WMU45759 (transcribed_cluster) Watermelon (97103) v1

NameWMU45759
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 29631021 .. 29631312 (-)
Sequence length290
The following sequences are available for this feature:

transcribed_cluster sequence

AAACGACGCCGCACCAGCAAGAAACGCCGGAGTATAAGCCAAGAGCATTCCGTATTTGGACGAAAGCTTAGTTTCTTCCGATGAATGTTTCGGAACACTATTCGCATTCCAGAACTTGGAATACTGCAAATGCTTACCGTTAATCTCGGAAATTCCAGCCATGGCCATCGCGGTCGAGCTTACTACCGTCATCACGTTCACGAACGTGGAAGGAGGCGGAGGAGAGAAACGCCGACAAAACGTACCATCGCTGCCGAGACTCAGATGGGAAAAAGCTTCTGAAGAAGTTT
BLAST of WMU45759 vs. TAIR10
Match: AT5G16010.1 (AT5G16010.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein)

HSP 1 Score: 77.4 bits (189), Expect = 5.3e-15
Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = -3

Query: 1   PPPPSTFVNVMTVVSSTAMAMAGISEINGKHLQYSKFWNANSVPKHSSEE-TKLSSKYGM 60
           PPPPS  +N M+VV   A+A  G SEI G HL+YSKF  ++S P+   E    +SS+ GM
Sbjct: 10  PPPPSILLNCMSVVGVAALANIGWSEIRGNHLKYSKFGVSSSSPQPQKERFGSISSRNGM 69

Query: 61  LLAYTPAFLAGAASF 120
           LL YTPAFLA A+SF
Sbjct: 70  LLLYTPAFLAAASSF 84

Query: 121 180
           
Sbjct: 130 84

Query: 181 223
           
Sbjct: 190 84

BLAST of WMU45759 vs. NCBI nr
Match: gi|778706250|ref|XP_004135052.2| (PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-27
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = -3

Query: 1   PPPPSTFVNVMTVVSSTAMAMAGISEINGKHLQYSKFWNANSVPKHSSEETKLSSKYGML 60
           PPPPSTFVNVMTVVS+TA+AMAG+SEINGKHLQYSKFWNAN   K S+EE+K+SSKYGML
Sbjct: 30  PPPPSTFVNVMTVVSTTALAMAGLSEINGKHLQYSKFWNANGASKLSAEESKVSSKYGML 89

Query: 61  LAYTPAFLAGAASF 120
           LAYTPAFLAGAASF
Sbjct: 90  LAYTPAFLAGAASF 103

Query: 121 180
           
Sbjct: 150 103

Query: 181 223
           
Sbjct: 210 103

BLAST of WMU45759 vs. NCBI nr
Match: gi|700196982|gb|KGN52159.1| (hypothetical protein Csa_5G612880 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-27
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = -3

Query: 1   PPPPSTFVNVMTVVSSTAMAMAGISEINGKHLQYSKFWNANSVPKHSSEETKLSSKYGML 60
           PPPPSTFVNVMTVVS+TA+AMAG+SEINGKHLQYSKFWNAN   K S+EE+K+SSKYGML
Sbjct: 30  PPPPSTFVNVMTVVSTTALAMAGLSEINGKHLQYSKFWNANGASKLSAEESKVSSKYGML 89

Query: 61  LAYTPAFLAGAASF 120
           LAYTPAFLAGAASF
Sbjct: 90  LAYTPAFLAGAASF 103

Query: 121 180
           
Sbjct: 150 103

Query: 181 223
           
Sbjct: 210 103

BLAST of WMU45759 vs. NCBI nr
Match: gi|659091769|ref|XP_008446722.1| (PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-26
Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = -3

Query: 1   PPPPSTFVNVMTVVSSTAMAMAGISEINGKHLQYSKFWNANSVPKHSSEETKLSSKYGML 60
           PPPPSTFVNVMTVVSST++AMAG+SEI GKHLQYSKFWNANS  K S++E+KLSSKYGML
Sbjct: 20  PPPPSTFVNVMTVVSSTSLAMAGLSEIKGKHLQYSKFWNANSGSKLSAQESKLSSKYGML 79

Query: 61  LAYTPAFLAGAASF 120
           L YTPAFLAGAASF
Sbjct: 80  LVYTPAFLAGAASF 93

Query: 121 180
           
Sbjct: 140 93

Query: 181 223
           
Sbjct: 200 93

BLAST of WMU45759 vs. NCBI nr
Match: gi|922352099|ref|XP_013451866.1| (3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Medicago truncatula])

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-17
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = -3

Query: 1   PPPPSTFVNVMTVVSSTAMAMAGISEINGKHLQYSKFWNANSVPKHSSEETKLSSKYGML 60
           PPP S FV  M+++S  A+A  GISEI GKHL YSKFWNAN+   +S ++ KLSSK GML
Sbjct: 12  PPPSSIFVTAMSIISFVALANYGISEIRGKHLNYSKFWNANNNKTNSVKQIKLSSKVGML 71

Query: 61  LAYTPAFLAGAASF 120
           L YTPAFLAGA SF
Sbjct: 72  LLYTPAFLAGAVSF 85

Query: 121 180
           
Sbjct: 132 85

Query: 181 223
           
Sbjct: 192 85

BLAST of WMU45759 vs. NCBI nr
Match: gi|922352101|ref|XP_013451867.1| (3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Medicago truncatula])

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-17
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = -3

Query: 1   PPPPSTFVNVMTVVSSTAMAMAGISEINGKHLQYSKFWNANSVPKHSSEETKLSSKYGML 60
           PPP S FV  M+++S  A+A  GISEI GKHL YSKFWNAN+   +S ++ KLSSK GML
Sbjct: 12  PPPSSIFVTAMSIISFVALANYGISEIRGKHLNYSKFWNANNNKTNSVKQIKLSSKVGML 71

Query: 61  LAYTPAFLAGAASF 120
           L YTPAFLAGA SF
Sbjct: 72  LLYTPAFLAGAVSF 85

Query: 121 180
           
Sbjct: 132 85

Query: 181 223
           
Sbjct: 192 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G16010.15.3e-1554.67 3-oxo-5-alpha-steroid 4-dehydrogenase family protein[more]
Match NameE-valueIdentityDescription
gi|778706250|ref|XP_004135052.2|1.5e-2786.49PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Cucumis sativus][more]
gi|700196982|gb|KGN52159.1|1.5e-2786.49hypothetical protein Csa_5G612880 [Cucumis sativus][more]
gi|659091769|ref|XP_008446722.1|1.7e-2685.14PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Cucumis melo][more]
gi|922352099|ref|XP_013451866.1|4.1e-1764.863-oxo-5-alpha-steroid 4-dehydrogenase family protein [Medicago truncatula][more]
gi|922352101|ref|XP_013451867.1|4.1e-1764.863-oxo-5-alpha-steroid 4-dehydrogenase family protein [Medicago truncatula][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla020466Cla020466gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0009010S2_0009010EST
S2_0024512S2_0024512EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR105563-OXO-5-ALPHA-STEROID 4-DEHYDROGENASEcoord: 3..56
score: 2.7
NoneNo IPR availablePANTHERPTHR10556:SF353-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE FAMILY PROTEINcoord: 3..56
score: 2.7