WMU32635 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU32635
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ribosomal protein
Location	Chr1 : 13596711 .. 13598871 (-)
Sequence length	992

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TATGCCGTCGCTGCTCTTTTGTTCTCCTTTGTTTCAACCTTCATATTCTTAATAGCATTACTTTAATCCCCACTTCATGTTTTTCTGGATTTTGCGCATTTTTATGACTGAAGTGTATAGTGTCTTTGCGAAGGCGAAGATTCGAAAATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGGAAGTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTAGGGGATGCCTCGCACGTTGAAGAGGCCGAGAAAATTGGCTTAGACTATATGGATGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAGCTTGCCAAAAAATACCATGCCTTTTGGCATCTGAAGCTATAATCAAGCAGATCCCTCGTCTTCTAGGCCCTGGTCTCAACAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAGCGCTTGAATCCAAAGTTAACGAGACCAAGGCAATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCCGTTGGAAATGTTGCCATGGATGAGAAGCAAGTCTTCCAGAATGTTCAAATGAGTGTCAATTTCCTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTCAGGTGCCTGTACCTGAAGAGCACGATGGGCAAGTCATACCGGGTTTTCTAAGCTCTATTAGCAATCTAGTCAGTCTTGTGTTCGATCTTTTTACTGTTGACGTTATTTTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGAATGATTATTGAACAAAGAAACAGGGATGATTTTTCTCCTTTAAAGTGACAATTGATAACGAAGTTTTTATTCCCATCAACCAAACCCATCATGAACGTTACGTT

Library


Library category	ESTs
watermelon fruit 10d library	5
watermelon fruit 18d library	5
watermelon fruit 26d library	6
watermelon fruit 34d library	4
watermelon fusarium SSH library	1

Homology

[Close]

BLAST of WMU32635 vs. TAIR10
Match: AT5G22440.1 (AT5G22440.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-39
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+FQNVQM
Sbjct: 126 PGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQM 185

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 186 SVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

Query: 638  697
           
Sbjct: 246  217

Query: 698  757
           
Sbjct: 306  217

Query: 758  794
           
Sbjct: 366  217

HSP 2 Score: 149.4 bits (376), Expect = 3.8e-36
Identity = 78/110 (70.91%), Postives = 82/110 (74.55%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKK-RKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 207
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 208 PKMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           PKMKICMLGDA HVEEAEKIGL+ MDVE                  +HAF
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAF 110

Query: 268  327
           
Sbjct: 121  110

Query: 328  387
           
Sbjct: 181  110

Query: 388  447
           
Sbjct: 241  110

Query: 448  475
           
Sbjct: 301  110

HSP 3 Score: 42.0 bits (97), Expect = 8.5e-04
Identity = 19/26 (73.08%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASE++IKQIPRLLGPGLNK
Sbjct: 105 KKFHAFLASESVIKQIPRLLGPGLNK 130

Query: 516  534
           
Sbjct: 165  130

[Close]

BLAST of WMU32635 vs. TAIR10
Match: AT1G08360.1 (AT1G08360.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-39
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+FQNVQM
Sbjct: 125 PGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 149.1 bits (375), Expect = 4.9e-36
Identity = 76/109 (69.72%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDA HVEEAEK+GL+ MDVE                  YHAF
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

HSP 3 Score: 41.6 bits (96), Expect = 1.1e-03
Identity = 19/26 (73.08%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASE++IKQIPRLLGPGLNK
Sbjct: 104 KKYHAFLASESVIKQIPRLLGPGLNK 129

Query: 516  534
           
Sbjct: 164  129

[Close]

BLAST of WMU32635 vs. TAIR10
Match: AT2G27530.1 (AT2G27530.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-38
Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+FQNVQM
Sbjct: 125 PGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 149.8 bits (377), Expect = 2.9e-36
Identity = 76/109 (69.72%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDA HVEEAEK+GL  MDVE                  YHAF
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

HSP 3 Score: 40.4 bits (93), Expect = 2.5e-03
Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3


