WMU37149 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU37149
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	50S ribosomal protein L22
Location	Chr1 : 14200267 .. 14206455 (+)
Sequence length	1340

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TTGCTCCCCCTAGAATTCTCTCCCTCTCTCGGCCGATCTCCCTCCCTCAACCTCACCGTGTACCGCCGCCCCGCGCCGTCGACCTCTCAGTTTCCCTCGCCGCCGGGCCCTCAGCCACCCCCACTCTTCGCCACCCGCCTCAGCCTCCCTCTAATTCGTTCTGATTTGAAATATTTCCACTCAAGGTTCCAAGCGGAGGGACTTCATTTCTCTGGTGAATTTTTATTCGAGCTAGGAATTTCGTGGTCATGGTTGGTTGGCAGAGATGTATACGGTCCATACTTGGCCATGTGCAAAAGAGAGTGGAATTGAGTTACAATGTAGCTGCCAACTCTAGTTATCGTTTGCAATCCTCTTTTTCAAATGGGGAATTGCTTTATTTACAGCAACTTTTGAAGCCATCCTCAGAGGGCATTGCACAACCTCATTTTCGGTGTCTCCAACAGATGGGAATTTCCAGTTCAAGGATGTTATTAGCTAATAAATCTGAGGAAGCAGTCTCATCTCCCCTGACCTCTGCTTTGGCTTTAAGCAGTGGAAAAGATGGAGATAAAAAAGACCAAAAAGTAGTCTGTAAACCTTCCAAAGTCCAAGCTATATTAAAGGGAATCAAACAGAGTCCCAAAAAAAGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTCTATCAGGTCATCCACTCAGCCAAAGCAACGCAACCCACAACCATGGAATGGATTCTGATCGGCTCCTTGTTGCTGAGGCATTTTGGTGGGGTAAGGGATTCTTTAAGGAAAAGATTATCATACCATGCTAAAGGAAAATGCGGAATCGAAGTTAGACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAGAGATAGCAAAGCTTAAAGTTAGCAATTTCCGCAAGCTTACCAAGCGTGAAAACCGACTTGTACCTCATAAACTTATTGAAACCACATCTATCTGGAACCGGAAGGGCAAAGCTAAAGTGAATGAAGAATGTTGAAAGGCTTCGAAGTATGATAATAACTGCTTCCAGTTGCGTTTCCTCATCTCTTTCTGCCAATGCATTGTTTACTTTCATGTCCTTTTGTTCTAGACAAGTTAGGCAGGAAAAGGGATTTTAATGTGGTAGAATACACTCAGTAAGGGATAAAAATGTTATTTTATGTACATTTTGATTCATTTTACCTGGCTTGTTTTTTAAAAGTAATTCCCTTGATCTCTTTTCTTTGTTCCATTTCAATTATGAGATCTCCAAGAAGGATTCATACGACC

Library


Library category	ESTs
watermelon fruit 10d library	4
watermelon fruit 18d library	5
watermelon fruit 26d library	3
watermelon fruit 34d library	1
Watermelon normalization and subtraction library	1

Homology

[Close]

BLAST of WMU37149 vs. TAIR10
Match: AT1G52370.1 (AT1G52370.1 Ribosomal protein L22p/L17e family protein)

HSP 1 Score: 166.8 bits (421), Expect = 3.1e-41
Identity = 89/140 (63.57%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+A             L+  
Sbjct: 117  PKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDRLLVAE 176

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +    K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+LKV NF+KL KR
Sbjct: 177  AFVG-KGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKKLNKR 236

Query: 742  ENRLVPHKLIETTSIWNRKG 801
            + +LVPHKLIET+ IWNR+G
Sbjct: 237  QRQLVPHKLIETSPIWNRRG 255

Query: 802   861
            
Sbjct: 297   255

Query: 862   921
            
Sbjct: 357   255

Query: 922   981
            
Sbjct: 417   255

Query: 982   1041
            
Sbjct: 477   255

HSP 2 Score: 97.1 bits (240), Expect = 3.0e-20
Identity = 72/199 (36.18%), Postives = 101/199 (50.75%), Query Frame = 3


Query: 249 MVGWQRCIRSILGHVQKRVELSYNVAAN--SSYRLQSSFSNGELLYLQQLLKPSSEGIAQ 308
           M GWQ+ ++ ++  V KRV+ S+   AN  S+  L+S FS G   YLQ LL+ +    ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLRSTYS--SR 60

