Cla001109 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001109
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1); contains Interpro domain(s) IPR018619 Hyccin
Location	Chr10 : 12405598 .. 12406125 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGCTGGTCGAAGCTTGAATTCTGCCGATCTGCGGCGTCGTGGGCTGGGCAAGATTGTTGCTGCAAGAGAGAGTTCGATAAAGAGGATGGTTTGGATATTGGTGGGTTTTCAGAGAAAAGGGCGTTGGAGTATGCGGATGAGATAGAAGATGTTTCGGAAGAAACGGATAGACTACAAATTGAGAAGTGTGGGAATAATTCGAATGATTCAGAACCTAAGGGGTCCAGAATTCCACTGCCATGGGAGCTTTTGCAGCCAGTGCTTAGAATTTTAGGACATTGTTTACTGGCTCCTTTGAATTCGCAAGATGTTAAAGATGCAGCTTCCGTTGCTGTCAGGTGTTTATATGCGAGGGCATCTCATGATTTGGTACCACAGGTAATATTGGCAACTCGGAGTCTTATTCAACTTGACAACAGAACTCGTGCGGATGCAAAGGCTGCAGCAGCAGCAAATTCTTCTTCTAATGCTAATACACCCAGCAAAGATAAGAAACCAGAAATCCTATTGGTCTCAAAATAA

mRNA sequence

ATGCCGAGCTGGTCGAAGCTTGAATTCTGCCGATCTGCGGCGTCGTGGGCTGGGCAAGATTGTTGCTGCAAGAGAGAGTTCGATAAAGAGGATGGTTTGGATATTGGTGGGTTTTCAGAGAAAAGGGCGTTGGAGTATGCGGATGAGATAGAAGATGTTTCGGAAGAAACGGATAGACTACAAATTGAGAAGTGTGGGAATAATTCGAATGATTCAGAACCTAAGGGGTCCAGAATTCCACTGCCATGGGAGCTTTTGCAGCCAGTGCTTAGAATTTTAGGACATTGTTTACTGGCTCCTTTGAATTCGCAAGATGTTAAAGATGCAGCTTCCGTTGCTGTCAGGTGTTTATATGCGAGGGCATCTCATGATTTGGTACCACAGGTAATATTGGCAACTCGGAGTCTTATTCAACTTGACAACAGAACTCGTGCGGATGCAAAGGCTGCAGCAGCAGCAAATTCTTCTTCTAATGCTAATACACCCAGCAAAGATAAGAAACCAGAAATCCTATTGGTCTCAAAATAA

Coding sequence (CDS)

ATGCCGAGCTGGTCGAAGCTTGAATTCTGCCGATCTGCGGCGTCGTGGGCTGGGCAAGATTGTTGCTGCAAGAGAGAGTTCGATAAAGAGGATGGTTTGGATATTGGTGGGTTTTCAGAGAAAAGGGCGTTGGAGTATGCGGATGAGATAGAAGATGTTTCGGAAGAAACGGATAGACTACAAATTGAGAAGTGTGGGAATAATTCGAATGATTCAGAACCTAAGGGGTCCAGAATTCCACTGCCATGGGAGCTTTTGCAGCCAGTGCTTAGAATTTTAGGACATTGTTTACTGGCTCCTTTGAATTCGCAAGATGTTAAAGATGCAGCTTCCGTTGCTGTCAGGTGTTTATATGCGAGGGCATCTCATGATTTGGTACCACAGGTAATATTGGCAACTCGGAGTCTTATTCAACTTGACAACAGAACTCGTGCGGATGCAAAGGCTGCAGCAGCAGCAAATTCTTCTTCTAATGCTAATACACCCAGCAAAGATAAGAAACCAGAAATCCTATTGGTCTCAAAATAA

Protein sequence

MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRLQIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYARASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLVSK

Homology

[Close]

BLAST of Cla001109 vs. TrEMBL
Match: A0A0A0KZ90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G107390 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.3e-88
Identity = 166/176 (94.32%), Postives = 167/176 (94.89%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKLEFCRSAASWAGQDCCC REFDKEDG D+GGFSEKRALEY DEIED SEE  RL
Sbjct: 249 MPSWSKLEFCRSAASWAGQDCCCTREFDKEDGFDVGGFSEKRALEYTDEIEDASEEMGRL 308

