WMU22051 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU22051
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr3 : 13661096 .. 13666629 (-)
Sequence length	618

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGTAAAAGAGACATGAAGGGAAGTTCTTTTTCCACCGATTATTTAGAATCAACATCCACTCAAAAATGTGAGGCAGATTAGAACTGCTAGACTAGGATGTACTTCCAAAAGCAGAATGATCCAATCACAAGTGTAAAAACTGACAACCAGAGTAATATTTTATTGCTTCAGGGCGGGTTTTGACGATGAAATTCTGGCGACTGATGGGGTTCATGACCACTGGTGGACCGGCAGTACGAGGCCATGCTTGGAATTTCTTGTCAAGTTTCTTCCCACCACTCGCTGTTGGAAACAGTACTTGGGGTTGTTCCTCCAAATATTTTCTTGTCAGCAACAAGATGGTCAGAAATATACGCAACTGCAGTTGCGCCAAGCAAAGAACCTACTATGTATTTTGCTGCCATCTTCTAACGATGAAAATAGATGTACAGAATCAAGGAGCCGTCAGATTGAGCCGATTTTTGAAGCGATGAAGCTGAGAGAAAGAGAGATTGGGGAAAATGAAGAAGATGGAAGGGGAAGGAGAGATCTCAAGCAGGGCGTGCCCTAGATGTTGTGAGAGAGACGAGATTGAGTCAAGAAAGAATATGGAAGGGGAAGGAGAGAACTTAGTCACCC

Library


Library category	ESTs
watermelon fruit 10d library	1
watermelon fruit 18d library	3
watermelon fruit 26d library	6
watermelon fruit 34d library	5

Homology

[Close]

BLAST of WMU22051 vs. TAIR10
Match: AT1G01170.1 (AT1G01170.1 Protein of unknown function (DUF1138))

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 31/32 (96.88%), Postives = 30/32 (93.75%), Query Frame = -3


Query: 167 DKKFQAWPRTAGPPVVMNPISRQNFIVKTRPE 226
           D+KFQAWPRTAGPPVVMNPISRQNFIVKTRPE
Sbjct: 52  DEKFQAWPRTAGPPVVMNPISRQNFIVKTRPE 83

Query: 227  263
           
Sbjct: 112  83

HSP 2 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = -2


Query: 264 AKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           AKYI+G+L+G+  ++YI D +++D KIFGGTTP TVSN EWW  T
Sbjct: 7   AKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAAT 51

Query: 324  383
           
Sbjct: 67   51

Query: 384  399
           
Sbjct: 127  51

[Close]

BLAST of WMU22051 vs. TAIR10
Match: AT4G00860.1 (AT4G00860.1 Protein of unknown function (DUF1138))

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10
Identity = 27/36 (75.00%), Postives = 29/36 (80.56%), Query Frame = -3


Query: 167 GKKLDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPE 226
           G   +++ QAWPR AGPPVVMNPISRQNFIVK+RPE
Sbjct: 45  GAATEERLQAWPRVAGPPVVMNPISRQNFIVKSRPE 80

Query: 227  275
           
Sbjct: 105  80

HSP 2 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = -2


Query: 264 AKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           A YI+G+L G+  VAY+ D +++D K+FGGTTP T++N EW   T
Sbjct: 4   ATYIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAAT 48

Query: 324  383
           
Sbjct: 64   48

Query: 384  399
           
Sbjct: 124  48

[Close]

BLAST of WMU22051 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.3e-14
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYIVGSLLGA  VAYI DHL++DKKIFGGTTPSTVSNSEW EET
Sbjct: 1   MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.2e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = -3


Query: 164 KKLDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPEA 223
           ++ DKKFQAWPRTAGPPVVMNPISRQNFIVKTRPE+
Sbjct: 45  EETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPES 80

Query: 224  272
           
Sbjct: 105  80

HSP 2 Score: 79.3 bits (194), Expect = 5.9e-12
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MA KYI+ ++LG+ A+AY+ D L+ADKKIFGGTTPSTVSN EWWEET
Sbjct: 1   MATKYIIPAVLGSFAIAYVCDQLIADKKIFGGTTPSTVSNKEWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. TrEMBL
Match: A0A061EWV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = -3


Query: 164 KKLDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPEA 223
           ++ DKKFQAWPRTAGPPVVMNPISRQNFIVK   E+
Sbjct: 45  EETDKKFQAWPRTAGPPVVMNPISRQNFIVKAGSES 80

Query: 224  272
           
Sbjct: 105  80

HSP 2 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYI+GS++ + AVAY+ D LVAD+KIFGGTTP TVSN EWWEET
Sbjct: 1   MAAKYIIGSVVASFAVAYVIDKLVADEKIFGGTTPHTVSNKEWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. TrEMBL
Match: A0A0B0MGC6_GOSAR (Monopolar spindle 2 OS=Gossypium arboreum GN=F383_19537 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = -3


Query: 167 KKLDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPE 226
           ++ DKKFQAWPRTAGPPVVMNPISRQNFIVK+  E
Sbjct: 45  EETDKKFQAWPRTAGPPVVMNPISRQNFIVKSGSE 79

Query: 227  272
           
Sbjct: 105  79

HSP 2 Score: 77.4 bits (189), Expect = 2.2e-11
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYI+ SL G+ A+AY+SD LV+D KIFGGTTPSTVSN  WWEET
Sbjct: 1   MAAKYIIASLAGSFAIAYVSDLLVSDSKIFGGTTPSTVSNKGWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. TrEMBL
Match: A0A0D2NRU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = -3