Query: 309 PHFRCLQQMGISSSRMLLANKSEEXXXXXXXXXXXXXXXXXXXXXXQKVVCKPSKVQAIL 368
           P +  LQQ+GIS+SR L A +                         QK++ K  KVQA+L
Sbjct: 61  PLYYHLQQLGISTSRQLQAGEEP-----VSSPLSSPALLGSGKEEEQKIIPKRQKVQAVL 120

Query: 369 KGIKQSPKKSQLGCCFSSRHAR*RCTDAVTINCEASFKNCLSGHPLSQSNATHNHGMDSD 428
           K IKQSPKK  L                + +  + + +        +++NATHNHG+D D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPD 180

Query: 429 RLLVAEAFWWGKGFFKEKI 488
           RLLVAEAF  GKG F +K+
Sbjct: 181 RLLVAEAF-VGKGLFGKKV 188

Query: 489  548
           
Sbjct: 241  188

Query: 549  608
           
Sbjct: 301  188

Query: 609  668
           
Sbjct: 361  188

Query: 669  728
           
Sbjct: 421  188

Query: 729  788
           
Sbjct: 481  188

Query: 789  840
           
Sbjct: 541  188

[Close]

BLAST of WMU37149 vs. TAIR10
Match: AT4G28360.1 (AT4G28360.1 Ribosomal protein L22p/L17e family protein)

HSP 1 Score: 166.4 bits (420), Expect = 4.0e-41
Identity = 88/140 (62.86%), Postives = 107/140 (76.43%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRA++TVY+VIH+A+A             L+  
Sbjct: 118  PKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPDRLLVAE 177

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +    K+++YHAKG+ GI   P CRLTV++RETTPEEEAEIA+LKV NF+K +KR
Sbjct: 178  AFVG-KGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFKKKSKR 237

Query: 742  ENRLVPHKLIETTSIWNRKG 801
            E +LVPHKLIET+ IWNR+G
Sbjct: 238  ERQLVPHKLIETSPIWNRRG 256

Query: 802   861
            
Sbjct: 298   256

Query: 862   921
            
Sbjct: 358   256

Query: 922   981
            
Sbjct: 418   256

Query: 982   1041
            
Sbjct: 478   256

HSP 2 Score: 104.0 bits (258), Expect = 2.5e-22
Identity = 77/200 (38.50%), Postives = 106/200 (53.00%), Query Frame = 3


Query: 249 MVGWQRCIRSILGHVQKRVELSYNVAAN---SSYRLQSSFSNGELLYLQQLLKPSSEGIA 308
           MVGW+R +++++  V +RV+ S+   AN   S+  L+S FS G   YLQ LL+PS    +
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQG---YLQSLLRPSYS--S 60

Query: 309 QPHFRCLQQMGISSSRMLLANKSEEXXXXXXXXXXXXXXXXXXXXXXQKVVCKPSKVQAI 368
           +P +  LQQ+GIS+SR L A  SEE                      QK++ K  KVQA+
Sbjct: 61  RPLYHHLQQLGISTSRQLQA--SEEPVSSPLSSPALLGSGKEEE---QKIIPKRQKVQAV 120

Query: 369 LKGIKQSPKKSQLGCCFSSRHAR*RCTDAVTINCEASFKNCLSGHPLSQSNATHNHGMDS 428
           LK IKQSPKK  L                + +  + + +        +++NATHNHG+D 
Sbjct: 121 LKSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDP 180

Query: 429 DRLLVAEAFWWGKGFFKEKI 488
           DRLLVAEAF  GKG F +K+
Sbjct: 181 DRLLVAEAF-VGKGLFGKKV 189

Query: 489  548
           
Sbjct: 241  189

Query: 549  608
           
Sbjct: 301  189

Query: 609  668
           
Sbjct: 361  189

Query: 669  728
           
Sbjct: 421  189

Query: 729  788
           
Sbjct: 481  189

Query: 789  840
           
Sbjct: 541  189

[Close]

BLAST of WMU37149 vs. Swiss-Prot
Match: RL22_SINMW (50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) GN=rplV PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-06
Identity = 34/104 (32.69%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 622 PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
           P+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA A      +  +   ++  
Sbjct: 26  PQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVRKTLESAIANAENNHDLDVDSLIVAE 85