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
           QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKD ASVAVRCLYAR
Sbjct: 309 QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDEASVAVRCLYAR 368

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAK-AAAAANSSSNANTPSKDKKPEILLVSK 176
           ASHDLVPQVILATRSLIQLDNRTRA AK AAAAANSSSNANTPSKDKKPEILLVSK
Sbjct: 369 ASHDLVPQVILATRSLIQLDNRTRAAAKAAAAAANSSSNANTPSKDKKPEILLVSK 424

[Close]

BLAST of Cla001109 vs. TrEMBL
Match: F6H1N7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g01090 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.0e-61
Identity = 125/175 (71.43%), Postives = 141/175 (80.57%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKL+ C+ AA+WAGQ+C CK EFD  +  +I GFSE R L+  DEIE   EE  +L
Sbjct: 230 MPSWSKLDLCQFAAAWAGQNCPCKAEFDVNENAEIDGFSEVRVLDEGDEIERCVEEVGKL 289

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
            I +   N ++S  KG RIPLPWELLQP LRI+GHCLLAPLNSQDVKDAASVAVRCLYAR
Sbjct: 290 GIVE---NRSNSGFKGVRIPLPWELLQPTLRIIGHCLLAPLNSQDVKDAASVAVRCLYAR 349

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLVSK 176
           ASHDLVPQ ILATRSLIQLD R R  AKAAAAAN++SN+NTPSK KKPE+LLVSK
Sbjct: 350 ASHDLVPQAILATRSLIQLDKRAREAAKAAAAANAASNSNTPSKAKKPEVLLVSK 401

[Close]

BLAST of Cla001109 vs. TrEMBL
Match: A5B3N4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022132 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.4e-59
Identity = 117/173 (67.63%), Postives = 141/173 (81.50%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKL+ CR AA+WAGQ+C CK EFD+++  +I GFSE R L+  +E+E   E+  +L
Sbjct: 230 MPSWSKLDLCRFAAAWAGQNCPCKAEFDRDEDAEIDGFSEIRVLD-GNEVEGCVEDVGKL 289

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
           +I +  +NS    P+G+RIPLPWELLQP LRI+GHCLLAPLNSQDVKDAASVAVRCLYAR
Sbjct: 290 RIAEERSNSG---PEGARIPLPWELLQPTLRIIGHCLLAPLNSQDVKDAASVAVRCLYAR 349

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLV 174
           ASHDL+PQ ILATRSL+QLD R R  AKAAAAAN +SN+NTPSK KKPE+ L+
Sbjct: 350 ASHDLLPQAILATRSLVQLDKRAREAAKAAAAANPASNSNTPSKAKKPEVNLI 398

[Close]

BLAST of Cla001109 vs. TrEMBL
Match: W9QVH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017230 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.9e-58
Identity = 125/189 (66.14%), Postives = 144/189 (76.19%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKED---GLDIGGFSEKRALEYADEIEDVSEET 60
           MP+WSKL+FCR AASWAGQ+C C+++FD +D    +     SE R LE  D+ +DV ++ 
Sbjct: 254 MPAWSKLDFCRFAASWAGQECTCEKQFDDDDDDESVVSSRVSEIRYLENGDQTDDVVDDI 313

Query: 61  DRLQIEKCGNNSNDS------EPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAAS 120
            +L+IE  G  S  S      + KGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKD A+
Sbjct: 314 AQLRIENGGGRSGSSSGGENLDSKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDMAA 373

Query: 121 VAVRCLYARASHDLVPQVILATRSLIQLDNRTRADAKAAA-----AANSSSNANTPSKDK 176
           VAVR LYARASHDLVPQ ILATRSLIQL+ R+RAD +AAA     AAN SSNANTPSK K
Sbjct: 374 VAVRRLYARASHDLVPQAILATRSLIQLEKRSRADVRAAAAAAALAANPSSNANTPSKAK 433

