WMU13438 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU13438
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr8 : 20095016 .. 20097025 (-)
Sequence length537
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GTTCAACCGACCATCAGCCGTCAAACCCGGTATCTTGAGCCAAGAAAAAGAAAGGGTAGAGCACCCGACGGGGATTGATTGCGTGGCTGACTTCTTGTGCAACCGAGCTCTTCTAATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTGGAGTATCCTCTTTCTCAGTAGGGATTATCTCGATCTATTCATACTACGCCCGATCCTTGCAGTTGTGTTCACTTTTCTCCTTGATTTCTCTCGGTTGGTTTTTGGCGTTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAAATTTTTTGGTTTGCGTAAGAAACCCGTCAAGCCGAAGCCTCCGACGCGCCGGTTATCGAAGTTTTTATGATAGTCTGAATTCCCAAACTTCAGCTTCCGGCTGATGTATGTTTTGAGCTTGGAGGCCATTCTTAACTGAATTGCAGAACGTAGCCCAAGAGAAAGAAGCAGTACTGGCCAATTGTTTGTGAGGACAGAGTGAAAAGGTCCCGTCTCAAGCTACGAGATGTGTATAGCTCGT
Homology
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BLAST of WMU13438 vs. NCBI nr
Match: gi|659089174|ref|XP_008445365.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-06
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 2 

Query: 203 PCSCVHFSP*FLSVG-FWRWKLVLVHVPLVQENFLVCVRNPSSRSLRRAGYRSFYDSLNS 262
           P   + F+   +S+G F  WKLVLVHVPLVQE F +  +   S+   R     FYDSLNS
Sbjct: 28  PILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR-LSKFYDSLNS 87

Query: 263 QTSASG-*CMF--*AWRPFLTELQNVAQEKEA 322
           QTSASG  C++   +    L ELQN+   KE+
Sbjct: 88  QTSASGWFCVYRCLSLEAILNELQNLKLGKES 118

Query: 323  382
           
Sbjct: 148  118

Query: 383  442
           
Sbjct: 208  118

Query: 443  467
           
Sbjct: 268  118

The following BLAST results are available for this feature:
BLAST of WMU13438 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089174|ref|XP_008445365.1|2.7e-0645.65PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla022071Cla022071gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0169687S2_0169687EST
S4_0076012S4_0076012EST