Query: 682 HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEA 741
            F G +  + KR     +G+     +P   LT+V+RE   + EA
Sbjct: 86  AFVG-KSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

Query: 742  801
           
Sbjct: 146  128

Query: 802  861
           
Sbjct: 206  128

Query: 862  921
           
Sbjct: 266  128

Query: 922  934
           
Sbjct: 326  128

[Close]

BLAST of WMU37149 vs. Swiss-Prot
Match: RL22_RHIME (50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) GN=rplV PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-06
Identity = 34/104 (32.69%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 622 PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
           P+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA A      +  +   ++  
Sbjct: 26  PQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANAENNHDLDVDSLIVAE 85

Query: 682 HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEA 741
            F G +  + KR     +G+     +P   LT+V+RE   + EA
Sbjct: 86  AFVG-KSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

Query: 742  801
           
Sbjct: 146  128

Query: 802  861
           
Sbjct: 206  128

Query: 862  921
           
Sbjct: 266  128

Query: 922  934
           
Sbjct: 326  128

[Close]

BLAST of WMU37149 vs. Swiss-Prot
Match: RL22_MARMM (50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) GN=rplV PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 1


Query: 622 PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
           P+K+NLVAAL+RG +VE AL  L+ + KR SK V + + SA A        + I SL++ 
Sbjct: 26  PQKLNLVAALIRGKKVERALADLEFSRKRISKEVKKTLESAIANAENN-HGLDIDSLVVS 85

Query: 682 HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRE 741
                ++ + KR    A+G+    ++P   LT+V+RE
Sbjct: 86  EAFVGKNLVMKRFRARARGRGAKILKPFSELTIVVRE 121

Query: 742  801
           
Sbjct: 146  121

Query: 802  861
           
Sbjct: 206  121

Query: 862  913
           
Sbjct: 266  121

[Close]

BLAST of WMU37149 vs. Swiss-Prot
Match: RL22_METSB (50S ribosomal protein L22 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplV PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.3e-06
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 622 PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
           P+K+NL+A L+RG +VE AL +L+ + KRA+  V + + SA A         +   ++  
Sbjct: 26  PQKLNLLAQLIRGKKVERALAELEFSRKRAAFDVRKTLESAIANAENNHSLEVDDLVVAE 85

Query: 682 HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEA 741
            F G +  + KR S  A+G+ G   +P   LT+VLRE     +A
Sbjct: 86  AFVG-KALVMKRFSPRARGRSGKIQKPFSHLTIVLREVAVAAQA 128

Query: 742  801
           
Sbjct: 146  128

Query: 802  861
           
Sbjct: 206  128

Query: 862  921
           
Sbjct: 266  128

Query: 922  934
           
Sbjct: 326  128

[Close]

BLAST of WMU37149 vs. Swiss-Prot
Match: RL22_RHILO (50S ribosomal protein L22 OS=Rhizobium loti (strain MAFF303099) GN=rplV PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-06
Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = 1


Query: 622 PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
           P+K+NLVAAL+RG +V  AL  L+ + KR S TV + + SA A      +  +   ++  
Sbjct: 26  PQKLNLVAALIRGKKVATALSDLEFSAKRISGTVKKTLESAIANAENNHDLDVDALVVAE 85

Query: 682 HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEA 741
            + G +  + KR     +G+     +P   LT+V+RE   + EA
Sbjct: 86  AYVG-KSIVMKRFHARGRGRASRIEKPFSHLTIVVREVEEKGEA 128

Query: 742  801
           
Sbjct: 146  128

Query: 802  861
           
Sbjct: 206  128

Query: 862  921
           
Sbjct: 266  128

Query: 922  934
           
Sbjct: 326  128

[Close]

BLAST of WMU37149 vs. TrEMBL
Match: A0A0A0LVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153000 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 116/148 (78.38%), Postives = 124/148 (83.78%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKA             L+  
Sbjct: 125  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRLLVAE 184

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   RKRLSYHAKG+CG+EV+PECRLTVVLRETTPEEEA+IAKLKVSNFRKLTKR
Sbjct: 185  AFVG-KGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKLTKR 244

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNEEC 801
            E++LVPHKLIETT IWNRKGKAK N EC
Sbjct: 245  EHQLVPHKLIETTPIWNRKGKAKANTEC 271

