WMU53552 (transcribed_cluster) Watermelon (97103) v1

NameWMU53552
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 325833 .. 329395 (+)
Sequence length469
The following sequences are available for this feature:

transcribed_cluster sequence

CTCCAGAAACTATTAGGAATTTTCCCTAACTTTTTGTACCGTAGGGGCTCCTCCCCGTTTATTTTTTCCTTGCCTTGAAGCACATCCTCAATCCTTAAAGTCTGGGTCTGTAGGTGGTCCCTCAATAAGCTTATCTTGTAAGACTAGACTCTTAGGCACTACAAGCTCGGTTCCCTCGCCTGACATGAAAAAATATCTCTCTAGTACCATCATGGCAGCATAGGCATCAATCTTCTTCTGCCGAGTAGATTTATTGAGCCCCGGTAAGAGGACGAGTGGAGAAGCCTTTACTAAGAGCAAGTCCAGTGCGAGAGGTTCCGAGGTCGACCCCTAGACCTGAAACCTCCTCTCCCAGTGAGGGTCGAGCTTGCGGCGAAGGGCGTTGGGGAGGAAGTTCAATGGAGGAAATTGGGTTGTGGCATTTTGCAAATTAGGGTTGGAGATGGAGGCAGAGGAGGAAGGGATAGGG
BLAST of WMU53552 vs. TAIR10
Match: AT1G12244.1 (AT1G12244.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-12
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = -2

Query: 97  GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDF 156
           GL+KS RQ + DAYAA+++LERYF   G G E+++PKSL LQ K+  G P DPDF
Sbjct: 189 GLSKSERQNRSDAYAAVILLERYFSTQGLGIEIILPKSLELQAKIKNGAPVDPDF 243

Query: 157 216
           
Sbjct: 249 243

Query: 217 262
           
Sbjct: 309 243


HSP 2 Score: 40.8 bits (94), Expect = 8.9e-04
Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = -1

Query: 263 LGVDLGTSRTGLALSKGFSTRPLT 322
           LGVDLG SRTG+A+SKG++ +PLT
Sbjct: 84  LGVDLGLSRTGIAISKGYTVKPLT 107

Query: 323 335
           
Sbjct: 144 107

BLAST of WMU53552 vs. NCBI nr
Match: gi|659074761|ref|XP_008437782.1| (PREDICTED: uncharacterized protein LOC103483114 [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 2.4e-22
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = -2

Query: 91  GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 150
           GLNKSTRQKKIDAYAAMMVLERYF MSG+GTEL+VPKSLVLQDKLIEGPPTDPDFKD
Sbjct: 216 GLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 272

Query: 151 210
           
Sbjct: 276 272

Query: 211 262
           
Sbjct: 336 272

BLAST of WMU53552 vs. NCBI nr
Match: gi|449431960|ref|XP_004133768.1| (PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 4.4e-21
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = -2

Query: 91  GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 150
           GLNKSTRQKKIDAYAAMMVLERYF  SG+GTEL+VPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 179 GLNKSTRQKKIDAYAAMMVLERYFSTSGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

Query: 151 210
           
Sbjct: 239 235

Query: 211 262
           
Sbjct: 299 235

BLAST of WMU53552 vs. NCBI nr
Match: gi|645253438|ref|XP_008232575.1| (PREDICTED: uncharacterized protein LOC103331706 [Prunus mume])

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-15
Identity = 44/55 (80.00%), Postives = 46/55 (83.64%), Query Frame = -2

Query: 97  GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDF 156
           GL KS RQ KIDAYAA+MVLERYF MSGEGTELVVPK+L LQDKL  GPP D DF
Sbjct: 183 GLGKSDRQSKIDAYAAVMVLERYFSMSGEGTELVVPKNLDLQDKLRRGPPKDTDF 237

Query: 157 216
           
Sbjct: 243 237

Query: 217 262
           
Sbjct: 303 237

BLAST of WMU53552 vs. NCBI nr
Match: gi|802596489|ref|XP_012072278.1| (PREDICTED: uncharacterized protein LOC105634101 [Jatropha curcas])

HSP 1 Score: 89.0 bits (219), Expect = 8.1e-15
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = -2

Query: 97  GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDF 156
           GL KS RQK +DAYAA+MVLERYF MSGEGTELVVPK L LQDKL +GPP D DF
Sbjct: 179 GLRKSARQKSVDAYAAVMVLERYFCMSGEGTELVVPKQLDLQDKLRKGPPKDLDF 233

Query: 157 216
           
Sbjct: 239 233

Query: 217 262
           
Sbjct: 299 233

BLAST of WMU53552 vs. NCBI nr
Match: gi|596004620|ref|XP_007218316.1| (hypothetical protein PRUPE_ppa010962mg [Prunus persica])

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-14
Identity = 42/55 (76.36%), Postives = 46/55 (83.64%), Query Frame = -2

Query: 97  GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDF 156
           GL KS RQ K+DAYAA+MVLERYF MSG+GTELVVPK+L LQDKL  GPP D DF
Sbjct: 168 GLGKSDRQSKVDAYAAVMVLERYFSMSGQGTELVVPKNLDLQDKLRRGPPKDIDF 222

Query: 157 216
           
Sbjct: 228 222

Query: 217 262
           
Sbjct: 288 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G12244.14.0e-1258.18 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659074761|ref|XP_008437782.1|2.4e-2294.74PREDICTED: uncharacterized protein LOC103483114 [Cucumis melo][more]
gi|449431960|ref|XP_004133768.1|4.4e-2191.23PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus][more]
gi|645253438|ref|XP_008232575.1|4.8e-1580.00PREDICTED: uncharacterized protein LOC103331706 [Prunus mume][more]
gi|802596489|ref|XP_012072278.1|8.1e-1578.18PREDICTED: uncharacterized protein LOC105634101 [Jatropha curcas][more]
gi|596004620|ref|XP_007218316.1|2.4e-1476.36hypothetical protein PRUPE_ppa010962mg [Prunus persica][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021088Cla021088gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0088068S1_0088068EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33317FAMILY NOT NAMEDcoord: 71..125
score: 3.2
NoneNo IPR availablePANTHERPTHR33317:SF2HOLLIDAY JUNCTION RESOLVASE-RELATEDcoord: 71..125
score: 3.2