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The following sequences are available for this feature:
transcribed_cluster sequence GTATCCATCTTTAGGTCAAAATCTGAGGAGTTTCTGTAAACCTTCTGAAATGGGAGCATTTCAAGTCATTTGGATGGAAGCTCTCCTCCAGCTTTCCAAGATCCTCAAAGATCAAACAAGATGTTTTTTGGGACATCTCTCTTTCATCTTGCTTTTGTAAAGCTTCAAATTTTGGGGCAGTTTTGGGCAGATTCAGAGATGGGGTTTTGTTGGATTTGAGCAGTGGAAGAGGAGGAGTGAGTTGATGAGGTCTGGTGGAGAAGGAAGGCCTGAGGATAGAAGGGAAGGGGAAACAAAATGGTTTGAGGAAGAAGAAGGAAAATGGGGAGATTATGAGAGTTTTTGTGGTATAATCAATTTTGGAGATGGGGAAAAGGCCAATTGAAGTTCTGAAATACAGTATCTGAGATCTGCAAAGATCATATGGTTTAA
BLAST of WMU40824 vs. NCBI nr
Match: gi|449443410|ref|XP_004139470.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 4.5e-28 Identity = 76/127 (59.84%), Postives = 83/127 (65.35%), Query Frame = -3 Query: 41 LCRSQILYFRTSIGLFPISKIDYTTKTLIIXXXXXXXXXXXXXXXXXILRPSFSTRPHQL 100 LCRSQ LYFRTSIGLFPISKIDYTTKTLII +L + PH + Sbjct: 59 LCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPS---LLSSGLPSPPHLI 118
Query: 101 TPPLPLLKSNKT-PSLNLPKTAPKFEALQKQDEREMSQKTSCLIFEDLGKLEESFHPNDL 160 L SN T P + PKFEALQ QDE + SQK+SCLIFEDLGKL+ESFHPNDL Sbjct: 119 NSLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDL 178
Query: 161 KCSHFRR 220 KCSHFRR Sbjct: 179 KCSHFRR 182
Query: 221 280 Sbjct: 239 182
Query: 281 340 Sbjct: 299 182
Query: 341 400 Sbjct: 359 182
Query: 401 419 Sbjct: 419 182
BLAST of WMU40824 vs. NCBI nr
Match: gi|449443412|ref|XP_004139471.1| (PREDICTED: uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 4.5e-28 Identity = 76/127 (59.84%), Postives = 83/127 (65.35%), Query Frame = -3 Query: 41 LCRSQILYFRTSIGLFPISKIDYTTKTLIIXXXXXXXXXXXXXXXXXILRPSFSTRPHQL 100 LCRSQ LYFRTSIGLFPISKIDYTTKTLII +L + PH + Sbjct: 59 LCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPS---LLSSGLPSPPHLI 118
Query: 101 TPPLPLLKSNKT-PSLNLPKTAPKFEALQKQDEREMSQKTSCLIFEDLGKLEESFHPNDL 160 L SN T P + PKFEALQ QDE + SQK+SCLIFEDLGKL+ESFHPNDL Sbjct: 119 NSLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDL 178
Query: 161 KCSHFRR 220 KCSHFRR Sbjct: 179 KCSHFRR 182
Query: 221 280 Sbjct: 239 182
Query: 281 340 Sbjct: 299 182
Query: 341 400 Sbjct: 359 182
Query: 401 419 Sbjct: 419 182
BLAST of WMU40824 vs. NCBI nr
Match: gi|659071772|ref|XP_008461870.1| (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 4.2e-26 Identity = 73/127 (57.48%), Postives = 80/127 (62.99%), Query Frame = -3 Query: 41 LCRSQILYFRTSIGLFPISKIDYTTKTLIIXXXXXXXXXXXXXXXXXILRPSFSTRPHQL 100 LCRSQ LYFRTSIG+FPISKIDYTTKTLII +L + PH + Sbjct: 59 LCRSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSHHFVSPS---LLSSGLPSPPHLI 118
