WMU31842 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU31842
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTransmembrane protein, putative
LocationChr5 : 737218 .. 740282 (+)
Sequence length920
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AAATAAATTTTATCATAAAATGAAACAAAATCCATCGGAGCTTTGGCTTCTTCTAAACCCTATTCGTCCAGCCACCTCCGCCCTCCCATTACCGGCCACTGCCCTTCCCGCCGCACGCCGCTGTCGCTCCAGAGCGTATATTTTCCTATTTCGTCTACCTGCCTCGATCTGGTTGAAGGCTGTAAGAGTTGAGTTAGAGGCAACCTAGAGATAGCGATGGGAGAAGAGCAAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCCGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTATGAAGTTGTATTATTCAAGCAGAACAAGATCATCAAGTTGCTGGGTTTCGTTTTATTGTTAATCCTAGTTTTGGCTCTCATAAGTGAACATCTTTTTTAATGCCTCTAGGAAGTTGTACAAAATTTGGAACCAATAACTGTTTTTTTCCCCTGAAGTTATAACCTCCAATTGAGCTATTGGTTGTTTCTCTAATTATAGATCAATCGCAACTGACATTAAGTGCGATCATTTTTGGTATAAACCTTGCGCAGATGGCCGCTTTCCTCTGTTAAAGCTGGGTTGTAATACTCTACTGAAACCAAACTTTAATTTGTAAATACCCTTAACATAATCAATTGTGTTGTATCCTGGATTGTACAAAGAATTGATATGTGATTTGAAATATCTAATTTTTTAAAAAAA
Homology
[Close]
BLAST of WMU31842 vs. TAIR10
Match: AT5G16950.1 (AT5G16950.1 unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-11
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSATNI-----IKKRRPTKIRQIPDYYFLPRRSLPSXXXXX 292
           KDP+KG +W     +  K P+ + +      +K+ P  +    + YFLPR+  P      
Sbjct: 7   KDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRALAYY 66

Query: 293 XXXXXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                      M++E WIN KVK+DGGVIWEFDK
Sbjct: 67  GSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99

Query: 353  412
           
Sbjct: 127  99

Query: 413  472
           
Sbjct: 187  99

Query: 473  500
           
Sbjct: 247  99

[Close]
BLAST of WMU31842 vs. TrEMBL
Match: A0A0A0L8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.7e-32
Identity = 69/90 (76.67%), Postives = 73/90 (81.11%), Query Frame = 2 

Query: 230 KKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXXX 289
           +KDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS         
Sbjct: 14  QKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYGACI 73

Query: 290 XXXXXXXMLVEIWINDKVKKDGGVIWEFDK 349
                  MLVEIWINDK+KKDGGVIWEFDK
Sbjct: 74  AGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

Query: 350  409
           
Sbjct: 134  103

Query: 410  469
           
Sbjct: 194  103

Query: 470  500
           
Sbjct: 254  103

[Close]
BLAST of WMU31842 vs. TrEMBL
Match: A0A067JX58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSATN--IIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXX 292
           KDPFKGVDWKA+GG++QK+PSA+   +IKKR P K+RQIPDYYFLPRRSLPS        
Sbjct: 7   KDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFYGGC 66

Query: 293 XXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                   ML+EIWIN KVK+DGGVIWEFDK
Sbjct: 67  IAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 353  412
           
Sbjct: 127  97

Query: 413  472
           
Sbjct: 187  97

Query: 473  500
           
Sbjct: 247  97

[Close]
BLAST of WMU31842 vs. TrEMBL
Match: B9SBE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXX 292
           KDPFKGVDWKA+GG++QK+PSA   ++I+KR P KIRQIPDYYFLPRRSLPS        
Sbjct: 7   KDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFYGAC 66

Query: 293 XXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                   ML+EIWIN KVK+DGGVIWEFDK
Sbjct: 67  IAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 353  412
           
Sbjct: 127  97

Query: 413  472
           
Sbjct: 187  97

Query: 473  500
           
Sbjct: 247  97

[Close]
BLAST of WMU31842 vs. TrEMBL
Match: A0A067KCR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12070 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 60/91 (65.93%), Postives = 66/91 (72.53%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXX 292
           KDP KGVDWKA+G ++QK+PSA    IIKKR P KIRQIPDYYFLPRRSLPS        
Sbjct: 7   KDPLKGVDWKAIGSELQKDPSAGAKQIIKKRLPKKIRQIPDYYFLPRRSLPSAIAFYGAC 66

Query: 293 XXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                   ML+EIWIN KVK+DGGVIWEFDK
Sbjct: 67  IAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 353  412
           
Sbjct: 127  97

Query: 413  472
           
Sbjct: 187  97

Query: 473  500
           
Sbjct: 247  97

[Close]
BLAST of WMU31842 vs. TrEMBL
Match: M5WRN2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015708mg PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.9e-24
Identity = 59/89 (66.29%), Postives = 62/89 (69.66%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXXXX 292
           KDPFKGVDWKAVG DMQK+PS    IKKR P KIRQIPD YFLPRRSLP           
Sbjct: 76  KDPFKGVDWKAVGSDMQKDPSVKPGIKKRLPRKIRQIPDCYFLPRRSLPYNIAFFGACIA 135

