WMU39109 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU39109
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	40S ribosomal protein S8
Location	Chr7 : 30378601 .. 30381000 (-)
Sequence length	990

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGGGACTTGTATCCTTCTTCGTTAAAAGGGGCTAGGGTTTTTCCCTCATTCTCTCGACCGCCTCTTTCGCTCGATTCTCGGCTTGGCAGGAATTTTAGACCTTCTCCGCCCGCAAGAGCCCTCCCCTCTCCAAGATGGGTATTTCACGTGACTCTATGCACAAGAGACGTGCGACAGGAGGAAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTATGAACTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCAATCAGGAGGATCAGAGTCCGTGGTGGTAATGTTAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGCAGTGAGGCTGTGACCAGAAAGACCCGTATTCTTGATGTGGTGTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAGAGTGCCATCGTTCAGGTTGATGCAGCACCATTCAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCATCTGCCAAGAAGGAAGAGGAAGGTGATGCTCCCAGTGAGGAGGTGAAGAAGAGTAACCATGTCCAACGCAAGCTGGAGAAACGTCAGCAGGATCGTAAACTTGACCCTCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCGGGTCAATGTGGCCGAGCAGATGGATACATCTTGGAGGGTAAAGAGCTTGAGTTCTATATGAAGAAACTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAAATTGTCACCAAGATGTTTTCTCCGTGCGTTTACCATTTCATTGCCCTTTTCTTCTTATGAATACGATTAGTTATTGCAGCTGAGATTAAAGAGTAATTTAGGAACTTCAGTTTTGATGGTGTTAGCTTGTTCAATTACAATACTTCAGTTCTTTTCAAGTTTTTCTTGAACTTTTGATCTTACAAATCGTTTAACC

Library


Library category	ESTs
watermelon fruit 10d library	9
watermelon fruit 18d library	5
watermelon fruit 26d library	13
watermelon fruit 34d library	4

Homology

[Close]

BLAST of WMU39109 vs. TAIR10
Match: AT5G59240.1 (AT5G59240.1 Ribosomal protein S8e family protein)

HSP 1 Score: 308.5 bits (789), Expect = 4.9e-84
Identity = 160/211 (75.83%), Postives = 170/211 (80.57%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDS+H                 YELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDA-PSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMA 314
           DIGR             G+A  +EEVKKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+A
Sbjct: 121 DIGR----------KKKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 315 CISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           CI+SRPGQCGRADGYILEGKELEFYMKKLQ+
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQK 201

Query: 375  434
           
Sbjct: 241  201

Query: 435  494
           
Sbjct: 301  201

Query: 495  554
           
Sbjct: 361  201

Query: 555  614
           
Sbjct: 421  201

Query: 615  674
           
Sbjct: 481  201

Query: 675  734
           
Sbjct: 541  201

Query: 735  765
           
Sbjct: 601  201

[Close]

BLAST of WMU39109 vs. TAIR10
Match: AT5G20290.1 (AT5G20290.1 Ribosomal protein S8e family protein)

HSP 1 Score: 298.5 bits (763), Expect = 5.0e-81
Identity = 150/215 (69.77%), Postives = 165/215 (76.74%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDS+H                 YE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 255 DIGR-----XXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 314
           ++GR                    A  EEVKKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 315 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQK 215

Query: 375  434
           
Sbjct: 241  215

Query: 435  494
           
Sbjct: 301  215

Query: 495  554
           
Sbjct: 361  215

Query: 555  614
           
Sbjct: 421  215

Query: 615  674
           
Sbjct: 481  215

Query: 675  734
           
Sbjct: 541  215

Query: 735  765
           
Sbjct: 601  215

[Close]

BLAST of WMU39109 vs. Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2)

HSP 1 Score: 320.5 bits (820), Expect = 2.2e-86
Identity = 163/213 (76.53%), Postives = 170/213 (79.81%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXG---DAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 314
           DIGR             G   +A +EE KKSNHV RKLEKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 315 MACISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQR 213

Query: 375  434
           
Sbjct: 241  213

Query: 435  494
           
Sbjct: 301  213

Query: 495  554
           
Sbjct: 361  213

Query: 555  614
           
Sbjct: 421  213

Query: 615  674
           
Sbjct: 481  213

Query: 675  734
           
Sbjct: 541  213

Query: 735  765
           
Sbjct: 601  213

[Close]

