WMU32968 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU32968
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr9 : 29885583 .. 29886013 (+)
Sequence length438
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ATTATGGGAAAGAGGAAAAGAGAAATGTCGGGCATGGTAGAGTCATGGATGAAGCAGCTTGGAAAGTGGAAGAACAGAGTTGAAGCTCAACGGAAGAAGAAGCCATTGATGTCCAAATCCAACCAATTACTGCCCCCAACACACCTCAAACAGACCATAGATTCCGATTCCGACGACACAGAAACCACCACCCTCTCCGAATCCACCATTTGTTTGCTCATGGATCGCTTTGCTCCCATGTAATCATCCCCTGTTTCAAGAATTCGTCTTCCTCTGTTTTTCTCCACCGCCACCACGACGCCCGCCGCGGGTTTGGAAGGTTTTGGCTTTCGTTCAATGAGGCCTAACAAAGGCAACATATTTTGTTTGGAAAATTGCTTAAACCACCATTAATTAATTATGGGATTTGTTATAATTCTACTCTTCAACTTTGGATTT
Homology
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BLAST of WMU32968 vs. TrEMBL
Match: A0A0A0LP24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237740 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07
Identity = 39/80 (48.75%), Postives = 44/80 (55.00%), Query Frame = 1 

Query: 16  KREMSGMVESWMKQLGKWKNRVEAQ--RKKKPLMSKSNQLLPPTHLKQ---XXXXXXXXX 75
           K +MS MVESWM +LGKW+NRVEAQ    KKPLM KS Q L   H KQ            
Sbjct: 34  KVKMSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQ-LQTDHFKQPAKTHMADSDDT 93

Query: 76  XXXXXXXXXXCLLMDRFAPM 135
                     CLL+DRFAP+
Sbjct: 94  ETSVLSESTICLLIDRFAPL 112

Query: 136  195
           
Sbjct: 154  112

Query: 196  241
           
Sbjct: 214  112

The following BLAST results are available for this feature:
BLAST of WMU32968 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP24_CUCSA2.4e-0748.75Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237740 PE=4 SV=1[more]
BLAST of WMU32968 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla010284Cla010284gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0134078S1_0134078EST
S1_0144189S1_0144189EST
S4_0063486S4_0063486EST
WMN68C10WMN68C10EST