WMU31178 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU31178
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ras-related protein Rab-18
Location	Chr8 : 11855932 .. 11857655 (+)
Sequence length	452

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACAGATCAGGACTGTGTCAAGATGCTTGTTGGAAACAAAGTTGATAAAGAATCTGAAAGGGCTGTAAGCAGAGAAGATGGGATTGCACTAGCCAACAAGCTTGGATCTTTGTTTCTTGAATGCAGTGCTAAAACCAGAGAAAATGTAGAGAAATGCTTTGAAGAACTTGCAATTAAGATAATGGAGGTTCCCCAGTTTCTTGGAGGAAAGATCCACTGTTGTAAAAGAGGAACATTTTTAAAGGCAAAAAGCAGGAAGGTCAAGCTCAACAAAGTGGTGGTTGTTGCTCTTAGAAAGCAACTTTATATAATAATAAACCACATCATTGTATATGTAAATTTATTCTCTCACTCTGTTGCTTTTCCCCATTTCAGTTGTAAGTTATTATTTGTACTATCTGAAAGGGAAAAACTACGCTTATAATTACAATTAGAATTTTAGCTTTGTTGTAC

Library


Library category	ESTs
watermelon fruit 26d library	5

Homology

[Close]

BLAST of WMU31178 vs. TAIR10
Match: AT5G03530.1 (AT5G03530.1 RAB GTPase homolog C2A)

HSP 1 Score: 107.8 bits (268), Expect = 5.7e-24
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+Q+CV+MLVGNKVD+ESER VSRE+GIALA +L  +FLECSA+TR+NVE+CFEELA+KI
Sbjct: 116 TNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKI 175

Query: 61  MEVPQFL 120
           MEVP  L
Sbjct: 176 MEVPSLL 182

Query: 121  180
           
Sbjct: 236  182

Query: 181  202
           
Sbjct: 296  182

[Close]

BLAST of WMU31178 vs. TAIR10
Match: AT3G09910.1 (AT3G09910.1 RAB GTPase homolog C2B)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-22
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+ DC+KMLVGNKVD+ESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KI
Sbjct: 116 TNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKI 175

Query: 61  MEVPQFL 120
           MEVP  L
Sbjct: 176 MEVPSLL 182

Query: 121  180
           
Sbjct: 236  182

Query: 181  202
           
Sbjct: 296  182

[Close]

BLAST of WMU31178 vs. TAIR10
Match: AT1G43890.1 (AT1G43890.1 RAB GTPASE HOMOLOG B18)

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-22
Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDC+KMLVGNKVDKESERAVS+++GI  A + G LFLECSAKTR NVE+CFEEL +KI
Sbjct: 116 TNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175

Query: 61  MEVPQFL-----GGKIHCCKR 120
           +E P        GGK +  K+
Sbjct: 176 LETPSLTAEGSSGGKKNIFKQ 196

Query: 121  180
           
Sbjct: 236  196

Query: 181  229
           
Sbjct: 296  196

[Close]

BLAST of WMU31178 vs. TAIR10
Match: AT4G35860.1 (AT4G35860.1 GTP-binding 2)

HSP 1 Score: 58.2 bits (139), Expect = 5.2e-09
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1


Query: 22  MLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKIME 81
           ML+GNK D   +RAVS+E+G   A + G LFLE SA+T +NVE+ F E A KI++
Sbjct: 115 MLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQ 169

Query: 82   141
           
Sbjct: 175  169

Query: 142  187
           
Sbjct: 235  169

[Close]

BLAST of WMU31178 vs. TAIR10
Match: AT3G54840.1 (AT3G54840.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-08
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 1


Query: 10  DCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 69
           D V  LVGNK D   +R V  EDG+ LA K G  F+E SAKT +N+ + FEE+  ++
Sbjct: 139 DIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRL 195

Query: 70   129
           
Sbjct: 199  195

Query: 130  181
           
Sbjct: 259  195

[Close]