Query: 802   861
            
Sbjct: 305   271

Query: 862   921
            
Sbjct: 365   271

Query: 922   981
            
Sbjct: 425   271

Query: 982   1041
            
Sbjct: 485   271

Query: 1042  1066
            
Sbjct: 545   271

[Close]

BLAST of WMU37149 vs. TrEMBL
Match: A0A0A0LVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153000 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.5e-48
Identity = 111/197 (56.35%), Postives = 132/197 (67.01%), Query Frame = 3


Query: 249 MVGWQRCIRSILGHVQKRVELSYNVAANSSYRLQSSFSNGELLYLQQLLKPSSEGIAQPH 308
           MVGWQRC+RS+LGH+Q +VELSYN A+NSSYRLQSS SNGEL YLQ+LLKPSS  IAQP 
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60

Query: 309 FRCLQQMGISSSRMLLANKSEEXXXXXXXXXXXXXXXXXXXXXXQKVVCKPSKVQAILKG 368
           FRCLQQMGISSSRMLLA+K EE                      QKV+CK S+VQA+LKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120

Query: 369 IKQSPKKSQLGCCFSSRHAR*RCTDAVTINCEASFKNCLSGHPLSQSNATHNHGMDSDRL 428
           IKQSPKK  L                + +  + + K        +++NATHNHGMDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180

Query: 429 LVAEAFWWGKGFFKEKI 488
           LVAEAF  GKG F++++
Sbjct: 181 LVAEAF-VGKGLFRKRL 196

Query: 489  548
           
Sbjct: 241  196

Query: 549  608
           
Sbjct: 301  196

Query: 609  668
           
Sbjct: 361  196

Query: 669  728
           
Sbjct: 421  196

Query: 729  788
           
Sbjct: 481  196

Query: 789  840
           
Sbjct: 541  196

HSP 2 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 107/146 (73.29%), Postives = 118/146 (80.82%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+A             L+  
Sbjct: 125  PKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLVAE 184

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   +KRLSYHAKGKCG++VRPECRLTVV+RE TP+EEAEIAKLKV NF KLTKR
Sbjct: 185  AFVG-KGYFKKRLSYHAKGKCGVKVRPECRLTVVVREITPDEEAEIAKLKVKNFVKLTKR 244

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNE 801
            E RLVPHKLIETT IWNRKGKA+  E
Sbjct: 245  ERRLVPHKLIETTPIWNRKGKARERE 269

Query: 802   861
            
Sbjct: 305   269

Query: 862   921
            
Sbjct: 365   269

Query: 922   981
            
Sbjct: 425   269

Query: 982   1041
            
Sbjct: 485   269

Query: 1042  1060
            
Sbjct: 545   269

[Close]

BLAST of WMU37149 vs. TrEMBL
Match: M5VRJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009843mg PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 89/203 (43.84%), Postives = 112/203 (55.17%), Query Frame = 3


Query: 249 MVGWQRCIRSILGHVQKRVELSYNVAANSSYRLQSSFSN---GELLYLQQLLKPSSEGIA 308
           MVGWQR ++S +  + KRVE SYN +AN S    SS S+   G L Y Q L KPSS  I+
Sbjct: 1   MVGWQRHLQSAIRQIGKRVECSYNPSANFSSSSSSSSSSRLEGVLPYFQTLCKPSSPTIS 60

Query: 309 QPHFRCLQQMGISSSRMLLANKSEEXXXXXXXXXXXXXXXXXXXXXXQKVVCKPSKVQAI 368
           +P  +  Q +GISSSR LLA   EE                      QK + KP KVQAI
Sbjct: 61  RPFHQYFQHLGISSSRTLLA---EETPSPSPLTPLLTSNTGKDEEHKQKSLTKPDKVQAI 120

Query: 369 LKGIKQSPKKSQLGCCFSSRHAR*RCTDA---VTINCEASFKNCLSGHPLSQSNATHNHG 428
           LKGIKQSPKK  L           R  DA   + +  + + K        +++NATHNHG
Sbjct: 121 LKGIKQSPKKVNLVAALVRGM---RVEDALLQLQVTVKRASKTVYQVIHSARANATHNHG 180

