WMU41546 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU41546
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Elongation factor 4
Location	Chr4 : 13146197 .. 13168979 (-)
Sequence length	986

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGCAGACCAGTTCCCAGAGTTACGTGATGCTCTTGAAAAGCTACAACTTAATGATGCCGCGTTGAAGTTTGAGCCTGAAACATCAAATGCAATGGGTTTTGGCTTCAGATGTGGTTTCCTGGGTCTTCTCCACATGGAAATCGTCCAGGAAAGACTAGAAAGGGAATACAACCTGAGCCTGATAACAACCGCTCCAAGTGTTGTATATAGAGTTAACTGCGTAAACGGTGATACTGTTGAATGCTCAAATCCATCAATACTTCCTGAACCTGGAAAAAGGAAGTCAATTGAAGAGCCATTTGTCAAGATTGAGATGCTTACACCAAAAGAGTATATTGGACCCCTGATGGAATTAGCCCAGGAAAGAAGAGGAGAGTTTCAAGAAATGAAATTTATTACAGAAATTAGAGCATCAATCACCTACGCTCTGCCGCTAGCCGAAATGGTAGGTGATTTCTTTGACCAACTGAAATCCAGAAGCAAAGGTTATGCGAGCATGGAATATTCTTTTATTGGGTACAGAGAAAGTGAGTTGATAAAACTGGACATTCAGATAAATGGTGATCGAGTGGAACCATTGGCAACAATAGTGCACAGCAATAAGGCATATTCTGTTGGAAGAGCTTTGACTCAGAAGCTGAAGGAGCTGATACCACGACAAAATGTTTAAAGTACCTATTCAGGCATGTATTGGCTCTAAAAGTGATTGCTAGTGAAACTATATCAGCAATTAGAAAGGATGTCCTTGCCAAAATGCTACGGTGGAGACATAACAAGAAAGAAGAAATTGCTTAGGAAACAGGCTGAAGGAAAGAAGAGAATGAAAGCGATTGGGAGAGTGGATGTACCTCAAGAAGCTTTTATGGCTGTTTTGAAGCTTGAAAAGGAGGTTTTGTAGTTTTGGTCCTTGGGATCATTTTTTTCCCATTAACTTTTAACTATTGTATATATTTTTCTAAGTGACTTATATGACTTTATTTTCCCCT

Library


Library category	ESTs
watermelon fruit 10d library	2
watermelon fruit 18d library	2
watermelon fruit 26d library	2

Homology

[Close]

BLAST of WMU41546 vs. TAIR10
Match: AT5G08650.1 (AT5G08650.1 Small GTP-binding protein)

HSP 1 Score: 421.8 bits (1083), Expect = 3.9e-118
Identity = 223/298 (74.83%), Postives = 242/298 (81.21%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFP+LRDALEKLQLNDAALKFEPETS+AM            HMEIVQERLEREYNL+L
Sbjct: 385 ADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLNL 444

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVN VNGDT  CSNPS LP+PG+RKS+EEP+VKIE+LTPK+YIG LMELAQ
Sbjct: 445 ITTAPSVVYRVNSVNGDTTLCSNPSRLPDPGQRKSVEEPYVKIELLTPKDYIGALMELAQ 504

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEF+EMK+I E RASI Y LPLAEMVGDFFDQLKSR+KGYASMEYS IGYRES+LIK
Sbjct: 505 ERRGEFKEMKYIAENRASILYELPLAEMVGDFFDQLKSRTKGYASMEYSVIGYRESDLIK 564

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDI IN + VEPL+TIVH +KAYSVGRALTQKLKELIPRQ                    
Sbjct: 565 LDILINAEMVEPLSTIVHRDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEAL 624

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDI+RKKKLL+KQA GKKRMKAIGRVDVPQEAFMAVLKLE+EVL
Sbjct: 625 SAIRKDV-LAKCYGGDISRKKKLLKKQAAGKKRMKAIGRVDVPQEAFMAVLKLEREVL 681