BLAST of WMU31178 vs. Swiss-Prot
Match: RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+Q+CV+MLVGNKVD+ESER VSRE+GIALA +L  +FLECSA+TR+NVE+CFEELA+KI
Sbjct: 116 TNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKI 175

Query: 61  MEVPQFL 120
           MEVP  L
Sbjct: 176 MEVPSLL 182

Query: 121  180
           
Sbjct: 236  182

Query: 181  202
           
Sbjct: 296  182

[Close]

BLAST of WMU31178 vs. Swiss-Prot
Match: RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-21
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+ DC+KMLVGNKVD+ESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KI
Sbjct: 116 TNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKI 175

Query: 61  MEVPQFL 120
           MEVP  L
Sbjct: 176 MEVPSLL 182

Query: 121  180
           
Sbjct: 236  182

Query: 181  202
           
Sbjct: 296  182

[Close]

BLAST of WMU31178 vs. Swiss-Prot
Match: RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.3e-21
Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDC+KMLVGNKVDKESERAVS+++GI  A + G LFLECSAKTR NVE+CFEEL +KI
Sbjct: 116 TNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175

Query: 61  MEVPQFL-----GGKIHCCKR 120
           +E P        GGK +  K+
Sbjct: 176 LETPSLTAEGSSGGKKNIFKQ 196

Query: 121  180
           
Sbjct: 236  196

Query: 181  229
           
Sbjct: 296  196

[Close]

BLAST of WMU31178 vs. Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1


Query: 16  VKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKIMEVPQ 75
           VK+LVGNK+DKE+ R V+RE+G   A K   LF+ECSAK++  +++ FEELA KI+E+PQ
Sbjct: 114 VKLLVGNKIDKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQ 172

Query: 76   135
           
Sbjct: 174  172

Query: 136  195
           
Sbjct: 234  172

[Close]

BLAST of WMU31178 vs. Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T  D VKMLVGNK+DK++ R V R +G+  A K   LF+E SAKTR+ V+  FEEL  KI
Sbjct: 111 TRNDLVKMLVGNKIDKDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKI 170

Query: 61  MEVP 120
           ++ P
Sbjct: 171 LQTP 173

Query: 121  180
           
Sbjct: 231  173

Query: 181  193
           
Sbjct: 291  173

[Close]

BLAST of WMU31178 vs. TrEMBL
Match: A0A0A0KAL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016920 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-27
Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           TDQDCVKMLVGNKVD+ESER VSREDGIALANKLGSLF ECSAKTRENVEKCFEELAIKI
Sbjct: 114 TDQDCVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKI 173

Query: 61  MEVPQFLGGKIHCCKR 120
           MEVP FL  +    KR
Sbjct: 174 MEVPSFLEERSSLVKR 189

Query: 121  180
           
Sbjct: 234  189

Query: 181  229
           
Sbjct: 294  189

[Close]

BLAST of WMU31178 vs. TrEMBL
Match: A0A0J8BAU6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179280 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-23
Identity = 55/67 (82.09%), Postives = 64/67 (95.52%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDCVKMLVGNKVDK+SERAV+RE+G+ALA +LGSLFLECSAKTRENVE+CFEELA+KI
Sbjct: 120 TNQDCVKMLVGNKVDKDSERAVTREEGVALAQQLGSLFLECSAKTRENVEQCFEELALKI 179

Query: 61  MEVPQFL 120
           M+VP  L
Sbjct: 180 MDVPSLL 186

Query: 121  180
           
Sbjct: 240  186

Query: 181  202
           
Sbjct: 300  186

[Close]

BLAST of WMU31178 vs. TrEMBL
Match: W9RGG6_9ROSA (Ras-related protein RABC2a OS=Morus notabilis GN=L484_022582 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.2e-23
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T++DCV+MLVGNKVD+ESERAVSRE+G+ALA +LGSLFLECSAKTRENVE+CFEELA+KI
Sbjct: 117 TNKDCVRMLVGNKVDRESERAVSREEGMALAKELGSLFLECSAKTRENVEQCFEELALKI 176

