WMU37187 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU37187
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Signal transducer, putative
Location	Chr5 : 2720371 .. 2722996 (-)
Sequence length	703

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACAAAATCAATTCTAAAATCCGAGAGAACTAGAGATCAAATCAATTGGAGACGAGGGAATGTGAATTTGATTCAAACAGCGATGGAAGTCAACAATTCTCCGAGAAATTCAAATCTTCTCAACACACTCAAACCCTTGATCATTTTAGGGTTCATCTTCTCCTTGCTATCCACCCATACAGTTCTCGCCAAATCTCGCCGTCCAGTCACTGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCCGACATCGAGAGTGGATTGTGGGGTTGGCAATGCAGATCTTCAAACTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTATAAGTACTGTATATATAAGTTATCAATGGGGGAGAGTCGTGGAGGGTATTAAGGCTCCTTTGACTACTGATGTTTGTCTGCTTTCTCGAGATTGTCTGTTATTTTAACTGTCTGGTGTTCCGTTATGCCCTGTTCTTCTGACATTTTGGGGTCAAAATTTGAGGTACAAAATCCAATCCCGAGTTCCTATTTTTCGTCCTTTCTCTCTCTTATTTTTATTTTTTAAATTCAAGAGAAATATGATAACAGCAACAACGAAAACCTTGGAATGGAAATCACAGCTACTTATGAACG

Library


Library category	ESTs
watermelon fruit 10d library	3
watermelon fruit 18d library	2
watermelon fruit 26d library	1

Homology

[Close]

BLAST of WMU37187 vs. TAIR10
Match: AT5G17610.1 (AT5G17610.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 34/47 (72.34%), Postives = 36/47 (76.60%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSF 389
           SP CY L+Y SDPLEEGEKDL RSQEYKYC+YK S+GES  G  G F
Sbjct: 75  SPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121

Query: 390  449
           
Sbjct: 135  121

Query: 450  471
           
Sbjct: 195  121

HSP 2 Score: 66.6 bits (161), Expect = 2.3e-11
Identity = 28/41 (68.29%), Postives = 30/41 (73.17%), Query Frame = 1


Query: 181 VLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSNYRK 240
           V +KS RP++D E RQKK ECY DIESGLWGWQC+SS   K
Sbjct: 26  VFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCKSSAIAK 66

Query: 241  300
           
Sbjct: 86   66

Query: 301  304
           
Sbjct: 146  66

[Close]

BLAST of WMU37187 vs. TrEMBL
Match: A0A0A0L9A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129480 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.5e-23
Identity = 57/74 (77.03%), Postives = 57/74 (77.03%), Query Frame = 1


Query: 82  MEVNNSPRNSNLLNTLKPXXXXXXXXXXXXTHTVLAKSRRPVTDAETRQKKQECYADIES 141
           MEVNNS RNS LLNTLKP            THTVLAKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60

Query: 142 GLWGWQCRSSNYRK 201
           GLWGWQCRSS   K
Sbjct: 61  GLWGWQCRSSTTEK 74

Query: 202  261
           
Sbjct: 121  74

Query: 262  304
           
Sbjct: 181  74

[Close]

BLAST of WMU37187 vs. TrEMBL
Match: A0A0A0L9A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129480 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.9e-17
Identity = 45/49 (91.84%), Postives = 45/49 (91.84%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFDY 389
           SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGES  G  GSFDY
Sbjct: 83  SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSFDY 131

Query: 390  449
           
Sbjct: 143  131

Query: 450  477
           
Sbjct: 203  131

HSP 2 Score: 80.9 bits (198), Expect = 2.3e-12
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFDY 389
           SP CY+LVY SDPLEEGEKD  RSQEYKYC+++LS+GES  G  GSFDY
Sbjct: 82  SPPCYELVYESDPLEEGEKDFTRSQEYKYCMHRLSLGESLDGVKGSFDY 130

Query: 390  449
           
Sbjct: 142  130

Query: 450  477
           
Sbjct: 202  130

[Close]

BLAST of WMU37187 vs. TrEMBL
Match: D7U635_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0107g00240 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-09
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 1