Query: 474 LASEAIIKQIPRLLGPGLNK 533
           LASE++IKQIPRLLGPGLNK
Sbjct: 110 LASESVIKQIPRLLGPGLNK 129

[Close]

BLAST of WMU32635 vs. Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.5e-38
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+FQNVQM
Sbjct: 125 PGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 149.1 bits (375), Expect = 8.8e-35
Identity = 76/109 (69.72%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDA HVEEAEK+GL+ MDVE                  YHAF
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

HSP 3 Score: 41.6 bits (96), Expect = 2.0e-02
Identity = 19/26 (73.08%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASE++IKQIPRLLGPGLNK
Sbjct: 104 KKYHAFLASESVIKQIPRLLGPGLNK 129

Query: 516  534
           
Sbjct: 164  129

[Close]

BLAST of WMU32635 vs. Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.5e-38
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+FQNVQM
Sbjct: 126 PGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQM 185

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 186 SVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

Query: 638  697
           
Sbjct: 246  217

Query: 698  757
           
Sbjct: 306  217

Query: 758  794
           
Sbjct: 366  217

HSP 2 Score: 149.4 bits (376), Expect = 6.7e-35
Identity = 78/110 (70.91%), Postives = 82/110 (74.55%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKK-RKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 207
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 208 PKMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           PKMKICMLGDA HVEEAEKIGL+ MDVE                  +HAF
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAF 110

Query: 268  327
           
Sbjct: 121  110

Query: 328  387
           
Sbjct: 181  110

Query: 388  447
           
Sbjct: 241  110

Query: 448  475
           
Sbjct: 301  110

HSP 3 Score: 42.0 bits (97), Expect = 1.5e-02
Identity = 19/26 (73.08%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASE++IKQIPRLLGPGLNK
Sbjct: 105 KKFHAFLASESVIKQIPRLLGPGLNK 130

Query: 516  534
           
Sbjct: 165  130

[Close]

BLAST of WMU32635 vs. Swiss-Prot
Match: R10A_ORYSI (60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.5e-38
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+ QN+QM
Sbjct: 125 PGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 158.3 bits (399), Expect = 1.4e-37
Identity = 78/109 (71.56%), Postives = 83/109 (76.15%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMK+CMLGDA HVEEAEKIGLDYMDVE                  YHAF
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

HSP 3 Score: 43.1 bits (100), Expect = 6.8e-03
Identity = 21/26 (80.77%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASEAIIKQIPRLLGPGLNK
Sbjct: 104 KKYHAFLASEAIIKQIPRLLGPGLNK 129

Query: 516  534
           
Sbjct: 164  129

[Close]

BLAST of WMU32635 vs. Swiss-Prot
Match: R10A_ORYSJ (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.5e-38
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+ QN+QM
Sbjct: 125 PGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 158.3 bits (399), Expect = 1.4e-37
Identity = 78/109 (71.56%), Postives = 83/109 (76.15%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMK+CMLGDA HVEEAEKIGLDYMDVE                  YHAF
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

HSP 3 Score: 43.1 bits (100), Expect = 6.8e-03
Identity = 21/26 (80.77%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASEAIIKQIPRLLGPGLNK
Sbjct: 104 KKYHAFLASEAIIKQIPRLLGPGLNK 129

Query: 516  534
           
Sbjct: 164  129

[Close]

BLAST of WMU32635 vs. Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-37
Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++M+EKQ+FQNVQM
Sbjct: 125 PGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 149.8 bits (377), Expect = 5.1e-35
Identity = 76/109 (69.72%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDA HVEEAEK+GL  MDVE                  YHAF
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

HSP 3 Score: 40.4 bits (93), Expect = 4.4e-02
Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3


Query: 474 LASEAIIKQIPRLLGPGLNK 533
           LASE++IKQIPRLLGPGLNK
Sbjct: 110 LASESVIKQIPRLLGPGLNK 129

[Close]

BLAST of WMU32635 vs. TrEMBL
Match: A0A0A0LVE6_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.8e-42
Identity = 90/109 (82.57%), Postives = 92/109 (84.40%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDASH+EEAEKIGL+YMDVEG                 YHAF
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