Query: 302  361
           
Sbjct: 685  681

Query: 362  421
           
Sbjct: 745  681

Query: 422  481
           
Sbjct: 805  681

Query: 482  541
           
Sbjct: 865  681

Query: 542  601
           
Sbjct: 925  681

Query: 602  661
           
Sbjct: 985  681

Query: 662  721
           
Sbjct: 1045  681

Query: 722  781
           
Sbjct: 1105  681

Query: 782  841
           
Sbjct: 1165  681

Query: 842  896
           
Sbjct: 1225  681

[Close]

BLAST of WMU41546 vs. TAIR10
Match: AT5G39900.1 (AT5G39900.1 Small GTP-binding protein)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-58
Identity = 126/295 (42.71%), Postives = 165/295 (55.93%), Query Frame = 2


Query: 11  FPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSLITT 70
           F  L  A+EKL  NDA++    ETS A+            HM++  +RLE+EY   +I+T
Sbjct: 372 FEALGHAMEKLTCNDASVSVAKETSTALGMGFRCGFLGLLHMDVFHQRLEQEYGTQVIST 431

Query: 71  APSVVYRVNCVNGDTVECSNPSILPEPGKRKSIE--EPFVKIEMLTPKEYIGPLMELAQE 130
            P+V Y     +G  ++  NP+ LP   K +     EP V   ++ P EY+G ++ L  +
Sbjct: 432 IPTVPYTFEYSDGSKLQVQNPAALPSNPKYRVTASWEPTVIATIILPSEYVGAVINLCSD 491

Query: 131 RRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIKL 190
           RRG+  E  FI   R  + Y LPL E+V DF+D+LKS + GYAS +Y    Y+ S+L+KL
Sbjct: 492 RRGQQLEYTFIDAQRVFLKYQLPLREIVVDFYDELKSITSGYASFDYEDAEYQASDLVKL 551

Query: 191 DIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXXX 250
           DI +NG  V+ LATIVH  KAY VG+ L +KLK  I RQ     +  M            
Sbjct: 552 DILLNGQAVDALATIVHKQKAYRVGKELVEKLKNYIERQ----MFEVMIQAAIGSKIIAR 611

Query: 251 XXXERMS---LPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKL 310
                M    L KCYGGDITRKKKLL KQ EGKKRMK +G VD+P EAF  +LK+
Sbjct: 612 DTISAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSVDIPHEAFQQILKV 662

Query: 311  370
           
Sbjct: 672  662

Query: 371  430
           
Sbjct: 732  662

Query: 431  490
           
Sbjct: 792  662

Query: 491  550
           
Sbjct: 852  662

Query: 551  610
           
Sbjct: 912  662

Query: 611  670
           
Sbjct: 972  662

Query: 671  730
           
Sbjct: 1032  662

Query: 731  790
           
Sbjct: 1092  662

Query: 791  850
           
Sbjct: 1152  662

Query: 851  881
           
Sbjct: 1212  662

[Close]

BLAST of WMU41546 vs. Swiss-Prot
Match: GUFP_VITVI (Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera GN=VITISV_013255 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.7e-126
Identity = 235/298 (78.86%), Postives = 253/298 (84.90%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           AD+FP+LRDALEKLQLNDAALKFEPETS+AM            HMEI+QERLEREYNL+L
Sbjct: 384 ADKFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTL 443

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVNC+NGDTVECSNPS+LPEPGKR SIEEP+VKIEMLTPK+YIGPLMELAQ
Sbjct: 444 ITTAPSVVYRVNCINGDTVECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQ 503

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           +RRGEF+EMKFITE RASITY LPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ESELIK
Sbjct: 504 DRRGEFKEMKFITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIK 563

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQING+RVEPLATIVH +KAY+VGRALTQKLKELIPRQ                    
Sbjct: 564 LDIQINGERVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESL 623

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDITRKKKLL+KQAEGKKRMKAIG+VDVPQEAFMAVLKLEKEVL
Sbjct: 624 SAIRKDV-LSKCYGGDITRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680

