WMU20544 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU20544
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ferredoxin-3
Location	Chr1 : 13593583 .. 13595365 (-)
Sequence length	863

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACTGCTTTCTACCACTTTGTCCAAAACGAACCACTTCTTCTTCCTCTCTCTCTCTCTCTCTATACATACATATACATATATATATAGCCCTAATTGTCGCATCGTTCAATGAATTAGGGCTGCCTGTGATTTCGTAGCCTCGCTTTCTCCGCTGTCTCTCTCTCTCTCTCTGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCGCTGCATGTACAACGCGCCGTGTAAAAATCAGCTCAGAAGTGCCATAATCAAGTGTCCATGGTCAATTGGATCTACGAGCAACATTTCAAAATCATTTGGCTTGAAATCATGTCCCTCATTCAGAGCCTGTGCAATGGCAGTTTACAAGATTAAACTGGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACTTACCTTATTCTTGCAAGGGCAAGGCGACGTGTTACTAACGTAGCGCCGGGGAAAATGGTTTCGGGTTCAGTTGATCAGTCGGATGGGTCGTTCCTTGATGATAGTCAAATGGCAGAGGGTTTTGTTAACCTGCGTTTCATTACCAACGGCGGACTGTGTGATTCACACACATAAGGAAGGAGAACTGATCTGAGTATGATAGTGAGTTTGTGTGATAGAGTGTTTTCTTTCATGGTTTTCATTTGTAATGTCATAAAAAATAAAATTAAAAAAAAAAGAAGAAAATAAATCATGTGTGAACTCTCTTCCTGCATTATCCTTTTTATTTACTAGTAACATTATGCACGAGAAATTTTGTAGTTTTATTTAATTTTTCTTTGAACAAATGGATATTGACATTTTCATTT

Library


Library category	ESTs
watermelon fruit 10d library	2
watermelon fruit 18d library	2
watermelon fruit 26d library	2
watermelon fruit 34d library	3
Watermelon normalization and subtraction library	1

Homology

[Close]

BLAST of WMU20544 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18
Identity = 53/106 (50.00%), Postives = 66/106 (62.26%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKNQLRSAII---KCPWSIGSTSNISKSFGLK-SCPSFRACAMAV 248
           M+T ++ +  M  A  ++Q  + +I       S+GST  +S+SFGLK S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 249 YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSC+  A  TC
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTC 106

Query: 309  368
           
Sbjct: 121  106

Query: 369  428
           
Sbjct: 181  106

Query: 429  488
           
Sbjct: 241  106

HSP 2 Score: 41.6 bits (96), Expect = 9.6e-04
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   G++VSG+VDQSDGSFL+DS + +G+V
Sbjct: 99  RAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYV 133

Query: 538  583
           
Sbjct: 159  133

HSP 3 Score: 39.7 bits (91), Expect = 3.7e-03
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           +LTCV+ P +DCVIHTHKE EL
Sbjct: 133 VLTCVAYPQSDCVIHTHKETEL 154

Query: 638  644
           
Sbjct: 193  154

[Close]

BLAST of WMU20544 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 9.6e-12
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 3


Query: 183 STMSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKS--CPSFRACAMAV 242
           + +S+A + T  +  +P    LRS           ++N    FGLKS      R  AMA 
Sbjct: 4   TALSSAIVGTSFIRRSPAPISLRSL---------PSANTQSLFGLKSGTARGGRVTAMAT 63

Query: 243 YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCK 302
           YK+K + P G E E E  DD Y+LDAAEEAG+DLPYSC+
Sbjct: 64  YKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLPYSCR 92

Query: 303  362
           
Sbjct: 124  92

Query: 363  422
           
Sbjct: 184  92

Query: 423  474
           
Sbjct: 244  92

HSP 2 Score: 45.4 bits (106), Expect = 6.7e-05
Identity = 21/26 (80.77%), Postives = 21/26 (80.77%), Query Frame = 1


Query: 505 GKMVSGSVDQSDGSFLDDSQMAEGFV 564
           GK+VSGSVDQSD SFLDD Q+ EGFV
Sbjct: 101 GKVVSGSVDQSDQSFLDDEQIGEGFV 126

Query: 565  583
           
Sbjct: 161  126

HSP 3 Score: 31.2 bits (69), Expect = 1.3e+00
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGELI 637
           +LTC + PT+D  I THKE +++
Sbjct: 126 VLTCAAYPTSDVTIETHKEEDIV 148

