WMU12086 (transcribed_cluster) Watermelon (97103) v1

NameWMU12086
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr2 : 7137183 .. 7139764 (-)
Sequence length295
The following sequences are available for this feature:

transcribed_cluster sequence

ATGGCTGTGTTTAATCCCTTTTGTAAATTTCTAAGTTACTAAAGCGACCACTAGCGATCTTTGACAAGTACGGCAGAAGGTACCATGAGACAGCTTCGCAAAAAGCCCTAACATTAACAAGTGAGGTGGGATGTCAGGCAGGAAGCCGCTGTCATGCTGTAAATTGGCAAAAATGATTGTACGCATCCCAGTTCTCCCAAGCTCCCGGAAGCAGCAGAGAAATGGTGGCCCCGGCAAGGCGGCGAGGACCAGTTGAGCGGCGGCGGGCGGAGTTTGAGGAGCCGATGAAGTTAAC
BLAST of WMU12086 vs. TAIR10
Match: AT2G15000.4 (AT2G15000.4 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.2e-07
Identity = 26/42 (61.90%), Postives = 28/42 (66.67%), Query Frame = -3

Query: 123 SSPPCRGHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHL 182
           SS P R   FS+ S +LG LGC QSFLP+YS+ A S LTSHL
Sbjct: 38  SSLPSRRFTFSSPSRNLGALGCTQSFLPLYSVVATSQLTSHL 79

Query: 183 242
           
Sbjct: 98  79

Query: 243 249
           
Sbjct: 158 79

BLAST of WMU12086 vs. TrEMBL
Match: A0A0A0K4J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071630 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 120 GHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHLT 179
           G HFSAAS SLGELGCVQSFLPIYSMTAASCLTSHLT
Sbjct: 103 GRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLT 139

Query: 180 231
           
Sbjct: 163 139

BLAST of WMU12086 vs. NCBI nr
Match: gi|700188641|gb|KGN43874.1| (hypothetical protein Csa_7G071630 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 120 GHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHLT 179
           G HFSAAS SLGELGCVQSFLPIYSMTAASCLTSHLT
Sbjct: 103 GRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLT 139

Query: 180 231
           
Sbjct: 163 139

BLAST of WMU12086 vs. NCBI nr
Match: gi|659110024|ref|XP_008455008.1| (PREDICTED: uncharacterized protein LOC103495285 isoform X2 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 120 GHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHLT 179
           G HFSAAS SLGELGCVQSFLPIYSMTAASCLTSHLT
Sbjct: 42  GRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLT 78

Query: 180 231
           
Sbjct: 102 78

BLAST of WMU12086 vs. NCBI nr
Match: gi|449438351|ref|XP_004136952.1| (PREDICTED: uncharacterized protein LOC101219067 isoform X1 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 120 GHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHLT 179
           G HFSAAS SLGELGCVQSFLPIYSMTAASCLTSHLT
Sbjct: 45  GRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLT 81

Query: 180 231
           
Sbjct: 105 81

BLAST of WMU12086 vs. NCBI nr
Match: gi|659110022|ref|XP_008455007.1| (PREDICTED: uncharacterized protein LOC103495285 isoform X1 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 120 GHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHLT 179
           G HFSAAS SLGELGCVQSFLPIYSMTAASCLTSHLT
Sbjct: 42  GRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLT 78

Query: 180 231
           
Sbjct: 102 78

BLAST of WMU12086 vs. NCBI nr
Match: gi|449438353|ref|XP_004136953.1| (PREDICTED: uncharacterized protein LOC101219067 isoform X2 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 120 GHHFSAASGSLGELGCVQSFLPIYSMTAASCLTSHLT 179
           G HFSAAS SLGELGCVQSFLPIYSMTAASCLTSHLT
Sbjct: 45  GRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLT 81

Query: 180 231
           
Sbjct: 105 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G15000.43.2e-0761.90 unknown protein[more]
Match NameE-valueIdentityDescription
A0A0A0K4J1_CUCSA2.0e-1094.59Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071630 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700188641|gb|KGN43874.1|2.9e-1094.59hypothetical protein Csa_7G071630 [Cucumis sativus][more]
gi|659110024|ref|XP_008455008.1|2.9e-1094.59PREDICTED: uncharacterized protein LOC103495285 isoform X2 [Cucumis melo][more]
gi|449438351|ref|XP_004136952.1|2.9e-1094.59PREDICTED: uncharacterized protein LOC101219067 isoform X1 [Cucumis sativus][more]
gi|659110022|ref|XP_008455007.1|2.9e-1094.59PREDICTED: uncharacterized protein LOC103495285 isoform X1 [Cucumis melo][more]
gi|449438353|ref|XP_004136953.1|2.9e-1094.59PREDICTED: uncharacterized protein LOC101219067 isoform X2 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla016072Cla016072gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0085894S2_0085894EST
S2_0149366S2_0149366EST