Query: 101 TPPLPLLKSNKT-PSLNLPKTAPKFEALQKQDEREMSQKTSCLIFEDLGKLEESFHPNDL 160 L SN T P PK ALQ QDE ++SQK SCLIFEDLGKL+ESFHPNDL Sbjct: 119 NSLLLFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDL 178
Query: 161 KCSHFRR 220 KCSHFRR Sbjct: 179 KCSHFRR 182
Query: 221 280 Sbjct: 239 182
Query: 281 340 Sbjct: 299 182
Query: 341 400 Sbjct: 359 182
Query: 401 419 Sbjct: 419 182
BLAST of WMU40824 vs. NCBI nr
Match: gi|802622132|ref|XP_012076209.1| (PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]) HSP 1 Score: 79.3 bits (194), Expect = 5.9e-12 Identity = 55/145 (37.93%), Postives = 70/145 (48.28%), Query Frame = -3 Query: 44 LCRSQILYFRTSIGLFPISKIDYTTKTLIIXXXXXXXXXXXXXXXXXILRPSFSTRPHQL 103 LCRS LYFRTS+GLFP+S ++YTTKTL I PS S+ H + Sbjct: 60 LCRSHKLYFRTSLGLFPVSSVNYTTKTLTIS------------------HPSRSSSQHFI 119
Query: 104 TPPLPLLKSNKTP------------SLNLPKTA--------PKFEALQKQDEREMSQKTS 163 +P L LL TP S N P T+ F A + E+E+ S Sbjct: 120 SPAL-LLAGFPTPLTPNSLLLFNCSSKNHPGTSFIGNCSRLKAFAASSQNQEQELEVPYS 179
Query: 164 CLIFEDLGKLEESFHPNDLKCSHFR 223 CL+ D+ KL+ FHP DL CSH+R Sbjct: 180 CLLVNDIEKLDGGFHPKDLNCSHYR 185
Query: 224 283 Sbjct: 240 185
Query: 284 343 Sbjct: 300 185
Query: 344 403 Sbjct: 360 185
Query: 404 419 Sbjct: 420 185
BLAST of WMU40824 vs. NCBI nr
Match: gi|590587297|ref|XP_007015931.1| (Uncharacterized protein TCM_041497 [Theobroma cacao]) HSP 1 Score: 77.4 bits (189), Expect = 2.2e-11 Identity = 49/128 (38.28%), Postives = 66/128 (51.56%), Query Frame = -3 Query: 41 CRSQILYFRTSIGLFPISKIDYTTKTLIIXXXXXXXXXXXXXXXXXILRPSFSTRPHQLT 100 C+SQ LYFRTSIGLFPIS IDYT+KTL + +L F + PH + Sbjct: 59 CKSQKLYFRTSIGLFPISSIDYTSKTLTV--SHPSCSSSQQYVSPALLSAGFPSPPHPNS 118
Query: 101 PPLPLLKSNKTPSLNLPKTAPKFE---ALQKQDEREMSQKTSCLIFEDLGKLEESFHPND 160 L + P +L + + A + E E+ SCL+ +D+ KL+ FHPND Sbjct: 119 LLLFNCSHKRHPKSSLIRNCTRLHICGAAFEVQEPEIKVPYSCLLVQDVEKLDTDFHPND 178
Query: 161 LKCSHFRR 220 L CS +RR Sbjct: 179 LSCSDYRR 184
Query: 221 280 Sbjct: 239 184
Query: 281 340 Sbjct: 299 184
Query: 341 400 Sbjct: 359 184
Query: 401 416 Sbjct: 419 184
The following BLAST results are available for this feature:
This transcribed_cluster is associated with the following gene feature(s):
Feature Name | Unique Name | Type |
Cla003533 | Cla003533 | gene |
The following EST feature(s) are a part of this transcribed_cluster:
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