Query: 638  647
           
Sbjct: 186  148

[Close]

BLAST of WMU20544 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 3


Query: 291 SNISKSFGLKSCPSF--RACAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 350
           +N    FGLKS  +   R  AMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 351 SCK 410
           SC+
Sbjct: 91  SCR 92

Query: 411  470
           
Sbjct: 151  92

Query: 471  474
           
Sbjct: 211  92

HSP 2 Score: 45.8 bits (107), Expect = 5.1e-05
Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 1


Query: 505 GKMVSGSVDQSDGSFLDDSQMAEGFV 564
           GK+VSGS+DQSD SFLDD QM+EG+V
Sbjct: 101 GKVVSGSIDQSDQSFLDDEQMSEGYV 126

Query: 565  583
           
Sbjct: 161  126

HSP 3 Score: 32.3 bits (72), Expect = 5.9e-01
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKE 635
           +LTCV+ PT+D VI THKE
Sbjct: 126 VLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of WMU20544 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 3


Query: 360 KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKATC 419
           K+KL+ P G+E E E ++D  IL++AE AG++LPYSC+   TC
Sbjct: 55  KVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCR-SGTC 96

Query: 420  479
           
Sbjct: 115  96

Query: 480  489
           
Sbjct: 175  96

HSP 2 Score: 38.1 bits (87), Expect = 1.1e-02
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGELI 637
           +LTC++LP  DCV++THK+ +LI
Sbjct: 126 ILTCIALPLEDCVVYTHKQSDLI 148

Query: 638  647
           
Sbjct: 186  148

HSP 3 Score: 37.0 bits (84), Expect = 2.4e-02
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 1


Query: 505 GKMVSGSVDQSDGSFLDDSQMAEGFV 564
           GK+VSG VDQS GSFL++ Q+ +G++
Sbjct: 101 GKLVSGKVDQSLGSFLEEEQIQKGYI 126

Query: 565  583
           
Sbjct: 161  126

[Close]

BLAST of WMU20544 vs. Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 53/106 (50.00%), Postives = 66/106 (62.26%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKNQLRSAII---KCPWSIGSTSNISKSFGLK-SCPSFRACAMAV 248
           M+T ++ +  M  A  ++Q  + +I       S+GST  +S+SFGLK S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 249 YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSC+  A  TC
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTC 106

Query: 309  368
           
Sbjct: 121  106

Query: 369  428
           
Sbjct: 181  106

Query: 429  488
           
Sbjct: 241  106

HSP 2 Score: 41.6 bits (96), Expect = 1.7e-02
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   G++VSG+VDQSDGSFL+DS + +G+V
Sbjct: 99  RAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYV 133

Query: 538  583
           
Sbjct: 159  133

HSP 3 Score: 39.7 bits (91), Expect = 6.5e-02
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           +LTCV+ P +DCVIHTHKE EL
Sbjct: 133 VLTCVAYPQSDCVIHTHKETEL 154

Query: 638  644
           
Sbjct: 193  154

[Close]

BLAST of WMU20544 vs. Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.6e-16
Identity = 49/103 (47.57%), Postives = 59/103 (57.28%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKN-QLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVYKI 248
           MST+   T C      +  Q     +K P S+   S ++K   LK+       AMAVYK+
Sbjct: 1   MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKV 60

Query: 249 KLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           KLV P G+EHEF+A DD YILDAAE AGV+LPYSC+  A  TC
Sbjct: 61  KLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTC 103

Query: 309  368
           
Sbjct: 121  103

Query: 369  428
           
Sbjct: 181  103

Query: 429  488
           
Sbjct: 241  103

HSP 2 Score: 44.7 bits (104), Expect = 2.0e-03
Identity = 21/35 (60.00%), Postives = 22/35 (62.86%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   GK+ SGSVDQSDGSFLDD Q  EG+V
Sbjct: 96  RAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYV 130

Query: 538  583
           
Sbjct: 156  130

HSP 3 Score: 42.7 bits (99), Expect = 7.7e-03
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           +LTCVS P +DCVIHTHKEG+L
Sbjct: 130 VLTCVSYPKSDCVIHTHKEGDL 151

Query: 638  644
           
Sbjct: 190  151

[Close]