BLAST of WMU39109 vs. Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2)

HSP 1 Score: 318.5 bits (815), Expect = 8.3e-86
Identity = 164/212 (77.36%), Postives = 168/212 (79.25%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGD--APSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 314
           DIGR              D  A +EE KKSNHV RKLEKRQQ R LD HIEEQF SGRL+
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 315 ACISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ACISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQR 212

Query: 375  434
           
Sbjct: 241  212

Query: 435  494
           
Sbjct: 301  212

Query: 495  554
           
Sbjct: 361  212

Query: 555  614
           
Sbjct: 421  212

Query: 615  674
           
Sbjct: 481  212

Query: 675  734
           
Sbjct: 541  212

Query: 735  765
           
Sbjct: 601  212

[Close]

BLAST of WMU39109 vs. Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.6e-83
Identity = 158/211 (74.88%), Postives = 167/211 (79.15%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGR-XXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMA 314
           +IGR              G+A +EE KKSNHV  KLEKRQQ R LD HIEEQF  G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 315 CISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           CISSRPGQCG+ADG ILEGKELEFYMKKLQR
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQR 211

Query: 375  434
           
Sbjct: 241  211

Query: 435  494
           
Sbjct: 301  211

Query: 495  554
           
Sbjct: 361  211

Query: 555  614
           
Sbjct: 421  211

Query: 615  674
           
Sbjct: 481  211

Query: 675  734
           
Sbjct: 541  211

Query: 735  765
           
Sbjct: 601  211

[Close]

BLAST of WMU39109 vs. Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 8.6e-83
Identity = 160/211 (75.83%), Postives = 170/211 (80.57%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDS+H                 YELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDA-PSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMA 314
           DIGR             G+A  +EEVKKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+A
Sbjct: 121 DIGR----------KKKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 315 CISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           CI+SRPGQCGRADGYILEGKELEFYMKKLQ+
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQK 201

Query: 375  434
           
Sbjct: 241  201

Query: 435  494
           
Sbjct: 301  201

Query: 495  554
           
Sbjct: 361  201

Query: 555  614
           
Sbjct: 421  201

Query: 615  674
           
Sbjct: 481  201

Query: 675  734
           
Sbjct: 541  201

Query: 735  765
           
Sbjct: 601  201

[Close]

BLAST of WMU39109 vs. Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 8.9e-80
Identity = 150/215 (69.77%), Postives = 165/215 (76.74%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDS+H                 YE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 255 DIGR-----XXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 314
           ++GR                    A  EEVKKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 315 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQK 215

Query: 375  434
           
Sbjct: 241  215

Query: 435  494
           
Sbjct: 301  215

Query: 495  554
           
Sbjct: 361  215

Query: 555  614
           
Sbjct: 421  215

Query: 615  674
           
Sbjct: 481  215

Query: 675  734
           
Sbjct: 541  215

Query: 735  765
           
Sbjct: 601  215

[Close]

BLAST of WMU39109 vs. TrEMBL
Match: A0A0A0LJA0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 176/210 (83.81%), Postives = 179/210 (85.24%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             GDA +EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQR 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

[Close]

BLAST of WMU39109 vs. TrEMBL
Match: A0A0A0KFT0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 6.6e-90
Identity = 174/213 (81.69%), Postives = 178/213 (83.57%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGD---APSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 314
           DIGR             GD   A +EEVKKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 315 MACISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           MACISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQR 213

Query: 375  434
           
Sbjct: 241  213

Query: 435  494
           
Sbjct: 301  213

Query: 495  554
           
Sbjct: 361  213

Query: 555  614
           
Sbjct: 421  213

Query: 615  674
           
Sbjct: 481  213

Query: 675  734
           
Sbjct: 541  213

Query: 735  765
           
Sbjct: 601  213

[Close]

