WMU42650 (transcribed_cluster) Watermelon (97103) v1

NameWMU42650
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 1511947 .. 1513543 (-)
Sequence length572
The following sequences are available for this feature:

transcribed_cluster sequence

GGGGAACATTCAAATTTCGAATTCCATTGCCCTCCCAAAATCCCAAGTTTTGCATTCGAGATTCGAATTTCGTTGCTCAGATCTTTCAATCCTACTTTCTGTAGAAACTGGCTGTGATTATAAACTCAAACATGTCTCCAGACAAACCCCGGTGAAGACGCCGGGGTTTCTGGATTTGAATCCGAAGAAACCGAGCCCGATTCTGAGCTTGAGGAGCTGGAGCTTGAAGTTAAGCAAATGGCACAGAGGATTCTTCACTACAGATCCACCCTGTCGGCACAACTCAAATCCTCGTTCTTTTCGTTACTTGAGTCCTCGAGGCCTCTAGCCGTTGGAGCCTCGGAGTCGGGAATATCTGCTCGTCCGGATCATGAAGACGATGAACAAACCACAAGAGGTGAAGACACAGTCCTTCATGAAGAGAGTTTAGAAACTGCAAAGAAGATACAATTGCTTAAAGATAAAATATCAAGTAATATCACTACGATCCCTACAGTCTTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAAAATTGGATTCTTATAATGGAGTCATTCATCCTGCAT
BLAST of WMU42650 vs. NCBI nr
Match: gi|449432158|ref|XP_004133867.1| (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 93/131 (70.99%), Postives = 98/131 (74.81%), Query Frame = 1

Query: 148 PGEDAGVSGFXXXXXXXXXXXXXXXXXVKQMAQRILHYRSTLSAQLKXXXXXXXXXXRPL 207
           PGEDAGVSGF                 V+QMAQRILHYRSTLSAQ+K          RPL
Sbjct: 6   PGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRPL 65

Query: 208 AVGASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIPTVLKR 267
           A+ ASE GISARPDHEDDEQTTRGEDT LHEE LETAKKIQL+KDKISSN T IPTVLKR
Sbjct: 66  AI-ASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKR 125

Query: 268 MKDCISTIDKI 327
           MKDCISTIDK+
Sbjct: 126 MKDCISTIDKL 135

Query: 328 387
           
Sbjct: 186 135

Query: 388 447
           
Sbjct: 246 135

Query: 448 507
           
Sbjct: 306 135

Query: 508 541
           
Sbjct: 366 135

BLAST of WMU42650 vs. NCBI nr
Match: gi|659075272|ref|XP_008438056.1| (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 2.4e-37
Identity = 90/131 (68.70%), Postives = 98/131 (74.81%), Query Frame = 1

Query: 148 PGEDAGVSGFXXXXXXXXXXXXXXXXXVKQMAQRILHYRSTLSAQLKXXXXXXXXXXRPL 207
           PGEDAGVSGF                 V+QMAQRILHYRST+ A++K          RPL
Sbjct: 6   PGEDAGVSGFESEETEPDSELEELELEVQQMAQRILHYRSTMWAEIKSSFCSLLESSRPL 65

Query: 208 AVGASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIPTVLKR 267
           A+ ASE GISARP HEDDEQTTRGEDT+LHEE LETAKKIQL+KDKISSNIT IPTVLKR
Sbjct: 66  AI-ASEPGISARPYHEDDEQTTRGEDTILHEEGLETAKKIQLMKDKISSNITMIPTVLKR 125

Query: 268 MKDCISTIDKI 327
           MKDCISTIDK+
Sbjct: 126 MKDCISTIDKL 135

Query: 328 387
           
Sbjct: 186 135

Query: 388 447
           
Sbjct: 246 135

Query: 448 507
           
Sbjct: 306 135

Query: 508 541
           
Sbjct: 366 135

BLAST of WMU42650 vs. NCBI nr
Match: gi|1009172616|ref|XP_015867369.1| (PREDICTED: uncharacterized protein LOC107404887 [Ziziphus jujuba])

HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1

Query: 229 VKQMAQRILHYRSTLSAQLKXXXXXXXXXXRPLAVGASESGISARPDHEDDEQTTRGEDT 288
           VK+MAQ+ILHYR+TL  QLK          RP+    S+   S  P      Q       
Sbjct: 40  VKEMAQKILHYRATLPNQLKDTLASVLAAQRPVLPHGSDPCPSGDPK---PGQVISNNGA 99

Query: 289 VLHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDCISTIDKI 348
           +L EE  ETAKKIQLLK KI+ N++ +P VLKRMK+CIS ID++
Sbjct: 100 LLAEEDQETAKKIQLLKAKIAHNVSVMPFVLKRMKECISKIDQL 140

Query: 349 408
           
Sbjct: 160 140

Query: 409 468
           
Sbjct: 220 140

Query: 469 528
           
Sbjct: 280 140

Query: 529 541
           
Sbjct: 340 140

BLAST of WMU42650 vs. NCBI nr
Match: gi|1009142331|ref|XP_015888666.1| (PREDICTED: uncharacterized protein LOC107423595, partial [Ziziphus jujuba])

HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1

Query: 229 VKQMAQRILHYRSTLSAQLKXXXXXXXXXXRPLAVGASESGISARPDHEDDEQTTRGEDT 288
           VK+MAQ+ILHYR+TL  QLK          RP+    S+   S  P      Q       
Sbjct: 40  VKEMAQKILHYRATLPDQLKDTLVSVLAAQRPVLPHGSDPCPSGDPK---PGQVISNNGA 99

Query: 289 VLHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDCISTIDKI 348
           +L EE  ETAKKIQLLK KI+ N++ +P VLKRMK+CIS ID++
Sbjct: 100 LLAEEDQETAKKIQLLKAKIAHNVSVMPFVLKRMKECISKIDQL 140

Query: 349 408
           
Sbjct: 160 140

Query: 409 468
           
Sbjct: 220 140

Query: 469 528
           
Sbjct: 280 140

Query: 529 541
           
Sbjct: 340 140

BLAST of WMU42650 vs. NCBI nr
Match: gi|743828764|ref|XP_011023349.1| (PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica])

HSP 1 Score: 79.3 bits (194), Expect = 7.8e-12
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 1

Query: 229 VKQMAQRILHYRSTLSAQLKXXXXXXXXXXRPLAV---GASESGISARPDHEDDEQTTRG 288
           VKQMA++IL YR+TL  QLK          RPL       S+ G S   + +   Q    
Sbjct: 39  VKQMAKKILEYRATLPDQLKTTLALLLSSQRPLLPDCDSGSDPGPSGELNPDSGGQDKSS 98

Query: 289 EDTVLHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDCISTIDKI 348
              +L +E  +TA+K+ LLK+KISSN++T+P VLKRMKDCIS I+K+
Sbjct: 99  RAALLTKEDRKTAEKVHLLKEKISSNVSTMPVVLKRMKDCISRINKL 145

Query: 349 408
           
Sbjct: 159 145

Query: 409 468
           
Sbjct: 219 145

Query: 469 528
           
Sbjct: 279 145

Query: 529 541
           
Sbjct: 339 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|449432158|ref|XP_004133867.1|2.9e-3870.99PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus][more]
gi|659075272|ref|XP_008438056.1|2.4e-3768.70PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo][more]
gi|1009172616|ref|XP_015867369.1|6.0e-1247.12PREDICTED: uncharacterized protein LOC107404887 [Ziziphus jujuba][more]
gi|1009142331|ref|XP_015888666.1|6.0e-1247.12PREDICTED: uncharacterized protein LOC107423595, partial [Ziziphus jujuba][more]
gi|743828764|ref|XP_011023349.1|7.8e-1244.86PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021241Cla021241gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0035013S1_0035013EST
S1_0038858S1_0038858EST
S1_0116323S1_0116323EST
S3_0083218S3_0083218EST
S3_0088384S3_0088384EST
S3_0113902S3_0113902EST
S3_0121774S3_0121774EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 26..46
scor
NoneNo IPR availablePANTHERPTHR36045FAMILY NOT NAMEDcoord: 16..136
score: 2.3