WMU51439 (transcribed_cluster) Watermelon (97103) v1

NameWMU51439
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionLipid transfer protein
LocationChr7 : 29746315 .. 29746535 (+)
Sequence length221
The following sequences are available for this feature:

transcribed_cluster sequence

CAATCTGGTCGTCATCGTCGAATCCATCGAGCTTTTGCTGCAGTAAGTTGAGAGAGCAACAACCATGCCTCTGTGGGTACATAAGGAACCCATCCTTAAGGCCTTATGTGCAATCTCCTGGCGCTAAATCTGTGGCTTCCAAGTGTGGTGTTCCCCTTCCCCAGCTGCTAGACAAAGGCCCTTCCTTTTGGGATGTGATGCCAAATTTAAGTATGAAATTA
BLAST of WMU51439 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 3.5e-11
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLP 104
           KLREQQPCLCGY+RNP+LR YV SP A+ V++ C +P P
Sbjct: 54  KLREQQPCLCGYMRNPTLRQYVSSPNARKVSNSCKIPSP 92

Query: 105 162
           
Sbjct: 114 92

BLAST of WMU51439 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 5.1e-10
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLPQ 104
           KL+EQ+PCLCGY+RNPSLR +V +P A+ V+  C +P+P+
Sbjct: 56  KLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPR 95

Query: 105 164
           
Sbjct: 116 95

BLAST of WMU51439 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 6.9e-07
Identity = 21/39 (53.85%), Postives = 23/39 (58.97%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLP 104
           KL+EQQPC C YI++P    YV S  AK   + CGVP P
Sbjct: 63  KLKEQQPCFCTYIKDPRYSQYVGSANAKKTLATCGVPYP 101

Query: 105 162
           
Sbjct: 123 101

BLAST of WMU51439 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.0e-06
Identity = 17/40 (42.50%), Postives = 28/40 (70.00%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLPQ 104
           K++EQQ C+C Y++NP+ + ++ SP AK +A+ C  P P+
Sbjct: 58  KVKEQQHCICQYLKNPNFKSFLNSPNAKIIATDCHCPYPK 97

Query: 105 164
           
Sbjct: 118 97

BLAST of WMU51439 vs. TAIR10
Match: AT1G66850.1 (AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 4.5e-06
Identity = 19/39 (48.72%), Postives = 22/39 (56.41%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLP 104
           KL EQQ CLCG+ +NP+   Y+ SP A+ V   C V  P
Sbjct: 62  KLTEQQSCLCGFAKNPAFAQYISSPNARKVLLACNVAYP 100

Query: 105 162
           
Sbjct: 122 100

BLAST of WMU51439 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-12
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLPQ 104
           KLREQ+PCLCGY++NPSLR YV SP A+ +AS CGVP+PQ
Sbjct: 28  KLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQ 67

Query: 105 164
           
Sbjct: 88  67

BLAST of WMU51439 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.1e-09
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLP 104
           KL+ Q+PCLC YI+NPSL+ YV SPGAK V S CGV  P
Sbjct: 59  KLKVQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYP 97

Query: 105 162
           
Sbjct: 119 97

BLAST of WMU51439 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.1e-09
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPL 104
           KL+EQ+PCLCGY+++P+L+ YV SPGA+  AS CGV L
Sbjct: 28  KLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCGVAL 65

Query: 105 159
           
Sbjct: 88  65

BLAST of WMU51439 vs. NCBI nr
Match: gi|388514373|gb|AFK45248.1| (unknown [Lotus japonicus])

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-10
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLPQ 104
           KLREQ+PCLCGY+RNPSL PYV SPGA++VAS CG+P P+
Sbjct: 64  KLREQKPCLCGYLRNPSLAPYVNSPGARAVASTCGIPYPR 103

Query: 105 164
           
Sbjct: 124 103

BLAST of WMU51439 vs. NCBI nr
Match: gi|734371828|gb|KHN19692.1| (Putative non-specific lipid-transfer protein AKCS9 [Glycine soja])

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-10
Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLP 104
           K+REQ+PCLCGY++NPSLRPYV SPG++ VAS CGVP P
Sbjct: 57  KVREQRPCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFP 95

Query: 105 162
           
Sbjct: 117 95

BLAST of WMU51439 vs. NCBI nr
Match: gi|14423789|sp|P82353.1|NLTP2_PRUAR (RecName: Full=Non-specific lipid-transfer protein 2; Short=LTP 2)

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLPQ 104
           KLREQ+PCLCGY++NPSLR YV SP A+ +AS CGVP+PQ
Sbjct: 28  KLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQ 67

Query: 105 164
           
Sbjct: 88  67

BLAST of WMU51439 vs. NCBI nr
Match: gi|645246251|ref|XP_008229267.1| (PREDICTED: non-specific lipid-transfer protein 2 [Prunus mume])

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLPQ 104
           KLREQ+PCLCGY++NPSLR YV SP A+ +AS CGVP+PQ
Sbjct: 58  KLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQ 97

Query: 105 164
           
Sbjct: 118 97

BLAST of WMU51439 vs. NCBI nr
Match: gi|659086721|ref|XP_008444081.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-10
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 3

Query: 45  KLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPLP 104
           KL++Q+ CLCGYI+NP+L PYV SPGAK+VASKCGVP+P
Sbjct: 54  KLKQQKACLCGYIKNPALGPYVNSPGAKNVASKCGVPIP 92

Query: 105 162
           
Sbjct: 114 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G48750.13.5e-1166.67 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G18280.15.1e-1057.50 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38170.16.9e-0753.85 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73780.12.0e-0642.50 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G66850.14.5e-0648.72 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
Match NameE-valueIdentityDescription
NLTP2_PRUAR6.7e-1272.50Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP_VIGUN4.1e-0966.67Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_APIGA9.1e-0963.16Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
Match NameE-valueIdentityDescription
gi|388514373|gb|AFK45248.1|1.3e-1075.00unknown [Lotus japonicus][more]
gi|734371828|gb|KHN19692.1|2.8e-1074.36Putative non-specific lipid-transfer protein AKCS9 [Glycine soja][more]
gi|14423789|sp|P82353.1|NLTP2_PRUAR8.2e-1072.50RecName: Full=Non-specific lipid-transfer protein 2; Short=LTP 2[more]
gi|645246251|ref|XP_008229267.1|8.2e-1072.50PREDICTED: non-specific lipid-transfer protein 2 [Prunus mume][more]
gi|659086721|ref|XP_008444081.1|8.2e-1074.36PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla010775Cla010775gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0052282S1_0052282EST