Query: 302  361
           
Sbjct: 684  680

Query: 362  421
           
Sbjct: 744  680

Query: 422  481
           
Sbjct: 804  680

Query: 482  541
           
Sbjct: 864  680

Query: 542  601
           
Sbjct: 924  680

Query: 602  661
           
Sbjct: 984  680

Query: 662  721
           
Sbjct: 1044  680

Query: 722  781
           
Sbjct: 1104  680

Query: 782  841
           
Sbjct: 1164  680

Query: 842  896
           
Sbjct: 1224  680

[Close]

BLAST of WMU41546 vs. Swiss-Prot
Match: GUFP_RICCO (Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis GN=RCOM_1767360 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 8.5e-123
Identity = 230/296 (77.70%), Postives = 248/296 (83.78%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFPE+RDALEKLQLNDAALKFEPETS+AM            HMEIVQERLEREYNLSL
Sbjct: 387 ADQFPEVRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSL 446

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVNCV+GDTVECSNPS+LPEPGKR+SIEEP VKIEMLTPK+YIGPLMELAQ
Sbjct: 447 ITTAPSVVYRVNCVDGDTVECSNPSLLPEPGKRRSIEEPLVKIEMLTPKDYIGPLMELAQ 506

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           +RRGEF+EM+FIT  RASITY LPLAEMVGDFFDQLKSRSKGYASMEY+FIGY+ES+LIK
Sbjct: 507 DRRGEFKEMRFITNSRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYKESDLIK 566

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           L+IQINGD VEPLATIVH +KAY VGRALTQKLKELIPRQ                    
Sbjct: 567 LEIQINGDPVEPLATIVHKDKAYPVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEAL 626

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKE 301
               + + L KCYGGDI+RKKKLL+KQAEGKKRMKAIG+VDVPQEAFMAVLKLEK+
Sbjct: 627 PAIRKDV-LAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKK 681

Query: 302  361
           
Sbjct: 687  681

Query: 362  421
           
Sbjct: 747  681

Query: 422  481
           
Sbjct: 807  681

Query: 482  541
           
Sbjct: 867  681

Query: 542  601
           
Sbjct: 927  681

Query: 602  661
           
Sbjct: 987  681

Query: 662  721
           
Sbjct: 1047  681

Query: 722  781
           
Sbjct: 1107  681

Query: 782  841
           
Sbjct: 1167  681

Query: 842  890
           
Sbjct: 1227  681

[Close]

BLAST of WMU41546 vs. Swiss-Prot
Match: GUFP_POPTR (Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=2)

HSP 1 Score: 436.4 bits (1121), Expect = 2.7e-121
Identity = 229/298 (76.85%), Postives = 247/298 (82.89%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQF ELRDALEKLQLNDAALKFEPETSNAM            HMEIVQERLEREYNLSL
Sbjct: 382 ADQFSELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSL 441

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRV+CV+ D VECSNPS+LPEPGKR+S+EEPFVKIE+LTPK+YIG LMELAQ
Sbjct: 442 ITTAPSVVYRVHCVDDDIVECSNPSLLPEPGKRRSVEEPFVKIELLTPKDYIGTLMELAQ 501

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEF+EMK+ITE RASITY LPLAEMVGDFFDQLKSRSKGYASMEY+ +GY+ES+LI+
Sbjct: 502 ERRGEFKEMKYITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTVVGYKESDLIR 561

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQINGD VEPLATIVH +KAYSVGRALTQKLKELIPRQ                    
Sbjct: 562 LDIQINGDPVEPLATIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESL 621

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDI+RKKKLL+KQA GKKRMKAIG+VDVPQEAFMAVLKLEKEVL
Sbjct: 622 SAIRKDV-LAKCYGGDISRKKKLLKKQAAGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 678

Query: 302  361
           
Sbjct: 682  678

Query: 362  421
           
Sbjct: 742  678

Query: 422  481
           
Sbjct: 802  678

Query: 482  541
           
Sbjct: 862  678

Query: 542  601
           
Sbjct: 922  678

Query: 602  661
           
Sbjct: 982  678

Query: 662  721
           
Sbjct: 1042  678

Query: 722  781
           
Sbjct: 1102  678

Query: 782  841
           
Sbjct: 1162  678

Query: 842  896
           
Sbjct: 1222  678

[Close]