[Close]

BLAST of WMU32635 vs. TrEMBL
Match: A0A0A0LVE6_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.7e-40
Identity = 86/92 (93.48%), Postives = 88/92 (95.65%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGVAVGNV+MDEKQVFQNVQM
Sbjct: 125 PGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQNVQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 42.0 bits (97), Expect = 1.7e+00
Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASE+IIKQIPRLLGPGLNK
Sbjct: 104 KKYHAFLASESIIKQIPRLLGPGLNK 129

Query: 516  534
           
Sbjct: 164  129

HSP 3 Score: 176.8 bits (447), Expect = 4.4e-41
Identity = 90/109 (82.57%), Postives = 90/109 (82.57%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDASHVEEAEKIGLDYMDVEG                 YHAF
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

[Close]

BLAST of WMU32635 vs. TrEMBL
Match: A0A0A0KEW8_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 2


Query: 518 PWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLKKVLCMGVAVGNVAMDEKQVFQNVQM 577
           P   +AGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AM+EKQVFQNVQM
Sbjct: 125 PGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQM 184

Query: 578 SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 637
           SVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 185 SVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

Query: 638  697
           
Sbjct: 245  216

Query: 698  757
           
Sbjct: 305  216

Query: 758  794
           
Sbjct: 365  216

HSP 2 Score: 43.1 bits (100), Expect = 7.5e-01
Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASEAIIKQIPRLLGPGLNK
Sbjct: 104 KKYHAFLASEAIIKQIPRLLGPGLNK 129

Query: 516  534
           
Sbjct: 164  129

HSP 3 Score: 172.6 bits (436), Expect = 8.2e-40
Identity = 86/114 (75.44%), Postives = 90/114 (78.95%), Query Frame = 1


Query: 133 GEDSKMSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLP 192
           G+D KMSKLQS+ALREAI+ I  D NEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 36  GKDEKMSKLQSEALREAITGIKNDCNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 95

Query: 193 HIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 252
           HIPRPKMK+CMLGDA HVEEAEKIGLDYMDVEG                 YHAF
Sbjct: 96  HIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKRLAKKYHAF 149

Query: 253  312
           
Sbjct: 156  149

Query: 313  372
           
Sbjct: 216  149

Query: 373  432
           
Sbjct: 276  149

Query: 433  475
           
Sbjct: 336  149

[Close]

BLAST of WMU32635 vs. TrEMBL
Match: A0A059AAS7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00492 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 9.8e-01
Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNK 515
           +K    LASEA+IKQIPRLLGPGLNK
Sbjct: 144 KKYHAFLASEAVIKQIPRLLGPGLNK 169

Query: 516  534
           
Sbjct: 204  169

HSP 2 Score: 172.6 bits (436), Expect = 8.2e-40
Identity = 86/114 (75.44%), Postives = 90/114 (78.95%), Query Frame = 1


Query: 133 GEDSKMSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLP 192
           G+D KMSKLQS+ALREAI+ I  D NEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 36  GKDEKMSKLQSEALREAITGIKNDCNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 95

Query: 193 HIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 252
           HIPRPKMK+CMLGDA HVEEAEKIGLDYMDVEG                 YHAF
Sbjct: 96  HIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKRLAKKYHAF 149

Query: 253  312
           
Sbjct: 156  149

Query: 313  372
           
Sbjct: 216  149

Query: 373  432
           
Sbjct: 276  149

Query: 433  475
           
Sbjct: 336  149

[Close]

BLAST of WMU32635 vs. TrEMBL
Match: A0A059A9Q5_EUCGR (Ribosomal protein OS=Eucalyptus grandis GN=EUGRSUZ_J00492 PE=3 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 3.4e-01
Identity = 25/46 (54.35%), Postives = 29/46 (63.04%), Query Frame = 3