BLAST of WMU20544 vs. Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-11
Identity = 53/122 (43.44%), Postives = 66/122 (54.10%), Query Frame = 3


Query: 180 MSTMSTAKLP---TRCMYN-----APCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSF 239
           MST +  +LP   +   Y+     AP  N L  A        G     +++ G +    F
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFA--------GHARQAARASGPRLSSRF 60

Query: 240 RACAMAV-YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGK--ATCY*R-SA 299
            A A AV +K+KLV P G EHEFEA DDTYIL+AAE AGV+LP+SC+    +TC  R SA
Sbjct: 61  VASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSA 114

Query: 300 GE 359
           GE
Sbjct: 121 GE 114

Query: 360  419
           
Sbjct: 181  114

Query: 420  479
           
Sbjct: 241  114

Query: 480  510
           
Sbjct: 301  114

HSP 2 Score: 43.1 bits (100), Expect = 5.9e-03
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1


Query: 505 GKMVSGSVDQSDGSFLDDSQMAEGFV 564
           G+M +G VDQS+GSFLDD QMAEG++
Sbjct: 108 GRMSAGEVDQSEGSFLDDGQMAEGYL 133

Query: 565  583
           
Sbjct: 168  133

HSP 3 Score: 41.6 bits (96), Expect = 1.7e-02
Identity = 17/22 (77.27%), Postives = 17/22 (77.27%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           LLTC+S P ADCVIHTHKE +L
Sbjct: 133 LLTCISYPKADCVIHTHKEEDL 154

Query: 638  644
           
Sbjct: 193  154

[Close]

BLAST of WMU20544 vs. Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11
Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 3


Query: 270 PWSIGSTSNISKS-FGLKSCPSF-RACAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEE 329
           P +    +N+ ++ FGLKS  S  R  AMA YK+ LV P GK+ E E  DD YILDAAEE
Sbjct: 23  PMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEE 82

Query: 330 AGVDLPYSCK 389
           AG+DLPYSC+
Sbjct: 83  AGIDLPYSCR 91

Query: 390  449
           
Sbjct: 143  91

Query: 450  474
           
Sbjct: 203  91

HSP 2 Score: 41.2 bits (95), Expect = 2.2e-02
Identity = 18/26 (69.23%), Postives = 20/26 (76.92%), Query Frame = 1


Query: 505 GKMVSGSVDQSDGSFLDDSQMAEGFV 564
           GK+ SGSV+Q DGSFLDD Q+ EG+V
Sbjct: 100 GKVTSGSVNQDDGSFLDDDQIKEGWV 125

Query: 565  583
           
Sbjct: 160  125

HSP 3 Score: 33.1 bits (74), Expect = 6.1e+00
Identity = 14/22 (63.64%), Postives = 14/22 (63.64%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           +LTCV+ PT D  I THKE EL
Sbjct: 125 VLTCVAYPTGDVTIETHKEEEL 146

Query: 638  644
           
Sbjct: 185  146

[Close]

BLAST of WMU20544 vs. Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.7e-11
Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 3


Query: 351 AVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 410
           AVYK+KL+ P G+E+EF+  DD YILDAAEEAGVDLPYSC+  A  TC
Sbjct: 2   AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTC 49

Query: 411  470
           
Sbjct: 62   49

Query: 471  489
           
Sbjct: 122  49

HSP 2 Score: 36.2 bits (82), Expect = 7.2e-01
Identity = 16/35 (45.71%), Postives = 19/35 (54.29%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   GK+  G VDQSDGSFL+D    +G+V
Sbjct: 42  RAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYV 76

Query: 538  583
           
Sbjct: 102  76

HSP 3 Score: 35.8 bits (81), Expect = 9.4e-01
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           +LTCV+ P +D VIHTHKE EL
Sbjct: 76  VLTCVAYPQSDLVIHTHKEEEL 97

Query: 638  644
           
Sbjct: 136  97

[Close]

BLAST of WMU20544 vs. TrEMBL
Match: A0A0A0LY90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163160 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 85/105 (80.95%), Postives = 88/105 (83.81%), Query Frame = 3


Query: 180 MSTMSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVY 239
           MSTMSTAKLPT  MYN   KNQL S IIKCP SIGST NI KSFGL S PSFRACAMA +
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 240 KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 299
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSC+  A  TC
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTC 105