Query: 61  MEVPQFLGGKIHCCKR 120
           MEVP  L    +  KR
Sbjct: 177 MEVPSLLEEGSNAVKR 192

Query: 121  180
           
Sbjct: 237  192

Query: 181  229
           
Sbjct: 297  192

[Close]

BLAST of WMU31178 vs. TrEMBL
Match: A0A0K9RA09_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089760 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.2e-23
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDCVKMLVGNKVDK+SERAV+RE+G+ALA +LGSLFLECSAKTRENVE+CFEELA+K 
Sbjct: 122 TNQDCVKMLVGNKVDKDSERAVTREEGVALAQQLGSLFLECSAKTRENVEQCFEELALKT 181

Query: 61  MEVPQFL 120
           MEVP  L
Sbjct: 182 MEVPSLL 188

Query: 121  180
           
Sbjct: 242  188

Query: 181  202
           
Sbjct: 302  188

[Close]

BLAST of WMU31178 vs. TrEMBL
Match: A0A0D2V0R8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G412800 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.4e-23
Identity = 53/67 (79.10%), Postives = 64/67 (95.52%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDCVKMLVGNKVD++SERAV+RE+G+ALA +LGS+FLECSAKTRENVE+CFEELA+KI
Sbjct: 96  TNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKI 155

Query: 61  MEVPQFL 120
           ME+P  L
Sbjct: 156 MEIPSLL 162

Query: 121  180
           
Sbjct: 216  162

Query: 181  202
           
Sbjct: 276  162

[Close]

BLAST of WMU31178 vs. NCBI nr
Match: gi|449441211|ref|XP_004138376.1| (PREDICTED: ras-related protein RABC2a-like [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 3.1e-27
Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           TDQDCVKMLVGNKVD+ESER VSREDGIALANKLGSLF ECSAKTRENVEKCFEELAIKI
Sbjct: 114 TDQDCVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKI 173

Query: 61  MEVPQFLGGKIHCCKR 120
           MEVP FL  +    KR
Sbjct: 174 MEVPSFLEERSSLVKR 189

Query: 121  180
           
Sbjct: 234  189

Query: 181  229
           
Sbjct: 294  189

[Close]

BLAST of WMU31178 vs. NCBI nr
Match: gi|659126228|ref|XP_008463077.1| (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 3.1e-27
Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           TDQDCVKMLVGNKVD+ESER VSREDGIALANKLGSLF ECSAKTRENVEKCFEELAIKI
Sbjct: 114 TDQDCVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKI 173

Query: 61  MEVPQFLGGKIHCCKR 120
           MEVP FL  +    KR
Sbjct: 174 MEVPSFLEERSSLVKR 189

Query: 121  180
           
Sbjct: 234  189

Query: 181  229
           
Sbjct: 294  189

[Close]

BLAST of WMU31178 vs. NCBI nr
Match: gi|731368753|ref|XP_010696319.1| (PREDICTED: ras-related protein RABC2a [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 55/67 (82.09%), Postives = 64/67 (95.52%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDCVKMLVGNKVDK+SERAV+RE+G+ALA +LGSLFLECSAKTRENVE+CFEELA+KI
Sbjct: 120 TNQDCVKMLVGNKVDKDSERAVTREEGVALAQQLGSLFLECSAKTRENVEQCFEELALKI 179

Query: 61  MEVPQFL 120
           M+VP  L
Sbjct: 180 MDVPSLL 186

Query: 121  180
           
Sbjct: 240  186

Query: 181  202
           
Sbjct: 300  186

[Close]

BLAST of WMU31178 vs. NCBI nr
Match: gi|703107716|ref|XP_010098817.1| (Ras-related protein RABC2a [Morus notabilis])

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-23
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T++DCV+MLVGNKVD+ESERAVSRE+G+ALA +LGSLFLECSAKTRENVE+CFEELA+KI
Sbjct: 117 TNKDCVRMLVGNKVDRESERAVSREEGMALAKELGSLFLECSAKTRENVEQCFEELALKI 176