BLAST of WMU41546 vs. Swiss-Prot
Match: GUFP_ARATH (Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana GN=At5g08650 PE=2 SV=2)

HSP 1 Score: 421.8 bits (1083), Expect = 7.0e-117
Identity = 223/298 (74.83%), Postives = 242/298 (81.21%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFP+LRDALEKLQLNDAALKFEPETS+AM            HMEIVQERLEREYNL+L
Sbjct: 385 ADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLNL 444

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVN VNGDT  CSNPS LP+PG+RKS+EEP+VKIE+LTPK+YIG LMELAQ
Sbjct: 445 ITTAPSVVYRVNSVNGDTTLCSNPSRLPDPGQRKSVEEPYVKIELLTPKDYIGALMELAQ 504

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEF+EMK+I E RASI Y LPLAEMVGDFFDQLKSR+KGYASMEYS IGYRES+LIK
Sbjct: 505 ERRGEFKEMKYIAENRASILYELPLAEMVGDFFDQLKSRTKGYASMEYSVIGYRESDLIK 564

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDI IN + VEPL+TIVH +KAYSVGRALTQKLKELIPRQ                    
Sbjct: 565 LDILINAEMVEPLSTIVHRDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEAL 624

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDI+RKKKLL+KQA GKKRMKAIGRVDVPQEAFMAVLKLE+EVL
Sbjct: 625 SAIRKDV-LAKCYGGDISRKKKLLKKQAAGKKRMKAIGRVDVPQEAFMAVLKLEREVL 681

Query: 302  361
           
Sbjct: 685  681

Query: 362  421
           
Sbjct: 745  681

Query: 422  481
           
Sbjct: 805  681

Query: 482  541
           
Sbjct: 865  681

Query: 542  601
           
Sbjct: 925  681

Query: 602  661
           
Sbjct: 985  681

Query: 662  721
           
Sbjct: 1045  681

Query: 722  781
           
Sbjct: 1105  681

Query: 782  841
           
Sbjct: 1165  681

Query: 842  896
           
Sbjct: 1225  681

[Close]

BLAST of WMU41546 vs. Swiss-Prot
Match: GUFP_ORYSJ (Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0157700 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 5.9e-116
Identity = 224/306 (73.20%), Postives = 242/306 (79.08%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALK--------FEPETSNAMXXXXXXXXXXXXHMEIVQERL 61
           ADQF ELR+ALEKLQLNDAALK        FEPE+S+AM            HMEIVQERL
Sbjct: 376 ADQFEELREALEKLQLNDAALKAVTRFSMQFEPESSSAMGFGFRCGFLGLLHMEIVQERL 435

Query: 62  EREYNLSLITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYI 121
           EREYNL+LI TAPSVVY VN  +G+TVECSNPS+LPEPGKR+SIEEP+VKI+MLTPKEYI
Sbjct: 436 EREYNLNLIITAPSVVYHVNLADGETVECSNPSLLPEPGKRRSIEEPYVKIDMLTPKEYI 495

Query: 122 GPLMELAQERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIG 181
           GP+MEL QERRGEF+EM FITE RAS+ Y LPLAEMVGDFFDQLKSRSKGYASMEYS IG
Sbjct: 496 GPIMELGQERRGEFKEMNFITENRASVVYELPLAEMVGDFFDQLKSRSKGYASMEYSLIG 555

Query: 182 YRESELIKLDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWX 241
           YRES L+KLDIQINGD VE L+TIVH +KAYSVGRALTQKLKELIPRQ            
Sbjct: 556 YRESNLVKLDIQINGDPVEALSTIVHRDKAYSVGRALTQKLKELIPRQMFRVPIQACIGA 615

Query: 242 XXXXXXXXXXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLK 301
                       + + L KCYGGDI+RKKKLL+KQAEGKKRMKAIGRVDVPQEAFMAVLK
Sbjct: 616 KVIASEALSAIRKDV-LSKCYGGDISRKKKLLKKQAEGKKRMKAIGRVDVPQEAFMAVLK 675