Query: 181 VLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSS 240
           VL+KSRRP++D+E R+KK ECYADIESGLWGWQC+SS
Sbjct: 33  VLSKSRRPISDSEIREKKNECYADIESGLWGWQCKSS 69

Query: 241  292
           
Sbjct: 93   69

HSP 2 Score: 80.9 bits (198), Expect = 2.3e-12
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFDY 389
           SPTCY+ VY SDPLEEGEKD  RSQE+KYC++KLS+GES  G  GSFDY
Sbjct: 78  SPTCYEFVYESDPLEEGEKDFVRSQEFKYCMHKLSLGESLEGIRGSFDY 126

Query: 390  449
           
Sbjct: 138  126

Query: 450  477
           
Sbjct: 198  126

[Close]

BLAST of WMU37187 vs. TrEMBL
Match: V4TLA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033075mg PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.9e-08
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1


Query: 181 VLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSNYRK 240
           VLAKSRRP++D E RQKK +CYAD+ESGLWG QC+SS   K
Sbjct: 29  VLAKSRRPISDIEVRQKKMDCYADVESGLWGPQCKSSMIAK 69

Query: 241  300
           
Sbjct: 89   69

Query: 301  304
           
Sbjct: 149  69

HSP 2 Score: 80.5 bits (197), Expect = 3.0e-12
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFDY 389
           SP CY+L+Y SDPLEEGEKD  RSQE+KYC+YKLS+GES  G  G+FDY
Sbjct: 77  SPACYELIYESDPLEEGEKDFIRSQEFKYCMYKLSLGESLEGVKGTFDY 125

Query: 390  449
           
Sbjct: 137  125

Query: 450  477
           
Sbjct: 197  125

[Close]

BLAST of WMU37187 vs. TrEMBL
Match: A0A061F0A2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_025702 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 1


Query: 178 TVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSNYRK 237
           TVLAKSR P+TD+ET++KK ECYADIESGLWG QC+SS+  K
Sbjct: 27  TVLAKSRNPITDSETKKKKSECYADIESGLWGEQCKSSSIAK 68

Query: 238  297
           
Sbjct: 87   68

Query: 298  304
           
Sbjct: 147  68

HSP 2 Score: 80.1 bits (196), Expect = 3.9e-12
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSF 389
           SP CY+L+Y SDPLEEGEKDL RSQEYKYC+YKLS+GES  G  GSF
Sbjct: 75  SPVCYELIYESDPLEEGEKDLIRSQEYKYCMYKLSLGESLDGVRGSF 121

Query: 390  449
           
Sbjct: 135  121

Query: 450  471
           
Sbjct: 195  121

[Close]

BLAST of WMU37187 vs. NCBI nr
Match: gi|449432364|ref|XP_004133969.1| (PREDICTED: uncharacterized protein LOC101207062 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 57/74 (77.03%), Postives = 57/74 (77.03%), Query Frame = 1


Query: 82  MEVNNSPRNSNLLNTLKPXXXXXXXXXXXXTHTVLAKSRRPVTDAETRQKKQECYADIES 141
           MEVNNS RNS LLNTLKP            THTVLAKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60

Query: 142 GLWGWQCRSSNYRK 201
           GLWGWQCRSS   K
Sbjct: 61  GLWGWQCRSSTTEK 74

Query: 202  261
           
Sbjct: 121  74

Query: 262  304
           
Sbjct: 181  74

[Close]

BLAST of WMU37187 vs. NCBI nr
Match: gi|659075702|ref|XP_008438284.1| (PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 6.0e-22
Identity = 55/74 (74.32%), Postives = 57/74 (77.03%), Query Frame = 1


Query: 82  MEVNNSPRNSNLLNTLKPXXXXXXXXXXXXTHTVLAKSRRPVTDAETRQKKQECYADIES 141
           MEVNNS +NS LLNTLKP            THTV+AKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSKNSKLLNTLKPLILLGFIFSLLTTHTVIAKSRRPVTDAETRQKKQECYADIES 60