Query: 300  359
           
Sbjct: 121  105

Query: 360  419
           
Sbjct: 181  105

Query: 420  479
           
Sbjct: 241  105

Query: 480  489
           
Sbjct: 301  105

[Close]

BLAST of WMU20544 vs. TrEMBL
Match: A0A0A0LY90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163160 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-03
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGELI 637
           LLTC+SLPTADCVIHTHKEGELI
Sbjct: 132 LLTCISLPTADCVIHTHKEGELI 154

Query: 638  647
           
Sbjct: 192  154

HSP 2 Score: 47.8 bits (112), Expect = 2.7e-02
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   GK+VSGSVDQSDGSFLDD QMA G++
Sbjct: 98  RAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYL 132

Query: 538  583
           
Sbjct: 158  132

HSP 3 Score: 130.6 bits (327), Expect = 3.1e-27
Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 3


Query: 180 MSTMSTAKLPTRCMYNAPCKNQLRSAI-IKCPWSIGSTSNISKSFGLKSCPSFRACAMAV 239
           M+T+ST K+ + CM+  P KNQ   A  +KCP S+GS  ++S+SFGLKS  SFR  AMA 
Sbjct: 1   MATLSTVKVSSHCMFQTPNKNQFTLATTVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAS 60

Query: 240 YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 299
           YK+KL+ P GKE+EFEASDDTYILDAAE+AGV+LPYSC+  A  TC
Sbjct: 61  YKVKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTC 106

Query: 300  359
           
Sbjct: 121  106

Query: 360  419
           
Sbjct: 181  106

Query: 420  479
           
Sbjct: 241  106

Query: 480  489
           
Sbjct: 301  106

[Close]

BLAST of WMU20544 vs. TrEMBL
Match: V7AFQ6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G094400g PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-02
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   GK+V+GSVDQSDGSFLDD+Q+ EGFV
Sbjct: 99  RAGACSTCAGKIVAGSVDQSDGSFLDDNQLKEGFV 133

Query: 538  583
           
Sbjct: 159  133

HSP 2 Score: 43.9 bits (102), Expect = 3.8e-01
Identity = 18/22 (81.82%), Postives = 20/22 (90.91%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           +LTC+S PTADCVI THKEGEL
Sbjct: 133 VLTCISYPTADCVIETHKEGEL 154

Query: 638  644
           
Sbjct: 193  154

HSP 3 Score: 129.4 bits (324), Expect = 7.0e-27
Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVYKIK 248
           MST  LPT CM+ +  +N++ SA I+ P S+GS  +ISK+FGLKS P FRA AMAVYKIK
Sbjct: 30  MSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 89

Query: 249 LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           L+ P G+EHEF+A DD YILD+AE AGV+LPYSC+  A  TC
Sbjct: 90  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTC 131

Query: 309  368
           
Sbjct: 150  131

Query: 369  428
           
Sbjct: 210  131

Query: 429  488
           
Sbjct: 270  131

[Close]

BLAST of WMU20544 vs. TrEMBL
Match: F6HHG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00410 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.7e-02
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   G+MVSGSVDQSDGSFLDD QM +G++
Sbjct: 124 RAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGYL 158

Query: 538  583
           
Sbjct: 184  158

HSP 2 Score: 45.8 bits (107), Expect = 1.0e-01
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           LLTC+S PT+DCVIHTHKEG+L
Sbjct: 158 LLTCISYPTSDCVIHTHKEGDL 179

Query: 638  644
           
Sbjct: 218  179

HSP 3 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVYKIK 248
           MST  LPT CM+ +  +N + SA I+ P S+GS  +ISK+FGLKS P FRA AMAVYKIK
Sbjct: 1   MSTVNLPTHCMFRSATQNXIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 60

Query: 249 LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           L+ P G+EHEF+A DD YILD+AE AGV+LPYSC+  A  TC
Sbjct: 61  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTC 102

Query: 309  368
           
Sbjct: 121  102

Query: 369  428
           
Sbjct: 181  102

Query: 429  488
           
Sbjct: 241  102

[Close]

BLAST of WMU20544 vs. TrEMBL
Match: A5B3C7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038770 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.7e-02
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1


Query: 478 RRRVTNVAPGKMVSGSVDQSDGSFLDDSQMAEGFV 537
           R    +   G+MVSGSVDQSDGSFLDD QM +G++
Sbjct: 95  RAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGYL 129