Query: 456 QKIPCLLASEAIIKQIPRLLGPGLNKQESSQHW*HTKKRLNPKLTR 515
           +K    LASEA+IKQIPRLLGPGLNK  +       +  L PKL R
Sbjct: 144 KKYHAFLASEAVIKQIPRLLGPGLNKAGNFPPSSLIRNPLMPKLMR 189

Query: 516  575
           
Sbjct: 204  189

Query: 576  594
           
Sbjct: 264  189

HSP 2 Score: 172.6 bits (436), Expect = 8.2e-40
Identity = 86/114 (75.44%), Postives = 90/114 (78.95%), Query Frame = 1


Query: 133 GEDSKMSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLP 192
           G+D KMSKLQS+ALREAI+ I  D NEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 36  GKDEKMSKLQSEALREAITGIKNDCNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 95

Query: 193 HIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 252
           HIPRPKMK+CMLGDA HVEEAEKIGLDYMDVEG                 YHAF
Sbjct: 96  HIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKRLAKKYHAF 149

Query: 253  312
           
Sbjct: 156  149

Query: 313  372
           
Sbjct: 216  149

Query: 373  432
           
Sbjct: 276  149

Query: 433  475
           
Sbjct: 336  149

[Close]

BLAST of WMU32635 vs. NCBI nr
Match: gi|449443440|ref|XP_004139485.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 90/109 (82.57%), Postives = 92/109 (84.40%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDASH+EEAEKIGL+YMDVEG                 YHAF
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

[Close]

BLAST of WMU32635 vs. NCBI nr
Match: gi|659071695|ref|XP_008461453.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 90/109 (82.57%), Postives = 92/109 (84.40%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDASH+EEAEKIGL+YMDVEG                 YHAF
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

[Close]

BLAST of WMU32635 vs. NCBI nr
Match: gi|659117410|ref|XP_008458587.1| (PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 6.3e-41
Identity = 90/109 (82.57%), Postives = 90/109 (82.57%), Query Frame = 1


Query: 148 MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 207
           MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 208 KMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 267
           KMKICMLGDASHVEEAEKIGLDYMDVEG                 YHAF
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAF 109

Query: 268  327
           
Sbjct: 121  109

Query: 328  387
           
Sbjct: 181  109

Query: 388  447
           
Sbjct: 241  109

Query: 448  475
           
Sbjct: 301  109

[Close]

BLAST of WMU32635 vs. NCBI nr
Match: gi|955721284|ref|XP_014660930.1| (PREDICTED: 60S ribosomal protein L10a-like [Setaria italica])

HSP 1 Score: 174.5 bits (441), Expect = 3.1e-40
Identity = 97/177 (54.80%), Postives = 119/177 (67.23%), Query Frame = 2


Query: 266 MILKRTSVSVVL*SCHTFPVPR*RYAC*GMPRTLKRPRKLA*TIWMWKA*RS*IRTRNW* 325
           M  +RTSVSV   SC T P P+ +    G  + ++   K+       +A +   + +   
Sbjct: 41  MTRRRTSVSVAPLSCPTSPAPKMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLV 100

Query: 326 RSLPKNTMPF-GI*SYNQADPSSSRPWSQQAGKFPTLVTHQEALESKVNETKAMVKFQLK 385
           + L K    F    +  +  P    P   +AGKFPTLVTHQE+LESKVNETKA VKFQLK
Sbjct: 101 KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLK 160

Query: 386 KVLCMGVAVGNVAMDEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 445
           KVLCMGVAVGN++M+EKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK YRVF
Sbjct: 161 KVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 217

Query: 446  505
           
Sbjct: 221  217

Query: 506  565
           
Sbjct: 281  217

Query: 566  625
           
Sbjct: 341  217

Query: 626  685
           
Sbjct: 401  217

Query: 686  745
           
Sbjct: 461  217

Query: 746  794
           
Sbjct: 521  217

[Close]

BLAST of WMU32635 vs. NCBI nr
Match: gi|629084480|gb|KCW50837.1| (hypothetical protein EUGRSUZ_J00492 [Eucalyptus grandis])

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-39
Identity = 86/114 (75.44%), Postives = 90/114 (78.95%), Query Frame = 1


