183967)	cpimeB096
MELO3C024753	Cucsa.017300	Cucumber (Gy14) v1	cgymeB440
MELO3C024753	Lsi10G002100	Bottle gourd (USVL1VR-Ls)	lsimeB053
MELO3C024753	CsGy2G026750	Cucumber (Gy14) v2	cgybmeB083
MELO3C024753	CsaV3_2G035870	Cucumber (Chinese Long) v3	cucmeB103

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024753	Cucurbita moschata (Rifu)	cmomeB483
MELO3C024753	Cucurbita moschata (Rifu)	cmomeB524
MELO3C024753	Cucurbita pepo (Zucchini)	cpemeB260
MELO3C024753	Cucurbita pepo (Zucchini)	cpemeB672
MELO3C024753	Silver-seed gourd	carmeB0935
MELO3C024753	Silver-seed gourd	carmeB1022
MELO3C024753	Cucurbita maxima (Rimu)	cmameB493
MELO3C024753	Cucurbita maxima (Rimu)	cmameB534