Query: 429 MDSDRLLVAEAFWWGKGFFKEKI 488
           +D DRLLVAEAF  GKG+FK+++
Sbjct: 181 LDPDRLLVAEAF-VGKGYFKKRL 196

Query: 489  548
           
Sbjct: 241  196

Query: 549  608
           
Sbjct: 301  196

Query: 609  668
           
Sbjct: 361  196

Query: 669  728
           
Sbjct: 421  196

Query: 729  788
           
Sbjct: 481  196

Query: 789  840
           
Sbjct: 541  196

HSP 2 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 105/147 (71.43%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRA+KTVYQVIHSA+A             LL  
Sbjct: 123  PKKVNLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANATHNHGLDPEKLLLAE 182

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   +KR+SYH+KG+CGI+VRPECRLT+V+RE T EEEAEIAKL+VSNF+KLTKR
Sbjct: 183  AFVG-KGFYQKRISYHSKGRCGIKVRPECRLTIVVREITAEEEAEIAKLRVSNFKKLTKR 242

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNEE 801
            E RLVPHKLIE+T IWNRKGKA  NEE
Sbjct: 243  ERRLVPHKLIESTPIWNRKGKAGRNEE 268

Query: 802   861
            
Sbjct: 303   268

Query: 862   921
            
Sbjct: 363   268

Query: 922   981
            
Sbjct: 423   268

Query: 982   1041
            
Sbjct: 483   268

Query: 1042  1063
            
Sbjct: 543   268

[Close]

BLAST of WMU37149 vs. TrEMBL
Match: A0A059AUW6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00426 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.0e-21
Identity = 78/200 (39.00%), Postives = 111/200 (55.50%), Query Frame = 3


Query: 252 VGWQRCIRSILGHVQKRVELSYNVAAN-SSYRLQSSFSNGELLYLQQLLKPSSEGIAQPH 311
           + W+  +R++L    KR+E+  N AA  S  RL SS ++G    LQ+L +  S  + +P 
Sbjct: 1   MAWRTQLRTLLCRAGKRLEIDGNAAAGVSGSRLLSSSASGGAPNLQRLWESPSANVLRPL 60

Query: 312 FRCLQQMGISSSRMLLANKSEEXXXXXXXXXXXXXXXXXXXXXXQKVVCKPSKVQAILKG 371
           ++ LQQ GISSSR LLA+ S+                       QKVV KPSKVQA+LKG
Sbjct: 61  YQYLQQSGISSSRKLLADSSDAAPISSPLTPTLQLSSGTVES--QKVVSKPSKVQAVLKG 120

Query: 372 IKQSPKKSQLGCCFSSRHAR*RCTDA---VTINCEASFKNCLSGHPLSQSNATHNHGMDS 431
           IKQSPKK  L           R  DA   + +  + + K        +++NATHNHG+D 
Sbjct: 121 IKQSPKKVNLVAALVRGM---RVEDALLQLQVTVKRAAKTVYQVIHSARANATHNHGLDP 180

Query: 432 DRLLVAEAFWWGKGFFKEKI 491
           ++LL+AEAF  GKGF++++I
Sbjct: 181 EKLLLAEAF-VGKGFYQKRI 194

Query: 492  551
           
Sbjct: 241  194

Query: 552  611
           
Sbjct: 301  194

Query: 612  671
           
Sbjct: 361  194

Query: 672  731
           
Sbjct: 421  194

Query: 732  791
           
Sbjct: 481  194

Query: 792  840
           
Sbjct: 541  194

HSP 2 Score: 196.1 bits (497), Expect = 9.4e-47
Identity = 104/143 (72.73%), Postives = 117/143 (81.82%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+A             L+  
Sbjct: 124  PKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLVAE 183

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   RKR+SYHAKG+CG++VRPECRLTVVLRE TPEEEAEIAKL+V NFRKLTKR
Sbjct: 184  AFVG-KGFYRKRVSYHAKGRCGVKVRPECRLTVVLREITPEEEAEIAKLRVHNFRKLTKR 243

Query: 742  ENRLVPHKLIETTSIWNRKGKAK 801
            E RLVPH+LIETT IW+RK K+K
Sbjct: 244  EKRLVPHQLIETTPIWSRKSKSK 265

Query: 802   861
            
Sbjct: 304   265

Query: 862   921
            
Sbjct: 364   265

Query: 922   981
            
Sbjct: 424   265

Query: 982   1041
            
Sbjct: 484   265

Query: 1042  1051
            
Sbjct: 544   265

[Close]

