WMU59215 (transcribed_cluster) Watermelon (97103) v1

NameWMU59215
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr9 : 25861673 .. 25862087 (-)
Sequence length290
The following sequences are available for this feature:

transcribed_cluster sequence

ACTCGCCGTACTTGATTCCGACTTTGTTAGGGTTAACGGCGGTGAAAATCATCCGAATGTTGAGGGAAAGAGAGGCAGTGGTGGGATTGGGATTGGTTATGCCCATATACTGGACGCCGACCTGCTGGAGATCGAACTTGGGGTTTTTGGTTTGTAGAGCGAGTACGACGACGAGGACGACAGCGAGGATTAAGAGGCGAGAAAGGAGAAGAGGAGGAAGAGCAGCAGCAGCAGTCCTTTGAAGGAGGCGGAGGAGGAGGATCTGGGGTTGGTAGCGAGGGTGGAGGCCG
BLAST of WMU59215 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 80.5 bits (197), Expect = 6.3e-16
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = -2

Query: 2   KNPKFDLQQVGVQYMGITNPN----PTTASLSLNIRMIFTAVNPNKVGIKYGE 61
           K P+FDLQQV V YMGI+NP+    PTTASLSL IRM+FTAVNPNKVGI+YGE
Sbjct: 69  KKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGE 121

Query: 62  121
           
Sbjct: 129 121

Query: 122 149
           
Sbjct: 189 121

BLAST of WMU59215 vs. NCBI nr
Match: gi|659092735|ref|XP_008447191.1| (PREDICTED: uncharacterized protein LOC103489700 isoform X2 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-17
Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = -2

Query: 2   KNPKFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGE 61
           K P+FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKY E
Sbjct: 112 KKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEE 160

Query: 62  121
           
Sbjct: 172 160

Query: 122 149
           
Sbjct: 232 160

BLAST of WMU59215 vs. NCBI nr
Match: gi|659092733|ref|XP_008447190.1| (PREDICTED: uncharacterized protein LOC103489700 isoform X1 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-17
Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = -2

Query: 2   KNPKFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGE 61
           K P+FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKY E
Sbjct: 112 KKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEE 160

Query: 62  121
           
Sbjct: 172 160

Query: 122 149
           
Sbjct: 232 160

BLAST of WMU59215 vs. NCBI nr
Match: gi|449444084|ref|XP_004139805.1| (PREDICTED: uncharacterized protein LOC101207234 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-15
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = -2

Query: 2   KNPKFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGE 61
           K P+FDLQQV VQY+GITNPNPTTASLSLNIRMIFTAVNPNKVGIKY E
Sbjct: 59  KKPQFDLQQVKVQYVGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEE 107

Query: 62  121
           
Sbjct: 119 107

Query: 122 149
           
Sbjct: 179 107

BLAST of WMU59215 vs. NCBI nr
Match: gi|703127528|ref|XP_010103853.1| (hypothetical protein L484_024155 [Morus notabilis])

HSP 1 Score: 85.1 bits (209), Expect = 7.2e-14
Identity = 45/64 (70.31%), Postives = 47/64 (73.44%), Query Frame = -2

Query: 2   KNPKFDLQQVGVQYMGITNPNP---------------TTASLSLNIRMIFTAVNPNKVGI 61
           K P+FDLQQVGVQYMGIT PNP               TTASLSLNIRM+FTAVNPNKVGI
Sbjct: 77  KKPQFDLQQVGVQYMGITAPNPTSAMTTTTDPNPNPTTTASLSLNIRMLFTAVNPNKVGI 136

Query: 62  KYGE 121
           KYGE
Sbjct: 137 KYGE 140

Query: 122 149
           
Sbjct: 197 140

BLAST of WMU59215 vs. NCBI nr
Match: gi|470131281|ref|XP_004301525.1| (PREDICTED: uncharacterized protein LOC101293795 [Fragaria vesca subsp. vesca])

HSP 1 Score: 85.1 bits (209), Expect = 7.2e-14
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -2

Query: 2   KNPKFDLQQVGVQYMGIT----NPNPTTASLSLNIRMIFTAVNPNKVGIKYGE 61
           K P+FDLQQVGVQYMGI     NPNPT+ASLSLNIRM+F+A NPNKVGIKYGE
Sbjct: 83  KKPQFDLQQVGVQYMGINSPDPNPNPTSASLSLNIRMLFSAENPNKVGIKYGE 135

Query: 62  121
           
Sbjct: 143 135

Query: 122 149
           
Sbjct: 203 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G01080.16.3e-1675.47 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
Match NameE-valueIdentityDescription
gi|659092735|ref|XP_008447191.1|4.1e-1793.88PREDICTED: uncharacterized protein LOC103489700 isoform X2 [Cucumis melo][more]
gi|659092733|ref|XP_008447190.1|4.1e-1793.88PREDICTED: uncharacterized protein LOC103489700 isoform X1 [Cucumis melo][more]
gi|449444084|ref|XP_004139805.1|1.0e-1589.80PREDICTED: uncharacterized protein LOC101207234 [Cucumis sativus][more]
gi|703127528|ref|XP_010103853.1|7.2e-1470.31hypothetical protein L484_024155 [Morus notabilis][more]
gi|470131281|ref|XP_004301525.1|7.2e-1479.25PREDICTED: uncharacterized protein LOC101293795 [Fragaria vesca subsp. vesca][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla001975Cla001975gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0013724S2_0013724EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 33..97
score: 4.4
NoneNo IPR availablePANTHERPTHR31234:SF8EXPRESSED PROTEINcoord: 33..97
score: 4.4