[Close]

BLAST of Cla001109 vs. TrEMBL
Match: A0A059AT41_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02675 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 127/184 (69.02%), Postives = 141/184 (76.63%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYAD------EIEDVS 60
           MPSWSKLE CR AA+WAGQDC C+R+FD ++   + GF   RALE  +      EI+ V 
Sbjct: 195 MPSWSKLELCRFAAAWAGQDCSCRRQFDGDEE-KVDGF---RALEDGNGSEDEIEIDGVV 254

Query: 61  EETDRLQIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAV 120
           E    L IE+ G N    EPKG+RIPLPWELLQPVLRILGHCLLAPLN+++VKDAASVAV
Sbjct: 255 EVVRNLAIEEYGVNL---EPKGARIPLPWELLQPVLRILGHCLLAPLNAKEVKDAASVAV 314

Query: 121 RCLYARASHDLVPQVILATRSLIQLDNRTRADAK---AAAAANSSSNANTPSKDKKPEIL 176
           R LYARASHDLVPQ ILATRSLIQLD R R   K   AAAAAN+SSNANTPSK KKPEIL
Sbjct: 315 RSLYARASHDLVPQAILATRSLIQLDKRAREAVKAVAAAAAANASSNANTPSKAKKPEIL 371

[Close]

BLAST of Cla001109 vs. NCBI nr
Match: gi|449438789|ref|XP_004137170.1| (PREDICTED: uncharacterized protein LOC101215901 [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 4.7e-88
Identity = 166/176 (94.32%), Postives = 167/176 (94.89%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKLEFCRSAASWAGQDCCC REFDKEDG D+GGFSEKRALEY DEIED SEE  RL
Sbjct: 249 MPSWSKLEFCRSAASWAGQDCCCTREFDKEDGFDVGGFSEKRALEYTDEIEDASEEMGRL 308

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
           QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKD ASVAVRCLYAR
Sbjct: 309 QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDEASVAVRCLYAR 368

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAK-AAAAANSSSNANTPSKDKKPEILLVSK 176
           ASHDLVPQVILATRSLIQLDNRTRA AK AAAAANSSSNANTPSKDKKPEILLVSK
Sbjct: 369 ASHDLVPQVILATRSLIQLDNRTRAAAKAAAAAANSSSNANTPSKDKKPEILLVSK 424

[Close]

BLAST of Cla001109 vs. NCBI nr
Match: gi|659111243|ref|XP_008455651.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103495769 [Cucumis melo])

HSP 1 Score: 328.2 bits (840), Expect = 8.9e-87
Identity = 163/175 (93.14%), Postives = 165/175 (94.29%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKL FCRSAASWAGQDCCC REFDKEDGLD+GGFSEKRALEY DEIED SEE  RL
Sbjct: 255 MPSWSKLAFCRSAASWAGQDCCCTREFDKEDGLDVGGFSEKRALEYTDEIEDASEEMGRL 314

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
           QIEKCGNNSNDSEPKGSRIPLPWELLQP+LRILGHCLL PLNSQDVKD ASVAVRCLYAR
Sbjct: 315 QIEKCGNNSNDSEPKGSRIPLPWELLQPILRILGHCLLTPLNSQDVKDEASVAVRCLYAR 374

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLVSK 176
           ASHDLVPQVILATRSLIQLDNRTRA AK AAAANSSSNANTPSKDKKPEILLVSK
Sbjct: 375 ASHDLVPQVILATRSLIQLDNRTRAAAK-AAAANSSSNANTPSKDKKPEILLVSK 428

[Close]

BLAST of Cla001109 vs. NCBI nr
Match: gi|731410559|ref|XP_010657604.1| (PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera])

HSP 1 Score: 243.4 bits (620), Expect = 2.9e-61
Identity = 125/175 (71.43%), Postives = 141/175 (80.57%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKL+ C+ AA+WAGQ+C CK EFD  +  +I GFSE R L+  DEIE   EE  +L
Sbjct: 230 MPSWSKLDLCQFAAAWAGQNCPCKAEFDVNENAEIDGFSEVRVLDEGDEIERCVEEVGKL 289