BLAST of WMU37149 vs. TrEMBL
Match: A0A068USG5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031336001 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.8e-17
Identity = 71/201 (35.32%), Postives = 103/201 (51.24%), Query Frame = 3


Query: 249 MVGWQRCIRSILGHVQKRVELSYNVAANSSYRLQSSFS-NGELLYLQQLLKPSSEGIAQP 308
           MVGWQR ++S+L    +R++ S      S Y  +++    GE  +   L         +P
Sbjct: 1   MVGWQRHLQSLLRQAGRRLDQSRLSPLYSFYHSKAAPGLAGEAAHRNILWSSHFHCATRP 60

Query: 309 HFRCLQQMGISSSRMLLANKSEEXXXXXXXXXXXXXXXXXXXXXXQKVVCKPSKVQAILK 368
            +  +QQ+G +S+R LLA+ S E                      +K V KPSKVQA+LK
Sbjct: 61  LYHYVQQLGFTSTRKLLADSSNETPISSPLTPALALSGGKAEP--EKPVSKPSKVQAVLK 120

Query: 369 GIKQSPKKSQLGCCFSSRHAR*RCTDA---VTINCEASFKNCLSGHPLSQSNATHNHGMD 428
           GIKQSPKK  L           R  DA   + +  + + K        +++NATHNHG+D
Sbjct: 121 GIKQSPKKVNLVAALVRGM---RVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLD 180

Query: 429 SDRLLVAEAFWWGKGFFKEKI 488
            DRLLVAEAF  GKGF+++++
Sbjct: 181 PDRLLVAEAF-VGKGFYRKRV 195

Query: 489  548
           
Sbjct: 241  195

Query: 549  608
           
Sbjct: 301  195

Query: 609  668
           
Sbjct: 361  195

Query: 669  728
           
Sbjct: 421  195

Query: 729  788
           
Sbjct: 481  195

Query: 789  840
           
Sbjct: 541  195

HSP 2 Score: 195.7 bits (496), Expect = 1.2e-46
Identity = 108/166 (65.06%), Postives = 123/166 (74.10%), Query Frame = 1


Query: 562  KK*SVNLPKSKLY*RESNRVPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHS 621
            KK   N  K +   +   + PKKVNLVAALVRGMRVEDAL+QLQ+TVKRA+KTVYQVIHS
Sbjct: 105  KKVVPNRSKVQAVLKNIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHS 164

Query: 622  AKATQPTTMEWILIGSLLLRHFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTP 681
            A+A             L+   F G +   +KR+SYHAKGKCGI+ RPECRLTVV+RE TP
Sbjct: 165  ARANATHNHGLDPDRLLVAEAFIG-KGFYKKRISYHAKGKCGIKERPECRLTVVVREMTP 224

Query: 682  EEEAEIAKLKVSNFRKLTKRENRLVPHKLIETTSIWNRKGKAKVNE 741
            EEEAEIA+L+VS FRKLTKRE RLVPHKLIETT IWNRKGK    E
Sbjct: 225  EEEAEIARLRVSKFRKLTKRERRLVPHKLIETTPIWNRKGKGSSQE 269

Query: 742   801
            
Sbjct: 285   269

Query: 802   861
            
Sbjct: 345   269

Query: 862   921
            
Sbjct: 405   269

Query: 922   981
            
Sbjct: 465   269

Query: 982   1041
            
Sbjct: 525   269

Query: 1042  1060
            
Sbjct: 585   269

[Close]

BLAST of WMU37149 vs. NCBI nr
Match: gi|700209808|gb|KGN64904.1| (hypothetical protein Csa_1G153000 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 2.1e-52
Identity = 116/148 (78.38%), Postives = 124/148 (83.78%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKA             L+  
Sbjct: 125  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRLLVAE 184

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   RKRLSYHAKG+CG+EV+PECRLTVVLRETTPEEEA+IAKLKVSNFRKLTKR
Sbjct: 185  AFVG-KGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKLTKR 244

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNEEC 801
            E++LVPHKLIETT IWNRKGKAK N EC
Sbjct: 245  EHQLVPHKLIETTPIWNRKGKAKANTEC 271

Query: 802   861
            
Sbjct: 305   271

Query: 862   921
            
Sbjct: 365   271

Query: 922   981
            
Sbjct: 425   271

Query: 982   1041
            
Sbjct: 485   271

Query: 1042  1066
            
Sbjct: 545   271

[Close]