Query: 538  583
           
Sbjct: 155  129

HSP 2 Score: 45.8 bits (107), Expect = 1.0e-01
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 2


Query: 578 LLTCVSLPTADCVIHTHKEGEL 637
           LLTC+S PT+DCVIHTHKEG+L
Sbjct: 129 LLTCISYPTSDCVIHTHKEGDL 150

Query: 638  644
           
Sbjct: 189  150

HSP 3 Score: 127.1 bits (318), Expect = 3.4e-26
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 3


Query: 180 MSTMSTAKLPTRCMYNAPCKNQLR-SAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAV 239
           M+T+ST  L   CM+  P KNQ   S  +KCP S+GS  ++S+SFGLKS  SFR  AMA 
Sbjct: 1   MATLSTVNLSPHCMFQTPSKNQSTISTTVKCPSSLGSVRSVSRSFGLKSSSSFRVTAMAS 60

Query: 240 YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 299
           YK+KL+ P GKE+EFEA+DDTYILDAAE AG++LPYSC+  A  TC
Sbjct: 61  YKVKLIGPDGKENEFEAADDTYILDAAENAGIELPYSCRAGACSTC 106

Query: 300  359
           
Sbjct: 121  106

Query: 360  419
           
Sbjct: 181  106

Query: 420  479
           
Sbjct: 241  106

Query: 480  489
           
Sbjct: 301  106

[Close]

BLAST of WMU20544 vs. NCBI nr
Match: gi|700209835|gb|KGN64931.1| (hypothetical protein Csa_1G163160 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38
Identity = 85/105 (80.95%), Postives = 88/105 (83.81%), Query Frame = 3


Query: 180 MSTMSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVY 239
           MSTMSTAKLPT  MYN   KNQL S IIKCP SIGST NI KSFGL S PSFRACAMA +
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 240 KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 299
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSC+  A  TC
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTC 105

Query: 300  359
           
Sbjct: 121  105

Query: 360  419
           
Sbjct: 181  105

Query: 420  479
           
Sbjct: 241  105

Query: 480  489
           
Sbjct: 301  105

[Close]

BLAST of WMU20544 vs. NCBI nr
Match: gi|659071691|ref|XP_008461439.1| (PREDICTED: ferredoxin, root R-B2 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 86/105 (81.90%), Postives = 88/105 (83.81%), Query Frame = 3


Query: 180 MSTMSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVY 239
           MSTMSTAKLPT  MYN   KNQL S IIKCP SIGST NI KSFGL S PSFRA AMAV+
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 240 KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 299
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSC+  A  TC
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTC 105

Query: 300  359
           
Sbjct: 121  105

Query: 360  419
           
Sbjct: 181  105

Query: 420  479
           
Sbjct: 241  105

Query: 480  489
           
Sbjct: 301  105

[Close]

BLAST of WMU20544 vs. NCBI nr
Match: gi|593203955|ref|XP_007132438.1| (hypothetical protein PHAVU_011G094400g [Phaseolus vulgaris])

HSP 1 Score: 131.0 bits (328), Expect = 3.4e-27
Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 3


Query: 180 MSTMSTAKLPTRCMYNAPCKNQLRSAI-IKCPWSIGSTSNISKSFGLKSCPSFRACAMAV 239
           M+T+ST K+ + CM+  P KNQ   A  +KCP S+GS  ++S+SFGLKS  SFR  AMA 
Sbjct: 1   MATLSTVKVSSHCMFQTPNKNQFTLATTVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAS 60

Query: 240 YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 299
           YK+KL+ P GKE+EFEASDDTYILDAAE+AGV+LPYSC+  A  TC
Sbjct: 61  YKVKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTC 106

Query: 300  359
           
Sbjct: 121  106

Query: 360  419
           
Sbjct: 181  106

Query: 420  479
           
Sbjct: 241  106

Query: 480  489
           
Sbjct: 301  106

[Close]

BLAST of WMU20544 vs. NCBI nr
Match: gi|731394574|ref|XP_010651884.1| (PREDICTED: ferredoxin-3, chloroplastic [Vitis vinifera])

HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27
Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVYKIK 248
           MST  LPT CM+ +  +N++ SA I+ P S+GS  +ISK+FGLKS P FRA AMAVYKIK
Sbjct: 46  MSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 105