Query: 302 LEKEVL 361
           LEKEVL
Sbjct: 676 LEKEVL 680

Query: 362  421
           
Sbjct: 736  680

Query: 422  481
           
Sbjct: 796  680

Query: 482  541
           
Sbjct: 856  680

Query: 542  601
           
Sbjct: 916  680

Query: 602  661
           
Sbjct: 976  680

Query: 662  721
           
Sbjct: 1036  680

Query: 722  781
           
Sbjct: 1096  680

Query: 782  841
           
Sbjct: 1156  680

Query: 842  896
           
Sbjct: 1216  680

[Close]

BLAST of WMU41546 vs. NCBI nr
Match: gi|659069361|ref|XP_008449438.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 7.7e-132
Identity = 252/298 (84.56%), Postives = 259/298 (86.91%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFPELRDALEKLQLNDAALKFEPETSNAM            HMEIVQERLEREYNLSL
Sbjct: 386 ADQFPELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSL 445

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVNCVNGDTVECSNPS+LPEPGKR+SIEEPFVKIEMLTPKEYIGPLMELAQ
Sbjct: 446 ITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQ 505

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEFQEMKFITE+RASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK
Sbjct: 506 ERRGEFQEMKFITEVRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 565

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQINGDRVEPL+TIVH+NKAYSVGRALTQKLKELIPRQ                    
Sbjct: 566 LDIQINGDRVEPLSTIVHNNKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASETI 625

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Sbjct: 626 SAIRKDV-LAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 682

Query: 302  361
           
Sbjct: 686  682

Query: 362  421
           
Sbjct: 746  682

Query: 422  481
           
Sbjct: 806  682

Query: 482  541
           
Sbjct: 866  682

Query: 542  601
           
Sbjct: 926  682

Query: 602  661
           
Sbjct: 986  682

Query: 662  721
           
Sbjct: 1046  682

Query: 722  781
           
Sbjct: 1106  682

Query: 782  841
           
Sbjct: 1166  682

Query: 842  896
           
Sbjct: 1226  682

[Close]

BLAST of WMU41546 vs. NCBI nr
Match: gi|659069359|ref|XP_008449429.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 7.7e-132
Identity = 252/298 (84.56%), Postives = 259/298 (86.91%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFPELRDALEKLQLNDAALKFEPETSNAM            HMEIVQERLEREYNLSL
Sbjct: 393 ADQFPELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSL 452

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVNCVNGDTVECSNPS+LPEPGKR+SIEEPFVKIEMLTPKEYIGPLMELAQ
Sbjct: 453 ITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQ 512

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEFQEMKFITE+RASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK
Sbjct: 513 ERRGEFQEMKFITEVRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 572

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQINGDRVEPL+TIVH+NKAYSVGRALTQKLKELIPRQ                    
Sbjct: 573 LDIQINGDRVEPLSTIVHNNKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASETI 632

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Sbjct: 633 SAIRKDV-LAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 689

Query: 302  361
           
Sbjct: 693  689

Query: 362  421
           
Sbjct: 753  689

Query: 422  481
           
Sbjct: 813  689

Query: 482  541
           
Sbjct: 873  689

Query: 542  601
           
Sbjct: 933  689

Query: 602  661
           
Sbjct: 993  689

Query: 662  721
           
Sbjct: 1053  689

Query: 722  781
           
Sbjct: 1113  689

Query: 782  841
           
Sbjct: 1173  689

Query: 842  896
           
Sbjct: 1233  689

[Close]

BLAST of WMU41546 vs. NCBI nr
Match: gi|778694762|ref|XP_011653860.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 1.1e-130
Identity = 250/298 (83.89%), Postives = 258/298 (86.58%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFPELRDALEKLQLNDAALKFEPETS+AM            HMEIVQERLEREYNLSL
Sbjct: 386 ADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSL 445

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVNCVNGDTVECSNPS+LPEPGKR+SIEEPFVKIEMLTPKEYIGPLMELAQ
Sbjct: 446 ITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQ 505