Query: 61  MEVPQFLGGKIHCCKR 120
           MEVP  L    +  KR
Sbjct: 177 MEVPSLLEEGSNAVKR 192

Query: 121  180
           
Sbjct: 237  192

Query: 181  229
           
Sbjct: 297  192

[Close]

BLAST of WMU31178 vs. NCBI nr
Match: gi|902210112|gb|KNA16348.1| (hypothetical protein SOVF_089760 [Spinacia oleracea])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-23
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 1


Query: 1   TDQDCVKMLVGNKVDKESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKI 60
           T+QDCVKMLVGNKVDK+SERAV+RE+G+ALA +LGSLFLECSAKTRENVE+CFEELA+K 
Sbjct: 122 TNQDCVKMLVGNKVDKDSERAVTREEGVALAQQLGSLFLECSAKTRENVEQCFEELALKT 181

Query: 61  MEVPQFL 120
           MEVP  L
Sbjct: 182 MEVPSLL 188

Query: 121  180
           
Sbjct: 242  188

Query: 181  202
           
Sbjct: 302  188

The following BLAST results are available for this feature:

BLAST of WMU31178 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03530.1	5.7e-24	74.63	RAB GTPase homolog C2A	[more]
AT3G09910.1	3.1e-22	73.13	RAB GTPase homolog C2B	[more]
AT1G43890.1	4.1e-22	62.96	RAB GTPASE HOMOLOG B18	[more]
AT4G35860.1	5.2e-09	52.73	GTP-binding 2	[more]
AT3G54840.1	2.0e-08	47.37	Ras-related small GTP-binding family protein	[more]

BLAST of WMU31178 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAC2A_ARATH	1.0e-22	74.63	Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1	[more]
RAC2B_ARATH	5.6e-21	73.13	Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1	[more]
RABC1_ARATH	7.3e-21	62.96	Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1	[more]
RAB18_DICDI	1.8e-11	56.67	Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1	[more]
RB18B_DANRE	2.6e-10	53.13	Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1	[more]

BLAST of WMU31178 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL0_CUCSA	3.6e-27	85.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016920 PE=4 SV=1	[more]
A0A0J8BAU6_BETVU	2.4e-23	82.09	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179280 PE=4 S...	[more]
W9RGG6_9ROSA	3.2e-23	75.00	Ras-related protein RABC2a OS=Morus notabilis GN=L484_022582 PE=4 SV=1	[more]
A0A0K9RA09_SPIOL	4.2e-23	82.09	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089760 PE=4 SV=1	[more]
A0A0D2V0R8_GOSRA	5.4e-23	79.10	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G412800 PE=4 SV=1	[more]

BLAST of WMU31178 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441211\|ref\|XP_004138376.1\|	3.1e-27	85.53	PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]	[more]
gi\|659126228\|ref\|XP_008463077.1\|	3.1e-27	85.53	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
gi\|731368753\|ref\|XP_010696319.1\|	2.0e-23	82.09	PREDICTED: ras-related protein RABC2a [Beta vulgaris subsp. vulgaris]	[more]
gi\|703107716\|ref\|XP_010098817.1\|	2.7e-23	75.00	Ras-related protein RABC2a [Morus notabilis]	[more]
gi\|902210112\|gb\|KNA16348.1\|	3.5e-23	82.09	hypothetical protein SOVF_089760 [Spinacia oleracea]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
molecular_function	GO:0005525	GTP binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla001020	Cla001020	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S3_0070387	S3_0070387	EST
S3_0087257	S3_0087257	EST
S3_0097701	S3_0097701	EST
S3_0166690	S3_0166690	EST
S3_0182433	S3_0182433	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 3..61 score: 1.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 3..63 score: 1.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..66 score: 5.5
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 38..60 score: 2.1E-9coord: 3..16 score: 2.
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..67 score: 5.1
None	No IPR available	PANTHER	PTHR24073:SF536	RAS-RELATED PROTEIN RABC2A	coord: 2..67 score: 5.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..63 score: 3.
None	No IPR available	PROFILE	PS51419	RAB	coord: 1..102 score: 11