Query: 293 XXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                 ML+E+WIN KVK DGGVIWEFDK
Sbjct: 136 GGIGAGMLLEVWINKKVKDDGGVIWEFDK 164

Query: 353  412
           
Sbjct: 196  164

Query: 413  472
           
Sbjct: 256  164

Query: 473  500
           
Sbjct: 316  164

[Close]
BLAST of WMU31842 vs. NCBI nr
Match: gi|449432034|ref|XP_004133805.1| (PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 4.9e-32
Identity = 69/90 (76.67%), Postives = 73/90 (81.11%), Query Frame = 2 

Query: 230 KKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXXX 289
           +KDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS         
Sbjct: 14  QKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYGACI 73

Query: 290 XXXXXXXMLVEIWINDKVKKDGGVIWEFDK 349
                  MLVEIWINDK+KKDGGVIWEFDK
Sbjct: 74  AGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

Query: 350  409
           
Sbjct: 134  103

Query: 410  469
           
Sbjct: 194  103

Query: 470  500
           
Sbjct: 254  103

[Close]
BLAST of WMU31842 vs. NCBI nr
Match: gi|659074925|ref|XP_008437869.1| (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 4.2e-31
Identity = 67/90 (74.44%), Postives = 72/90 (80.00%), Query Frame = 2 

Query: 230 KKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXXX 289
           +KDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP          
Sbjct: 14  QKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGACI 73

Query: 290 XXXXXXXMLVEIWINDKVKKDGGVIWEFDK 349
                  MLVE+WINDK+KKDGGVIWEFDK
Sbjct: 74  AGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

Query: 350  409
           
Sbjct: 134  103

Query: 410  469
           
Sbjct: 194  103

Query: 470  500
           
Sbjct: 254  103

[Close]
BLAST of WMU31842 vs. NCBI nr
Match: gi|802694456|ref|XP_012083179.1| (PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas])

HSP 1 Score: 126.7 bits (317), Expect = 6.9e-26
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSATN--IIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXX 292
           KDPFKGVDWKA+GG++QK+PSA+   +IKKR P K+RQIPDYYFLPRRSLPS        
Sbjct: 7   KDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFYGGC 66

Query: 293 XXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                   ML+EIWIN KVK+DGGVIWEFDK
Sbjct: 67  IAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 353  412
           
Sbjct: 127  97

Query: 413  472
           
Sbjct: 187  97

Query: 473  500
           
Sbjct: 247  97

[Close]
BLAST of WMU31842 vs. NCBI nr
Match: gi|255564645|ref|XP_002523317.1| (PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis])

HSP 1 Score: 126.3 bits (316), Expect = 9.0e-26
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXX 292
           KDPFKGVDWKA+GG++QK+PSA   ++I+KR P KIRQIPDYYFLPRRSLPS        
Sbjct: 7   KDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFYGAC 66

Query: 293 XXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                   ML+EIWIN KVK+DGGVIWEFDK
Sbjct: 67  IAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 353  412
           
Sbjct: 127  97

Query: 413  472
           
Sbjct: 187  97

Query: 473  500
           
Sbjct: 247  97

[Close]
BLAST of WMU31842 vs. NCBI nr
Match: gi|802635256|ref|XP_012078200.1| (PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas])

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 60/91 (65.93%), Postives = 66/91 (72.53%), Query Frame = 2 

Query: 233 KDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSXXXXXXXX 292
           KDP KGVDWKA+G ++QK+PSA    IIKKR P KIRQIPDYYFLPRRSLPS        
Sbjct: 7   KDPLKGVDWKAIGSELQKDPSAGAKQIIKKRLPKKIRQIPDYYFLPRRSLPSAIAFYGAC 66

Query: 293 XXXXXXXXMLVEIWINDKVKKDGGVIWEFDK 352
                   ML+EIWIN KVK+DGGVIWEFDK
Sbjct: 67  IAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 353  412
           
Sbjct: 127  97

Query: 413  472
           
Sbjct: 187  97

Query: 473  500
           
Sbjct: 247  97

The following BLAST results are available for this feature:
BLAST of WMU31842 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G16950.18.7e-1136.17 unknown protein[more]
BLAST of WMU31842 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8I7_CUCSA7.7e-3276.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1[more]
A0A067JX58_JATCU1.1e-2565.93Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1[more]
B9SBE8_RICCO1.4e-2565.93Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1[more]
A0A067KCR1_JATCU1.5e-2465.93Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12070 PE=4 SV=1[more]
M5WRN2_PRUPE5.9e-2466.29Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015708mg PE=4 S... [more]
BLAST of WMU31842 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432034|ref|XP_004133805.1|4.9e-3276.67PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus][more]
gi|659074925|ref|XP_008437869.1|4.2e-3174.44PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo][more]
gi|802694456|ref|XP_012083179.1|6.9e-2665.93PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas][more]
gi|255564645|ref|XP_002523317.1|9.0e-2665.93PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis][more]
gi|802635256|ref|XP_012078200.1|1.0e-2465.93PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021142Cla021142gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0039872S1_0039872EST
S2_0109564S2_0109564EST
S3_0120971S3_0120971EST
S3_0128802S3_0128802EST
S3_0141496S3_0141496EST
S4_0167465S4_0167465EST
WMN19D10WMN19D10EST