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
            I +   N ++S  KG RIPLPWELLQP LRI+GHCLLAPLNSQDVKDAASVAVRCLYAR
Sbjct: 290 GIVE---NRSNSGFKGVRIPLPWELLQPTLRIIGHCLLAPLNSQDVKDAASVAVRCLYAR 349

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLVSK 176
           ASHDLVPQ ILATRSLIQLD R R  AKAAAAAN++SN+NTPSK KKPE+LLVSK
Sbjct: 350 ASHDLVPQAILATRSLIQLDKRAREAAKAAAAANAASNSNTPSKAKKPEVLLVSK 401

[Close]

BLAST of Cla001109 vs. NCBI nr
Match: gi|225447921|ref|XP_002265509.1| (PREDICTED: uncharacterized protein LOC100260050 [Vitis vinifera])

HSP 1 Score: 239.2 bits (609), Expect = 5.4e-60
Identity = 121/175 (69.14%), Postives = 142/175 (81.14%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MPSWSKL+ CR AA+WAGQ+C CK EFD+++  +I GFSE R LE  DEIE    +  +L
Sbjct: 230 MPSWSKLDLCRFAAAWAGQNCPCKAEFDRDEDAEIDGFSEIRVLE-GDEIEGCVGDVGKL 289

Query: 61  QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLYAR 120
           +I +  +NS    P+G+RIPLPWELLQP LRI+GHCLLAPLNSQDVKDAASVAVRCLYAR
Sbjct: 290 RITEERSNSG---PEGARIPLPWELLQPTLRIIGHCLLAPLNSQDVKDAASVAVRCLYAR 349

Query: 121 ASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLVSK 176
           ASHDL+PQ ILATRSL+QLD R R  AKAAAAAN +SN+NTPSK KKPE+ LV+K
Sbjct: 350 ASHDLLPQAILATRSLVQLDKRAREAAKAAAAANPASNSNTPSKAKKPEVFLVAK 400

[Close]

BLAST of Cla001109 vs. NCBI nr
Match: gi|694419857|ref|XP_009337864.1| (PREDICTED: uncharacterized protein LOC103930280 [Pyrus x bretschneideri])

HSP 1 Score: 236.1 bits (601), Expect = 4.6e-59
Identity = 125/177 (70.62%), Postives = 140/177 (79.10%), Query Frame = 1


Query: 1   MPSWSKLEFCRSAASWAGQDCCCKREFDKEDGLDIGGFSEKRALEYADEIEDVSEETDRL 60
           MP+WSK++FCR  ASWAGQDC C R+F  +D  +    +    LE +DEI+ V+EE D+L
Sbjct: 252 MPTWSKIDFCRFLASWAGQDCSCLRQFGDDDTNE-PDMNSGLFLEGSDEIDVVTEEMDQL 311

Query: 61  --QIEKCGNNSNDSEPKGSRIPLPWELLQPVLRILGHCLLAPLNSQDVKDAASVAVRCLY 120
             +IEK  +N    EPKGSRIPLPWELLQP LRILGHCLLAPLNSQDVKDAASVAVR LY
Sbjct: 312 TVRIEKPSSNGVHLEPKGSRIPLPWELLQPALRILGHCLLAPLNSQDVKDAASVAVRRLY 371

Query: 121 ARASHDLVPQVILATRSLIQLDNRTRADAKAAAAANSSSNANTPSKDKKPEILLVSK 176
           ARASHDLVPQ ILAT+SLIQLD RTR  AK  AAANSSSNANTPSK KKPE+ LVSK
Sbjct: 372 ARASHDLVPQAILATQSLIQLDKRTREAAKTVAAANSSSNANTPSKAKKPEVFLVSK 427

The following BLAST results are available for this feature:

BLAST of Cla001109 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ90_CUCSA	3.3e-88	94.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G107390 PE=4 SV=1	[more]
F6H1N7_VITVI	2.0e-61	71.43	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g01090 PE=4 SV=...	[more]
A5B3N4_VITVI	9.4e-59	67.63	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022132 PE=4 SV=1	[more]
W9QVH9_9ROSA	7.9e-58	66.14	Uncharacterized protein OS=Morus notabilis GN=L484_017230 PE=4 SV=1	[more]
A0A059AT41_EUCGR	7.4e-56	69.02	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02675 PE=4 SV=1	[more]