BLAST of WMU39109 vs. TrEMBL
Match: A0A067KSQ5_JATCU (40S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.2e-88
Identity = 167/210 (79.52%), Postives = 174/210 (82.86%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             G+  +EEVKKSNHV RKLEKRQQ RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKVAATKKEGEEGEGATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ISSRPGQCGRADGYILEGKELEFYMKK+QR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKIQR 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

[Close]

BLAST of WMU39109 vs. TrEMBL
Match: B9SSR3_RICCO (40S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.1e-87
Identity = 166/210 (79.05%), Postives = 174/210 (82.86%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPA+TKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             G+A +EEVKKSNHV RKLEKRQQ RKLDPHIEEQF  GRL+AC
Sbjct: 121 DIGRKKKTAAAKKEGEEGEAATEEVKKSNHVLRKLEKRQQIRKLDPHIEEQFGGGRLLAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQR 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

[Close]

BLAST of WMU39109 vs. TrEMBL
Match: A0A0D2VFW2_GOSRA (40S ribosomal protein S8 OS=Gossypium raimondii GN=B456_013G156600 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.1e-87
Identity = 164/210 (78.10%), Postives = 174/210 (82.86%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGI 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             G+  +EEVKKSNH+ RKLEKRQQ+R LDPHIEEQF SGRL+AC
Sbjct: 121 DIGRKKKSAAAKKEGEEGETATEEVKKSNHILRKLEKRQQNRALDPHIEEQFGSGRLLAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ISSRPGQCGRADGYILEGKELEFYMKK+QR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKIQR 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

[Close]

BLAST of WMU39109 vs. NCBI nr
Match: gi|659069757|ref|XP_008451649.1| (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 2.7e-92
Identity = 177/210 (84.29%), Postives = 179/210 (85.24%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             GDA +EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQR 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

[Close]

BLAST of WMU39109 vs. NCBI nr
Match: gi|449461203|ref|XP_004148331.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 4.6e-92
Identity = 176/210 (83.81%), Postives = 179/210 (85.24%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             GDA +EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           ISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQR 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

[Close]

BLAST of WMU39109 vs. NCBI nr
Match: gi|659133447|ref|XP_008466734.1| (PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 4.3e-90
Identity = 176/211 (83.41%), Postives = 178/211 (84.36%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGD-APSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMA 314
           DIGR             GD A +EEVKKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLMA
Sbjct: 121 DIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180

Query: 315 CISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           CISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQR 211

Query: 375  434
           
Sbjct: 241  211

Query: 435  494
           
Sbjct: 301  211

Query: 495  554
           
Sbjct: 361  211

Query: 555  614
           
Sbjct: 421  211

Query: 615  674
           
Sbjct: 481  211

Query: 675  734
           
Sbjct: 541  211

Query: 735  765
           
Sbjct: 601  211

[Close]

BLAST of WMU39109 vs. NCBI nr
Match: gi|449464166|ref|XP_004149800.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 2.8e-89
Identity = 174/213 (81.69%), Postives = 178/213 (83.57%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGD---APSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 314
           DIGR             GD   A +EEVKKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 315 MACISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           MACISSRPGQCGRADGYILEGKELEFYMKKLQR
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQR 213

Query: 375  434
           
Sbjct: 241  213

Query: 435  494
           
Sbjct: 301  213

Query: 495  554
           
Sbjct: 361  213

Query: 555  614
           
Sbjct: 421  213

Query: 615  674
           
Sbjct: 481  213

Query: 675  734
           
Sbjct: 541  213

Query: 735  765
           
Sbjct: 601  213

[Close]

BLAST of WMU39109 vs. NCBI nr
Match: gi|1021570392|ref|XP_016176378.1| (PREDICTED: 40S ribosomal protein S8-like [Arachis ipaensis])

HSP 1 Score: 331.6 bits (849), Expect = 1.5e-87
Identity = 164/210 (78.10%), Postives = 175/210 (83.33%), Query Frame = 3


Query: 135 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 194
           MGISRDSMH                 YELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 195 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 254
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 255 DIGRXXXXXXXXXXXXXGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 314
           DIGR             G+ P+EE KKSNHVQRK+EKRQ+DRKLDPHIEEQF  GRL+AC
Sbjct: 121 DIGRKKKTAAAKKDAEEGETPTEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLAC 180