Query: 164 KKLDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPEA 223
           ++ DKKFQAWPRTAGPPVVMNPISRQNFIVK+  E+
Sbjct: 45  EETDKKFQAWPRTAGPPVVMNPISRQNFIVKSGSES 80

Query: 224  272
           
Sbjct: 105  80

HSP 2 Score: 77.4 bits (189), Expect = 2.2e-11
Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = -2


Query: 267 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEE 326
           MAAKYI+GS+  + AVAY++D LVAD+KIFGGTTP+TVSN EWWEE
Sbjct: 1   MAAKYIIGSVAASFAVAYVADKLVADEKIFGGTTPNTVSNKEWWEE 46

Query: 327  386
           
Sbjct: 61   46

Query: 387  405
           
Sbjct: 121  46

[Close]

BLAST of WMU22051 vs. NCBI nr
Match: gi|659134221|ref|XP_008467091.1| (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYIVGSLLGATAVAYI DHL++DKKIFGGTTPSTVSNSEWWEET
Sbjct: 1   MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. NCBI nr
Match: gi|449463344|ref|XP_004149394.1| (PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 9.0e-14
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYIVGSLLGA  VAYI DHL++DKKIFGGTTPSTVSNSEW EET
Sbjct: 1   MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. NCBI nr
Match: gi|590636108|ref|XP_007028779.1| (Uncharacterized protein TCM_024708 [Theobroma cacao])

HSP 1 Score: 79.3 bits (194), Expect = 8.5e-12
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MA KYI+ ++LG+ A+AY+ D L+ADKKIFGGTTPSTVSN EWWEET
Sbjct: 1   MATKYIIPAVLGSFAIAYVCDQLIADKKIFGGTTPSTVSNKEWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. NCBI nr
Match: gi|728810096|gb|KHF99441.1| (Monopolar spindle 2 [Gossypium arboreum])

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYI+GS++ + AVAY+ D LVAD+KIFGGTTP TVSN EWWEET
Sbjct: 1   MAAKYIIGSVVASFAVAYVIDKLVADEKIFGGTTPHTVSNKEWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

[Close]

BLAST of WMU22051 vs. NCBI nr
Match: gi|823136581|ref|XP_012468054.1| (PREDICTED: uncharacterized protein LOC105786244 [Gossypium raimondii])

HSP 1 Score: 77.4 bits (189), Expect = 3.2e-11
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = -2


Query: 264 MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 323
           MAAKYI+ SL G+ A+AY+SD LV+D KIFGGTTPSTVSN  WWEET
Sbjct: 1   MAAKYIIASLAGSFAIAYVSDLLVSDSKIFGGTTPSTVSNKGWWEET 47

Query: 324  383
           
Sbjct: 61   47

Query: 384  405
           
Sbjct: 121  47

The following BLAST results are available for this feature:

BLAST of WMU22051 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01170.1	1.8e-12	96.88	Protein of unknown function (DUF1138)	[more]
AT4G00860.1	2.9e-10	75.00	Protein of unknown function (DUF1138)	[more]

BLAST of WMU22051 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYC7_CUCSA	6.3e-14	87.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1	[more]
A0A0A0KYC7_CUCSA	7.2e-10	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1	[more]
A0A061EWV8_THECC	1.5e-07	80.56	Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1	[more]
A0A0B0MGC6_GOSAR	1.5e-07	82.86	Monopolar spindle 2 OS=Gossypium arboreum GN=F383_19537 PE=4 SV=1	[more]
A0A0D2NRU0_GOSRA	1.1e-07	80.56	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1	[more]

BLAST of WMU22051 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659134221\|ref\|XP_008467091.1\|	1.5e-16	93.62	PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo]	[more]
gi\|449463344\|ref\|XP_004149394.1\|	9.0e-14	87.23	PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus]	[more]
gi\|590636108\|ref\|XP_007028779.1\|	8.5e-12	72.34	Uncharacterized protein TCM_024708 [Theobroma cacao]	[more]
gi\|728810096\|gb\|KHF99441.1\|	1.9e-11	74.47	Monopolar spindle 2 [Gossypium arboreum]	[more]
gi\|823136581\|ref\|XP_012468054.1\|	3.2e-11	74.47	PREDICTED: uncharacterized protein LOC105786244 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR009515	DUF1138

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla002670	Cla002670	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0050826	S1_0050826	EST
S2_0093875	S2_0093875	EST
S2_0121590	S2_0121590	EST
S2_0140480	S2_0140480	EST
S3_0039402	S3_0039402	EST
S3_0068689	S3_0068689	EST
S3_0077671	S3_0077671	EST
S3_0078359	S3_0078359	EST
S3_0079347	S3_0079347	EST
S3_0143145	S3_0143145	EST
S4_0029347	S4_0029347	EST
S4_0037713	S4_0037713	EST
S4_0048731	S4_0048731	EST
S4_0065703	S4_0065703	EST
S4_0176715	S4_0176715	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009515	Protein of unknown function DUF1138	PFAM	PF06592	DUF1138	coord: 3..75 score: 2.4
None	No IPR available	PANTHER	PTHR34267	FAMILY NOT NAMED	coord: 2..79 score: 2.3
None	No IPR available	PANTHER	PTHR34267:SF1	AT0ZI1 PROTEIN	coord: 2..79 score: 2.3