Query: 249 LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           L+ P G+EHEF+A DD YILD+AE AGV+LPYSC+  A  TC
Sbjct: 106 LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTC 147

Query: 309  368
           
Sbjct: 166  147

Query: 369  428
           
Sbjct: 226  147

Query: 429  488
           
Sbjct: 286  147

[Close]

BLAST of WMU20544 vs. NCBI nr
Match: gi|147819070|emb|CAN74125.1| (hypothetical protein VITISV_038770 [Vitis vinifera])

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 3


Query: 189 MSTAKLPTRCMYNAPCKNQLRSAIIKCPWSIGSTSNISKSFGLKSCPSFRACAMAVYKIK 248
           MST  LPT CM+ +  +N + SA I+ P S+GS  +ISK+FGLKS P FRA AMAVYKIK
Sbjct: 1   MSTVNLPTHCMFRSATQNXIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 60

Query: 249 LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCKGKA--TC 308
           L+ P G+EHEF+A DD YILD+AE AGV+LPYSC+  A  TC
Sbjct: 61  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTC 102

Query: 309  368
           
Sbjct: 121  102

Query: 369  428
           
Sbjct: 181  102

Query: 429  488
           
Sbjct: 241  102

The following BLAST results are available for this feature:

BLAST of WMU20544 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27510.1	1.8e-18	50.00	ferredoxin 3	[more]
AT1G60950.1	9.6e-12	42.42	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G10960.1	6.2e-11	53.97	ferredoxin 1	[more]
AT5G10000.1	2.1e-06	51.16	ferredoxin 4	[more]

BLAST of WMU20544 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FER3_ARATH	3.2e-17	50.00	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1	[more]
FER3_MAIZE	3.6e-16	47.57	Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1	[more]
FER6_MAIZE	2.6e-11	43.44	Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1	[more]
FER1_MESCR	4.5e-11	55.71	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1	[more]
FER1_RAPSA	7.7e-11	68.75	Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1	[more]

BLAST of WMU20544 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY90_CUCSA	1.8e-38	80.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163160 PE=4 SV=1	[more]
A0A0A0LY90_CUCSA	1.8e-03	95.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163160 PE=4 SV=1	[more]
V7AFQ6_PHAVU	2.0e-02	62.86	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G094400g PE=4 SV=1	[more]
F6HHG1_VITVI	7.7e-02	60.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00410 PE=4 SV=...	[more]
A5B3C7_VITVI	7.7e-02	60.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038770 PE=4 SV=1	[more]

BLAST of WMU20544 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209835\|gb\|KGN64931.1\|	1.9e-38	80.95	hypothetical protein Csa_1G163160 [Cucumis sativus]	[more]
gi\|659071691\|ref\|XP_008461439.1\|	1.6e-37	81.90	PREDICTED: ferredoxin, root R-B2 [Cucumis melo]	[more]
gi\|593203955\|ref\|XP_007132438.1\|	3.4e-27	61.32	hypothetical protein PHAVU_011G094400g [Phaseolus vulgaris]	[more]
gi\|731394574\|ref\|XP_010651884.1\|	7.6e-27	61.76	PREDICTED: ferredoxin-3, chloroplastic [Vitis vinifera]	[more]
gi\|147819070\|emb\|CAN74125.1\|	1.3e-26	61.76	hypothetical protein VITISV_038770 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0051536	iron-sulfur cluster binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla001097	Cla001097	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0107863	S1_0107863	EST
S1_0149538	S1_0149538	EST
S2_0079348	S2_0079348	EST
S2_0123959	S2_0123959	EST
S3_0067594	S3_0067594	EST
S3_0166754	S3_0166754	EST
S4_0122224	S4_0122224	EST
S4_0132213	S4_0132213	EST
S4_0132509	S4_0132509	EST
WMN07B08	WMN07B08	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..103 score: 2.
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	unknown	SSF54292	2Fe-2S ferredoxin-like	coord: 59..103 score: 8.45
IPR012675	Beta-grasp domain	GENE3D	G3DSA:3.10.20.30		coord: 58..103 score: 1.4
None	No IPR available	PANTHER	PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	coord: 4..97 score: 3.6
None	No IPR available	PANTHER	PTHR19370:SF127	SUBFAMILY NOT NAMED	coord: 4..97 score: 3.6