Query: 315 ISSRPGQCGRADGYILEGKELEFYMKKLQR 374
           I+SRPGQCGRADGYILEGKELEFYMKK+Q+
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKIQK 210

Query: 375  434
           
Sbjct: 241  210

Query: 435  494
           
Sbjct: 301  210

Query: 495  554
           
Sbjct: 361  210

Query: 555  614
           
Sbjct: 421  210

Query: 615  674
           
Sbjct: 481  210

Query: 675  734
           
Sbjct: 541  210

Query: 735  765
           
Sbjct: 601  210

The following BLAST results are available for this feature:

BLAST of WMU39109 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59240.1	4.9e-84	75.83	Ribosomal protein S8e family protein	[more]
AT5G20290.1	5.0e-81	69.77	Ribosomal protein S8e family protein	[more]

BLAST of WMU39109 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS8_MAIZE	2.2e-86	76.53	40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2	[more]
RS8_ORYSJ	8.3e-86	77.36	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2	[more]
RS8_PRUAR	6.6e-83	74.88	40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1	[more]
RS82_ARATH	8.6e-83	75.83	40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1	[more]
RS81_ARATH	8.9e-80	69.77	40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1	[more]

BLAST of WMU39109 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA0_CUCSA	1.1e-92	83.81	40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1	[more]
A0A0A0KFT0_CUCSA	6.6e-90	81.69	40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1	[more]
A0A067KSQ5_JATCU	6.2e-88	79.52	40S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1	[more]
B9SSR3_RICCO	3.1e-87	79.05	40S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1	[more]
A0A0D2VFW2_GOSRA	3.1e-87	78.10	40S ribosomal protein S8 OS=Gossypium raimondii GN=B456_013G156600 PE=3 SV=1	[more]

BLAST of WMU39109 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069757\|ref\|XP_008451649.1\|	2.7e-92	84.29	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo]	[more]
gi\|449461203\|ref\|XP_004148331.1\|	4.6e-92	83.81	PREDICTED: 40S ribosomal protein S8 [Cucumis sativus]	[more]
gi\|659133447\|ref\|XP_008466734.1\|	4.3e-90	83.41	PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo]	[more]
gi\|449464166\|ref\|XP_004149800.1\|	2.8e-89	81.69	PREDICTED: 40S ribosomal protein S8 [Cucumis sativus]	[more]
gi\|1021570392\|ref\|XP_016176378.1\|	1.5e-87	78.10	PREDICTED: 40S ribosomal protein S8-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001047	Ribosomal_S8e
IPR018283	Ribosomal_S8e_CS
IPR022309	Ribosomal_S8e/biogenesis_NSA2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla010848	Cla010848	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0026921	S1_0026921	EST
S1_0031816	S1_0031816	EST
S1_0087514	S1_0087514	EST
S1_0119488	S1_0119488	EST
S1_0120341	S1_0120341	EST
S1_0129136	S1_0129136	EST
S1_0140823	S1_0140823	EST
S1_0148176	S1_0148176	EST
S1_0151183	S1_0151183	EST
S2_0015923	S2_0015923	EST
S2_0026221	S2_0026221	EST
S2_0064818	S2_0064818	EST
S2_0115282	S2_0115282	EST
S2_0156221	S2_0156221	EST
S3_0001590	S3_0001590	EST
S3_0024096	S3_0024096	EST
S3_0056574	S3_0056574	EST
S3_0067216	S3_0067216	EST
S3_0083141	S3_0083141	EST
S3_0085606	S3_0085606	EST
S3_0092607	S3_0092607	EST
S3_0104055	S3_0104055	EST
S3_0108461	S3_0108461	EST
S3_0117929	S3_0117929	EST
S3_0118050	S3_0118050	EST
S3_0145413	S3_0145413	EST
S3_0158664	S3_0158664	EST
S4_0020762	S4_0020762	EST
S4_0052554	S4_0052554	EST
S4_0088019	S4_0088019	EST
S4_0156301	S4_0156301	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 2..214 score: 1.0E
IPR001047	Ribosomal protein S8e	TIGRFAMs	TIGR00307	TIGR00307	coord: 1..198 score: 1.4
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30 scor
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..196 score: 1.8