WMU46448 (transcribed_cluster) Watermelon (97103) v1

NameWMU46448
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionHyccin protein
LocationChr10 : 12405701 .. 12405800 (-)
Sequence length99
The following sequences are available for this feature:

transcribed_cluster sequence

AGCTTCCGTTGCTGTCAGGTGTTTATATGCGAGGGCATCTCATGATTTGGTACCACAGGTAATATTGGCAACTCGGAGTCTTATTCAACTTGACAACAG
BLAST of WMU46448 vs. TAIR10
Match: AT5G64090.1 (AT5G64090.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 48.9 bits (115), Expect = 6.7e-07
Identity = 25/31 (80.65%), Postives = 24/31 (77.42%), Query Frame = 2

Query: 2   ASVAVRCLYARASHDLVPQVILATRSLIQLD 61
           AS AVR LYARASHDL PQ ILATRSL+ LD
Sbjct: 381 ASNAVRSLYARASHDLNPQAILATRSLVNLD 411

Query: 62  95
           
Sbjct: 441 411

BLAST of WMU46448 vs. NCBI nr
Match: gi|659111243|ref|XP_008455651.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103495769 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 7.5e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2

Query: 2   ASVAVRCLYARASHDLVPQVILATRSLIQLDN 61
           ASVAVRCLYARASHDLVPQVILATRSLIQLDN
Sbjct: 364 ASVAVRCLYARASHDLVPQVILATRSLIQLDN 395

Query: 62  98
           
Sbjct: 424 395

BLAST of WMU46448 vs. NCBI nr
Match: gi|449438789|ref|XP_004137170.1| (PREDICTED: uncharacterized protein LOC101215901 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 7.5e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2

Query: 2   ASVAVRCLYARASHDLVPQVILATRSLIQLDN 61
           ASVAVRCLYARASHDLVPQVILATRSLIQLDN
Sbjct: 358 ASVAVRCLYARASHDLVPQVILATRSLIQLDN 389

Query: 62  98
           
Sbjct: 418 389

BLAST of WMU46448 vs. NCBI nr
Match: gi|502142071|ref|XP_004504778.1| (PREDICTED: uncharacterized protein LOC101491587 [Cicer arietinum])

HSP 1 Score: 60.1 bits (144), Expect = 8.3e-07
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 2

Query: 2   ASVAVRCLYARASHDLVPQVILATRSLIQLDN 61
           AS AVRCLYARASHDLVPQ ILATRSLIQLDN
Sbjct: 346 ASFAVRCLYARASHDLVPQAILATRSLIQLDN 377

Query: 62  98
           
Sbjct: 406 377

BLAST of WMU46448 vs. NCBI nr
Match: gi|922370081|ref|XP_013457204.1| (hyccin protein [Medicago truncatula])

HSP 1 Score: 60.1 bits (144), Expect = 8.3e-07
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 2

Query: 2   ASVAVRCLYARASHDLVPQVILATRSLIQLDN 61
           AS AVRCLYARASHDLVPQ ILATRSLIQLDN
Sbjct: 363 ASFAVRCLYARASHDLVPQAILATRSLIQLDN 394

Query: 62  98
           
Sbjct: 423 394

BLAST of WMU46448 vs. NCBI nr
Match: gi|731410559|ref|XP_010657604.1| (PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera])

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-06
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 2

Query: 2   ASVAVRCLYARASHDLVPQVILATRSLIQLD 61
           ASVAVRCLYARASHDLVPQ ILATRSLIQLD
Sbjct: 336 ASVAVRCLYARASHDLVPQAILATRSLIQLD 366

Query: 62  95
           
Sbjct: 396 366

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G64090.16.7e-0780.65 FUNCTIONS IN: molecular_function unknown[more]
Match NameE-valueIdentityDescription
gi|659111243|ref|XP_008455651.1|7.5e-08100.00PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103495769 [Cucumis me... [more]
gi|449438789|ref|XP_004137170.1|7.5e-08100.00PREDICTED: uncharacterized protein LOC101215901 [Cucumis sativus][more]
gi|502142071|ref|XP_004504778.1|8.3e-0793.75PREDICTED: uncharacterized protein LOC101491587 [Cicer arietinum][more]
gi|922370081|ref|XP_013457204.1|8.3e-0793.75hyccin protein [Medicago truncatula][more]
gi|731410559|ref|XP_010657604.1|1.1e-0696.77PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla001109Cla001109gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S3_0063810S3_0063810EST
S3_0132138S3_0132138EST