Query: 133 GEDSKMSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLP 192
           G+D KMSKLQS+ALREAI+ I  D NEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 36  GKDEKMSKLQSEALREAITGIKNDCNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 95

Query: 193 HIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAF 252
           HIPRPKMK+CMLGDA HVEEAEKIGLDYMDVEG                 YHAF
Sbjct: 96  HIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKRLAKKYHAF 149

Query: 253  312
           
Sbjct: 156  149

Query: 313  372
           
Sbjct: 216  149

Query: 373  432
           
Sbjct: 276  149

Query: 433  475
           
Sbjct: 336  149

The following BLAST results are available for this feature:

BLAST of WMU32635 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22440.1	3.7e-39	84.78	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	3.7e-39	83.70	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	1.4e-38	82.61	Ribosomal protein L1p/L10e family	[more]

BLAST of WMU32635 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R10A1_ARATH	6.5e-38	83.70	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1	[more]
R10A3_ARATH	6.5e-38	84.78	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1	[more]
R10A_ORYSI	8.5e-38	83.70	60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1	[more]
R10A_ORYSJ	8.5e-38	83.70	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1	[more]
R10A2_ARATH	2.5e-37	82.61	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1	[more]

BLAST of WMU32635 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVE6_CUCSA	8.8e-42	82.57	Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1	[more]
A0A0A0LVE6_CUCSA	3.7e-40	93.48	Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1	[more]
A0A0A0KEW8_CUCSA	1.1e-39	91.30	Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1	[more]
A0A059AAS7_EUCGR	9.8e-01	76.92	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00492 PE=4 SV=1	[more]
A0A059A9Q5_EUCGR	3.4e-01	54.35	Ribosomal protein OS=Eucalyptus grandis GN=EUGRSUZ_J00492 PE=3 SV=1	[more]

BLAST of WMU32635 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443440\|ref\|XP_004139485.1\|	1.3e-41	82.57	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus]	[more]
gi\|659071695\|ref\|XP_008461453.1\|	1.3e-41	82.57	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo]	[more]
gi\|659117410\|ref\|XP_008458587.1\|	6.3e-41	82.57	PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo]	[more]
gi\|955721284\|ref\|XP_014660930.1\|	3.1e-40	54.80	PREDICTED: 60S ribosomal protein L10a-like [Setaria italica]	[more]
gi\|629084480\|gb\|KCW50837.1\|	1.2e-39	75.44	hypothetical protein EUGRSUZ_J00492 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR016095	Ribosomal_L1_3-a/b-sand
IPR023674	Ribosomal_L1-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla001098	Cla001098	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0033619	S1_0033619	EST
S1_0046060	S1_0046060	EST
S1_0075823	S1_0075823	EST
S1_0084743	S1_0084743	EST
S1_0103370	S1_0103370	EST
S2_0019118	S2_0019118	EST
S2_0054961	S2_0054961	EST
S2_0079692	S2_0079692	EST
S2_0093648	S2_0093648	EST
S2_0150082	S2_0150082	EST
S3_0033871	S3_0033871	EST
S3_0060751	S3_0060751	EST
S3_0074798	S3_0074798	EST
S3_0117345	S3_0117345	EST
S3_0119565	S3_0119565	EST
S3_0136745	S3_0136745	EST
S4_0050744	S4_0050744	EST
S4_0058458	S4_0058458	EST
S4_0059557	S4_0059557	EST
S4_0084724	S4_0084724	EST
SSH0002291	SSH0002291	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich	GENE3D	G3DSA:3.30.190.20		coord: 6..60 score: 5.9E-28coord: 151..176 score: 5.9
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	G3DSA:3.40.50.790		coord: 62..150 score: 4.0
IPR023674	Ribosomal protein L1-like	unknown	SSF56808	Ribosomal protein L1	coord: 21..176 score: 3.66
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 1..176 score: 1.3E
None	No IPR available	PANTHER	PTHR23105:SF55	SUBFAMILY NOT NAMED	coord: 1..176 score: 1.3E