WMU77581 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU77581
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNo hit
LocationChr3 : 10097173 .. 10097543 (+)
Sequence length396
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GTAATAGAATACTAACGTGCAAGAAAACTCAGGAATCTCTCCCCTTGTTTTAACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCGCTCGACGTGGTTTCTTATGATTCCATGTGATTTATTCAGTTCTTCTGGGATGATCAAAATTGAATATTTTGCATATGGAAAAAACGGTTCATCTTCGGTGCGCCATGGATGAAAAGACATTGGTGAGTCAGCAAGTATATATTATGCTTTTTGTATGCATTTGTATGTAAATTTGTATGTCAGTGTTCATATTGTGTACATAATGGAAAAATAAGATCGTCTTAAAAGCTCGGTTATGCTGCATAATTTGTATATAGCAGTTTCCCATTTCCTTAGTTTAATTTGAATTTGTACCTTTT
Homology
[Close]
BLAST of WMU77581 vs. NCBI nr
Match: gi|659121126|ref|XP_008460511.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 8.6e-10
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 3 

Query: 33  ESLPLF*QSSMKNIQSSSDCCRSTWFLMIPCDLFSSSGMIKIEYFAYGKNGSSSVRH 92
           + L L  QSSMKNIQSSSDCC ST FLMIP DLFSSSGMIK+    + +NGSS V H
Sbjct: 294 QDLSLVLQSSMKNIQSSSDCCHSTRFLMIPRDLFSSSGMIKLNICIW-QNGSSPVHH 349

Query: 93   152
           
Sbjct: 354  349

Query: 153  204
           
Sbjct: 414  349

The following BLAST results are available for this feature:
BLAST of WMU77581 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121126|ref|XP_008460511.1|8.6e-1068.42PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla019768Cla019768gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S4_0138151S4_0138151EST