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEFQEMKFITE+RASITYALPLAEMVGDFFDQLKSRSKGYASMEYSF GYRESELIK
Sbjct: 506 ERRGEFQEMKFITEVRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFTGYRESELIK 565

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQINGDRVEPL+TIVH+NKAYSVGRALTQKLKELIPRQ                    
Sbjct: 566 LDIQINGDRVEPLSTIVHNNKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKIIASETI 625

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Sbjct: 626 SAIRKDV-LAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 682

Query: 302  361
           
Sbjct: 686  682

Query: 362  421
           
Sbjct: 746  682

Query: 422  481
           
Sbjct: 806  682

Query: 482  541
           
Sbjct: 866  682

Query: 542  601
           
Sbjct: 926  682

Query: 602  661
           
Sbjct: 986  682

Query: 662  721
           
Sbjct: 1046  682

Query: 722  781
           
Sbjct: 1106  682

Query: 782  841
           
Sbjct: 1166  682

Query: 842  896
           
Sbjct: 1226  682

[Close]

BLAST of WMU41546 vs. NCBI nr
Match: gi|700199572|gb|KGN54730.1| (hypothetical protein Csa_4G437010 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 1.1e-130
Identity = 250/298 (83.89%), Postives = 258/298 (86.58%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFPELRDALEKLQLNDAALKFEPETS+AM            HMEIVQERLEREYNLSL
Sbjct: 79  ADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSL 138

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRVNCVNGDTVECSNPS+LPEPGKR+SIEEPFVKIEMLTPKEYIGPLMELAQ
Sbjct: 139 ITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQ 198

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           ERRGEFQEMKFITE+RASITYALPLAEMVGDFFDQLKSRSKGYASMEYSF GYRESELIK
Sbjct: 199 ERRGEFQEMKFITEVRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFTGYRESELIK 258

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQINGDRVEPL+TIVH+NKAYSVGRALTQKLKELIPRQ                    
Sbjct: 259 LDIQINGDRVEPLSTIVHNNKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKIIASETI 318

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Sbjct: 319 SAIRKDV-LAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 375

Query: 302  361
           
Sbjct: 379  375

Query: 362  421
           
Sbjct: 439  375

Query: 422  481
           
Sbjct: 499  375

Query: 482  541
           
Sbjct: 559  375

Query: 542  601
           
Sbjct: 619  375

Query: 602  661
           
Sbjct: 679  375

Query: 662  721
           
Sbjct: 739  375

Query: 722  781
           
Sbjct: 799  375

Query: 782  841
           
Sbjct: 859  375

Query: 842  896
           
Sbjct: 919  375

[Close]

BLAST of WMU41546 vs. NCBI nr
Match: gi|720041750|ref|XP_010269009.1| (PREDICTED: translation factor GUF1 homolog, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 454.5 bits (1168), Expect = 1.5e-124
Identity = 237/298 (79.53%), Postives = 255/298 (85.57%), Query Frame = 2


Query: 2   ADQFPELRDALEKLQLNDAALKFEPETSNAMXXXXXXXXXXXXHMEIVQERLEREYNLSL 61
           ADQFPELRDALEKLQLNDAALKFEPETS+AM            HMEIVQERLEREYNL+L
Sbjct: 390 ADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLTL 449

Query: 62  ITTAPSVVYRVNCVNGDTVECSNPSILPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQ 121
           ITTAPSVVYRV+CVNGDTVECSNPS+LPEPGKR+SIEEPFVKIEMLTPK+YIGPLMELAQ
Sbjct: 450 ITTAPSVVYRVDCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKDYIGPLMELAQ 509

Query: 122 ERRGEFQEMKFITEIRASITYALPLAEMVGDFFDQLKSRSKGYASMEYSFIGYRESELIK 181
           +RRGEF+EMK+ITE RASITY LPL+EMVGDFFDQLKSRSKGYASMEYSF+GYRESELIK
Sbjct: 510 DRRGEFKEMKYITENRASITYELPLSEMVGDFFDQLKSRSKGYASMEYSFVGYRESELIK 569