BLAST of WMU37149 vs. NCBI nr
Match: gi|1009164334|ref|XP_015900442.1| (PREDICTED: 39S ribosomal protein L22, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 200.3 bits (508), Expect = 7.2e-48
Identity = 107/147 (72.79%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+A             L+  
Sbjct: 126  PKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLVAE 185

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   +KR+SYHAKGKCGI+VRPECRLTVV+RETTPEEEAEIA+L+V NFRKLTKR
Sbjct: 186  AFVG-KGFFKKRVSYHAKGKCGIKVRPECRLTVVVRETTPEEEAEIARLRVHNFRKLTKR 245

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNEE 801
            E RLVPHKLIETT +WNRKGK K + E
Sbjct: 246  ERRLVPHKLIETTPVWNRKGKGKASHE 271

Query: 802   861
            
Sbjct: 306   271

Query: 862   921
            
Sbjct: 366   271

Query: 922   981
            
Sbjct: 426   271

Query: 982   1041
            
Sbjct: 486   271

Query: 1042  1063
            
Sbjct: 546   271

[Close]

BLAST of WMU37149 vs. NCBI nr
Match: gi|595806341|ref|XP_007202432.1| (hypothetical protein PRUPE_ppa009843mg [Prunus persica])

HSP 1 Score: 196.8 bits (499), Expect = 7.9e-47
Identity = 107/146 (73.29%), Postives = 118/146 (80.82%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+A             L+  
Sbjct: 125  PKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLVAE 184

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   +KRLSYHAKGKCG++VRPECRLTVV+RE TP+EEAEIAKLKV NF KLTKR
Sbjct: 185  AFVG-KGYFKKRLSYHAKGKCGVKVRPECRLTVVVREITPDEEAEIAKLKVKNFVKLTKR 244

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNE 801
            E RLVPHKLIETT IWNRKGKA+  E
Sbjct: 245  ERRLVPHKLIETTPIWNRKGKARERE 269

Query: 802   861
            
Sbjct: 305   269

Query: 862   921
            
Sbjct: 365   269

Query: 922   981
            
Sbjct: 425   269

Query: 982   1041
            
Sbjct: 485   269

Query: 1042  1060
            
Sbjct: 545   269

[Close]

BLAST of WMU37149 vs. NCBI nr
Match: gi|702433092|ref|XP_010069336.1| (PREDICTED: 39S ribosomal protein L22, mitochondrial-like [Eucalyptus grandis])

HSP 1 Score: 194.1 bits (492), Expect = 5.1e-46
Identity = 105/147 (71.43%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRA+KTVYQVIHSA+A             LL  
Sbjct: 123  PKKVNLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANATHNHGLDPEKLLLAE 182

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   +KR+SYH+KG+CGI+VRPECRLT+V+RE T EEEAEIAKL+VSNF+KLTKR
Sbjct: 183  AFVG-KGFYQKRISYHSKGRCGIKVRPECRLTIVVREITAEEEAEIAKLRVSNFKKLTKR 242

Query: 742  ENRLVPHKLIETTSIWNRKGKAKVNEE 801
            E RLVPHKLIE+T IWNRKGKA  NEE
Sbjct: 243  ERRLVPHKLIESTPIWNRKGKAGRNEE 268

Query: 802   861
            
Sbjct: 303   268

Query: 862   921
            
Sbjct: 363   268

Query: 922   981
            
Sbjct: 423   268

Query: 982   1041
            
Sbjct: 483   268

Query: 1042  1063
            
Sbjct: 543   268

[Close]

BLAST of WMU37149 vs. NCBI nr
Match: gi|720022576|ref|XP_010263080.1| (PREDICTED: 39S ribosomal protein L22, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-45
Identity = 103/141 (73.05%), Postives = 116/141 (82.27%), Query Frame = 1


Query: 622  PKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKATQPTTMEWILIGSLLLR 681
            PKKVNLVAALVRGMRVEDAL+QLQ+TVKRA+KTVYQVIHSA+A             L+  
Sbjct: 124  PKKVNLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANATHNHGLDPDRLLVAE 183

Query: 682  HFGGVRDSLRKRLSYHAKGKCGIEVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKLTKR 741
             F G +   +KRLSYHAKGKCGI+VRPECRLT+V+RE TPEEEAEIA+L+VSNFRKLTKR
Sbjct: 184  AFVG-KGFYKKRLSYHAKGKCGIKVRPECRLTIVVREMTPEEEAEIARLRVSNFRKLTKR 243

Query: 742  ENRLVPHKLIETTSIWNRKGK 801
            E RLVPHKLIETT +WNRK K
Sbjct: 244  ERRLVPHKLIETTPVWNRKSK 263

Query: 802   861
            
Sbjct: 304   263

Query: 862   921
            
Sbjct: 364   263

Query: 922   981
            
Sbjct: 424   263

Query: 982   1041
            
Sbjct: 484   263

Query: 1042  1045
            
Sbjct: 544   263

The following BLAST results are available for this feature:

BLAST of WMU37149 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52370.1	3.1e-41	63.57	Ribosomal protein L22p/L17e family protein	[more]
AT4G28360.1	4.0e-41	62.86	Ribosomal protein L22p/L17e family protein	[more]

BLAST of WMU37149 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL22_SINMW	1.0e-06	32.69	50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) GN=rplV PE=3 ...	[more]
RL22_RHIME	1.0e-06	32.69	50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) GN=rplV PE=3 SV=1	[more]
RL22_MARMM	1.4e-06	37.11	50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) GN=rplV PE=3 SV=1	[more]
RL22_METSB	2.3e-06	34.62	50S ribosomal protein L22 OS=Methylocella silvestris (strain BL2 / DSM 15510 / N...	[more]
RL22_RHILO	3.0e-06	32.69	50S ribosomal protein L22 OS=Rhizobium loti (strain MAFF303099) GN=rplV PE=3 SV=...	[more]

BLAST of WMU37149 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVB7_CUCSA	1.0e-53	78.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153000 PE=3 SV=1	[more]
A0A0A0LVB7_CUCSA	6.5e-48	56.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153000 PE=3 SV=1	[more]
M5VRJ8_PRUPE	1.8e-26	43.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009843mg PE=3 SV=1	[more]
A0A059AUW6_EUCGR	4.0e-21	39.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00426 PE=3 SV=1	[more]
A0A068USG5_COFCA	7.8e-17	35.32	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031336001 PE=3 SV=1	[more]

BLAST of WMU37149 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209808\|gb\|KGN64904.1\|	2.1e-52	78.38	hypothetical protein Csa_1G153000 [Cucumis sativus]	[more]
gi\|1009164334\|ref\|XP_015900442.1\|	7.2e-48	72.79	PREDICTED: 39S ribosomal protein L22, mitochondrial-like [Ziziphus jujuba]	[more]
gi\|595806341\|ref\|XP_007202432.1\|	7.9e-47	73.29	hypothetical protein PRUPE_ppa009843mg [Prunus persica]	[more]
gi\|702433092\|ref\|XP_010069336.1\|	5.1e-46	71.43	PREDICTED: 39S ribosomal protein L22, mitochondrial-like [Eucalyptus grandis]	[more]
gi\|720022576\|ref\|XP_010263080.1\|	1.5e-45	73.05	PREDICTED: 39S ribosomal protein L22, mitochondrial-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001063	Ribosomal_L22
IPR005727	Ribosomal_L22_bac/chlpt-type

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0015934	large ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla003541	Cla003541	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0026078	S1_0026078	EST
S1_0040641	S1_0040641	EST
S1_0110235	S1_0110235	EST
S1_0157605	S1_0157605	EST
S2_0053305	S2_0053305	EST
S2_0059639	S2_0059639	EST
S2_0108665	S2_0108665	EST
S2_0168139	S2_0168139	EST
S2_0177901	S2_0177901	EST
S3_0099785	S3_0099785	EST
S3_0114858	S3_0114858	EST
S3_0139451	S3_0139451	EST
S4_0168562	S4_0168562	EST
WMN13D02	WMN13D02	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001063	Ribosomal protein L22/L17	GENE3D	G3DSA:3.90.470.10		coord: 113..223 score: 3.2
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 120..220 score: 1.8
IPR001063	Ribosomal protein L22/L17	unknown	SSF54843	Ribosomal protein L22	coord: 110..222 score: 1.44
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	PANTHER	PTHR13501	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	coord: 27..263 score: 2.1
None	No IPR available	PANTHER	PTHR13501:SF2	39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL	coord: 27..263 score: 2.1