BLAST of Cla001109 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438789\|ref\|XP_004137170.1\|	4.7e-88	94.32	PREDICTED: uncharacterized protein LOC101215901 [Cucumis sativus]	[more]
gi\|659111243\|ref\|XP_008455651.1\|	8.9e-87	93.14	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103495769 [Cucumis me...	[more]
gi\|731410559\|ref\|XP_010657604.1\|	2.9e-61	71.43	PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera]	[more]
gi\|225447921\|ref\|XP_002265509.1\|	5.4e-60	69.14	PREDICTED: uncharacterized protein LOC100260050 [Vitis vinifera]	[more]
gi\|694419857\|ref\|XP_009337864.1\|	4.6e-59	70.62	PREDICTED: uncharacterized protein LOC103930280 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018619	Hyccin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015706	nitrate transport
biological_process	GO:0006817	phosphate ion transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0046854	phosphatidylinositol phosphorylation
biological_process	GO:0072659	protein localization to plasma membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005315	inorganic phosphate transmembrane transporter activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU46448	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001109	Cla001109.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU46448	WMU46448	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018619	Hyccin	PFAM	PF09790	Hyccin	coord: 1..147 score: 2.6
None	No IPR available	unknown	Coil	Coil	coord: 43..63 scor
None	No IPR available	PANTHER	PTHR31220	FAMILY NOT NAMED	coord: 62..175 score: 2.0E-89coord: 1..42 score: 2.0
None	No IPR available	PANTHER	PTHR31220:SF2	SUBFAMILY NOT NAMED	coord: 1..42 score: 2.0E-89coord: 62..175 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001109	Cla97C10G192340	Watermelon (97103) v2	wmwmbB060
Cla001109	Csa4G107390	Cucumber (Chinese Long) v2	cuwmB296
Cla001109	MELO3C019024	Melon (DHL92) v3.5.1	mewmB494
Cla001109	ClCG10G009180	Watermelon (Charleston Gray)	wcgwmB060
Cla001109	CSPI04G09180	Wild cucumber (PI 183967)	cpiwmB297
Cla001109	Cucsa.397980	Cucumber (Gy14) v1	cgywmB715
Cla001109	CmaCh04G003890	Cucurbita maxima (Rimu)	cmawmB661
Cla001109	CmoCh04G004140	Cucurbita moschata (Rifu)	cmowmB654
Cla001109	Cp4.1LG14g05030	Cucurbita pepo (Zucchini)	cpewmB208
Cla001109	Cp4.1LG01g03280	Cucurbita pepo (Zucchini)	cpewmB390
Cla001109	CsGy4G008930	Cucumber (Gy14) v2	cgybwmB272
Cla001109	MELO3C019024.2	Melon (DHL92) v3.6.1	medwmB480
Cla001109	Carg08063	Silver-seed gourd	carwmB0367
Cla001109	Carg16802	Silver-seed gourd	carwmB0872
Cla001109	CsaV3_4G009340	Cucumber (Chinese Long) v3	cucwmB306
Cla001109	Bhi11G000846	Wax gourd	wgowmB031

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001109	Cucumber (Gy14) v2	cgybwmB274
Cla001109	Silver-seed gourd	carwmB0871
Cla001109	Cucumber (Chinese Long) v3	cucwmB304
Cla001109	Cucumber (Gy14) v1	cgywmB714
Cla001109	Cucurbita maxima (Rimu)	cmawmB304
Cla001109	Cucurbita moschata (Rifu)	cmowmB292
Cla001109	Wild cucumber (PI 183967)	cpiwmB294
Cla001109	Cucumber (Chinese Long) v2	cuwmB293
Cla001109	Bottle gourd (USVL1VR-Ls)	lsiwmB240
Cla001109	Bottle gourd (USVL1VR-Ls)	lsiwmB242