Query: 182 LDIQINGDRVEPLATIVHSNKAYSVGRALTQKLKELIPRQNV*STYSGMYWXXXXXXXXX 241
           LDIQINGD VEPLATIVH +KAY+VGRALTQKLKELIPRQ                    
Sbjct: 570 LDIQINGDPVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGSKVIASETL 629

Query: 242 XXXXERMSLPKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 301
               + + L KCYGGDITRKKKLLRKQ+EGKKRMKAIG+VDVPQEAFMAVL+LEKEVL
Sbjct: 630 SAIRKDV-LAKCYGGDITRKKKLLRKQSEGKKRMKAIGKVDVPQEAFMAVLRLEKEVL 686

Query: 302  361
           
Sbjct: 690  686

Query: 362  421
           
Sbjct: 750  686

Query: 422  481
           
Sbjct: 810  686

Query: 482  541
           
Sbjct: 870  686

Query: 542  601
           
Sbjct: 930  686

Query: 602  661
           
Sbjct: 990  686

Query: 662  721
           
Sbjct: 1050  686

Query: 722  781
           
Sbjct: 1110  686

Query: 782  841
           
Sbjct: 1170  686

Query: 842  896
           
Sbjct: 1230  686

The following BLAST results are available for this feature:

BLAST of WMU41546 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08650.1	3.9e-118	74.83	Small GTP-binding protein	[more]
AT5G39900.1	3.5e-58	42.71	Small GTP-binding protein	[more]

BLAST of WMU41546 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GUFP_VITVI	1.7e-126	78.86	Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera GN=VITISV_01325...	[more]
GUFP_RICCO	8.5e-123	77.70	Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis GN=RCOM_17673...	[more]
GUFP_POPTR	2.7e-121	76.85	Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDR...	[more]
GUFP_ARATH	7.0e-117	74.83	Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana GN=At5g08...	[more]
GUFP_ORYSJ	5.9e-116	73.20	Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica G...	[more]

BLAST of WMU41546 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069361\|ref\|XP_008449438.1\|	7.7e-132	84.56	PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis me...	[more]
gi\|659069359\|ref\|XP_008449429.1\|	7.7e-132	84.56	PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis me...	[more]
gi\|778694762\|ref\|XP_011653860.1\|	1.1e-130	83.89	PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis sativus]	[more]
gi\|700199572\|gb\|KGN54730.1\|	1.1e-130	83.89	hypothetical protein Csa_4G437010 [Cucumis sativus]	[more]
gi\|720041750\|ref\|XP_010269009.1\|	1.5e-124	79.53	PREDICTED: translation factor GUF1 homolog, chloroplastic [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000640	EFG_V-like
IPR009022	EFG_III
IPR013842	LepA_CTD

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla006097	Cla006097	gene
Cla006099	Cla006099	gene
Cla006098	Cla006098	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0080039	S1_0080039	EST
S1_0141016	S1_0141016	EST
S2_0066161	S2_0066161	EST
S2_0079151	S2_0079151	EST
S3_0005898	S3_0005898	EST
S3_0009595	S3_0009595	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000640	Translation elongation factor EFG, V domain	GENE3D	G3DSA:3.30.70.240		coord: 99..188 score: 2.9
IPR000640	Translation elongation factor EFG, V domain	PFAM	PF00679	EFG_C	coord: 97..182 score: 1.8
IPR000640	Translation elongation factor EFG, V domain	SMART	SM00838	EFG_C_a	coord: 96..184 score: 0.
IPR009022	Elongation factor G, III-V domain	unknown	SSF54980	EF-G C-terminal domain-like	coord: 4..68 score: 3.35E-15coord: 97..192 score: 3.21
IPR013842	GTP-binding protein LepA, C-terminal	PFAM	PF06421	LepA_C	coord: 186..222 score: 3.
None	No IPR available	GENE3D	G3DSA:3.30.70.870		coord: 3..67 score: 1.4
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 95..221 score: 1.2E-128coord: 2..71 score: 1.2E
None	No IPR available	PANTHER	PTHR23115:SF189	TRANSLATION FACTOR GUF1 HOMOLOG, CHLOROPLASTIC	coord: 2..71 score: 1.2E-128coord: 95..221 score: 1.2E