Query: 142 GLWGWQCRSSNYRK 201
           GLWGWQCRSS   K
Sbjct: 61  GLWGWQCRSSTTEK 74

Query: 202  261
           
Sbjct: 121  74

Query: 262  304
           
Sbjct: 181  74

[Close]

BLAST of WMU37187 vs. NCBI nr
Match: gi|729423422|ref|XP_010558685.1| (PREDICTED: uncharacterized protein LOC104827245 [Tarenaya hassleriana])

HSP 1 Score: 84.3 bits (207), Expect = 3.0e-13
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFD 389
           SP CY+L+Y SDPLEEGEKDL RSQEYKYC+YKLS+GES  G  GSFD
Sbjct: 111 SPPCYELIYESDPLEEGEKDLIRSQEYKYCMYKLSLGESIDGVRGSFD 158

Query: 390  449
           
Sbjct: 171  158

Query: 450  474
           
Sbjct: 231  158

[Close]

BLAST of WMU37187 vs. NCBI nr
Match: gi|225463830|ref|XP_002264489.1| (PREDICTED: uncharacterized protein LOC100248442 [Vitis vinifera])

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFDY 389
           SP CY+LVY SDPLEEGEKD  RSQEYKYC+++LS+GES  G  GSFDY
Sbjct: 82  SPPCYELVYESDPLEEGEKDFTRSQEYKYCMHRLSLGESLDGVKGSFDY 130

Query: 390  449
           
Sbjct: 142  130

Query: 450  477
           
Sbjct: 202  130

[Close]

BLAST of WMU37187 vs. NCBI nr
Match: gi|567889691|ref|XP_006437366.1| (hypothetical protein CICLE_v10033075mg [Citrus clementina])

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 3


Query: 330 SPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESRGGY*GSFDY 389
           SPTCY+ VY SDPLEEGEKD  RSQE+KYC++KLS+GES  G  GSFDY
Sbjct: 78  SPTCYEFVYESDPLEEGEKDFVRSQEFKYCMHKLSLGESLEGIRGSFDY 126

Query: 390  449
           
Sbjct: 138  126

Query: 450  477
           
Sbjct: 198  126

The following BLAST results are available for this feature:

BLAST of WMU37187 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17610.1	1.1e-13	72.34	unknown protein	[more]

BLAST of WMU37187 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A0_CUCSA	6.5e-23	77.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129480 PE=4 SV=1	[more]
A0A0A0L9A0_CUCSA	6.9e-17	91.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129480 PE=4 SV=1	[more]
D7U635_VITVI	1.8e-09	78.38	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0107g00240 PE=4 SV=...	[more]
V4TLA5_9ROSI	5.9e-08	70.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033075mg PE=4 SV=1	[more]
A0A061F0A2_THECC	2.4e-09	73.81	Uncharacterized protein OS=Theobroma cacao GN=TCM_025702 PE=4 SV=1	[more]

BLAST of WMU37187 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432364\|ref\|XP_004133969.1\|	1.6e-22	77.03	PREDICTED: uncharacterized protein LOC101207062 [Cucumis sativus]	[more]
gi\|659075702\|ref\|XP_008438284.1\|	6.0e-22	74.32	PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo]	[more]
gi\|729423422\|ref\|XP_010558685.1\|	3.0e-13	77.08	PREDICTED: uncharacterized protein LOC104827245 [Tarenaya hassleriana]	[more]
gi\|225463830\|ref\|XP_002264489.1\|	6.7e-13	73.47	PREDICTED: uncharacterized protein LOC100248442 [Vitis vinifera]	[more]
gi\|567889691\|ref\|XP_006437366.1\|	6.7e-13	73.47	hypothetical protein CICLE_v10033075mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla021384	Cla021384	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0079540	S1_0079540	EST
S1_0084881	S1_0084881	EST
S1_0149739	S1_0149739	EST
S2_0004146	S2_0004146	EST
S2_0134607	S2_0134607	EST
S3_0143497	S3_0143497	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35455	FAMILY NOT NAMED	coord: 1..126 score: 4.2