WMU11266 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU11266
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRPM1-interacting protein 4-like protein
LocationChr2 : 10285465 .. 10287451 (+)
Sequence length388
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CTTTACCTTCATCAACATCATCATCATCATCATCACCATCATCATCATATTCTTCTTCTCAAAACCTCACTCATGGCGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTAAAATAGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCGGTTCGATAAATGGGGTTCGAGCAGAAATAGTATAATACTGCAAATTACTTCAACAACACGAGTGAAGCTGTATT
Homology
[Close]
BLAST of WMU11266 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 70.5 bits (171), Expect = 8.7e-13
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEK+
Sbjct: 1   MADKGR--PLPKFGEWDVNDPSSAEGFTVIFNKARNEKK 37

Query: 133  190
           
Sbjct: 61   37


HSP 2 Score: 33.1 bits (74), Expect = 1.5e-01
Identity = 17/30 (56.67%), Postives = 18/30 (60.00%), Query Frame = 3 

Query: 183 EKTGGMPDSPAKDDPTY-KNGSVLGKSQPK 242
           +K GG  DSP KD+P Y KNG VL K   K
Sbjct: 36  KKGGGKSDSPGKDEPGYNKNGEVLEKPAKK 65

Query: 243  270
           
Sbjct: 96   65

[Close]
BLAST of WMU11266 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 1 

Query: 97  PLPKFGEWDVNDPASAEGFTVIFNKARNEKR 156
           PLPKFGEWDVNDPASAEGFTVIFNKAR+EK+
Sbjct: 23  PLPKFGEWDVNDPASAEGFTVIFNKARDEKK 53

Query: 157  190
           
Sbjct: 83   53

[Close]
BLAST of WMU11266 vs. TAIR10
Match: AT4G35655.1 (AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +K+
Sbjct: 1   MASNSDARPLPKFGEWDVNDPATAEGFTVIFSKAGEDKK 39

Query: 133  190
           
Sbjct: 61   39

[Close]
BLAST of WMU11266 vs. TAIR10
Match: AT5G40645.1 (AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.4e-10
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 1 

Query: 97  PLPKFGEWDVNDPASAEGFTVIFNKARNEKR 156
           PLPKFGEWDVNDPASAEGFTVIF KAR++K+
Sbjct: 14  PLPKFGEWDVNDPASAEGFTVIFAKARDDKK 44

Query: 157  190
           
Sbjct: 74   44

[Close]
BLAST of WMU11266 vs. TAIR10
Match: AT5G63270.1 (AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-10
Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAE     PLPKFGEWDVN+PASAEGFTVIF+KA +EK+
Sbjct: 1   MAEN-KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKK 38

Query: 133  190
           
Sbjct: 61   38

[Close]
BLAST of WMU11266 vs. TrEMBL
Match: A0A0A0KCQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113510 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-13
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 1   MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK 39

Query: 133  190
           
Sbjct: 61   39

[Close]
BLAST of WMU11266 vs. TrEMBL
Match: A0A0A0KCQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113510 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-05
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 3 

Query: 183 EKTGGMPDSPAKDDPTYKNGSVLGKSQPKIGFAACKLQNREA 242
           +KTGGMPDSPAKD+  +KNGSVLGKSQPK  F  C LQ  E+
Sbjct: 38  KKTGGMPDSPAKDETAFKNGSVLGKSQPKKWF--CCLQAAES 77

Query: 243  302
           
Sbjct: 98   77

Query: 303  309
           
Sbjct: 158  77


HSP 2 Score: 73.2 bits (178), Expect = 2.7e-10
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 1   MAEKGG--PLPKFGEWDVNDPASAEGFTVIFNKARNEKK 37

Query: 133  190
           
Sbjct: 61   37

[Close]
BLAST of WMU11266 vs. TrEMBL
Match: A0A067E6W9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040492mg PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-01
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 3 

Query: 168 *SQE*EKTGGMPDSPAKDDPTYKNGSVLGKSQPKIGFAACKLQNREA 227
            ++  +KTGG PDSP KDD  +K+G+VLGK Q K  F   +    E+
Sbjct: 31  KARNEKKTGGKPDSPVKDDSQFKHGAVLGKPQSKKWFCCMQAARAES 77

Query: 228  287
           
Sbjct: 91   77

Query: 288  309
           
Sbjct: 151  77


HSP 2 Score: 73.2 bits (178), Expect = 2.7e-10
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 1   MAEKGG--PLPKFGEWDVNDPASAEGFTVIFNKARNEKK 37

Query: 133  190
           
Sbjct: 61   37

[Close]
BLAST of WMU11266 vs. TrEMBL
Match: V4UFJ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018013mg PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-01
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 3 

Query: 168 *SQE*EKTGGMPDSPAKDDPTYKNGSVLGKSQPKIGFAACKLQNREA 227
            ++  +KTGG PDSP KDD  +K+G+VLGK Q K  F   +    E+
Sbjct: 31  KARNEKKTGGKPDSPVKDDSQFKHGAVLGKPQSKKWFCCMQAARAES 77

Query: 228  287
           
Sbjct: 91   77

Query: 288  309
           
Sbjct: 151  77


HSP 2 Score: 73.2 bits (178), Expect = 2.7e-10
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 1   MAEKGQ--PLPKFGEWDVNDPASAEGFTVIFNKARNEKK 37

Query: 133  190
           
Sbjct: 61   37

[Close]
BLAST of WMU11266 vs. TrEMBL
Match: A0A067K144_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18520 PE=4 SV=1)

HSP 1 Score: 37.0 bits (84), Expect = 2.1e+01
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 3 

Query: 183 EKTGGMPDSPAKDDPTYKNGS-VLGKSQPKIGFAA 242
           +KTGG PDSPA+D+ ++K GS  LGK Q    + A
Sbjct: 36  KKTGGKPDSPARDNSSFKPGSNTLGKPQSPFKYLA 70

Query: 243  285
           
Sbjct: 96   70


HSP 2 Score: 72.4 bits (176), Expect = 4.5e-10
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 1 

Query: 64  TSLMAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 123
           +SL+ ++   SPLPKFGEWDVNDPASAEGFTVIFNKAR+EK+
Sbjct: 67  SSLVRDREKGSPLPKFGEWDVNDPASAEGFTVIFNKARDEKK 108

Query: 124  183
           
Sbjct: 127  108

Query: 184  190
           
Sbjct: 187  108

[Close]
BLAST of WMU11266 vs. NCBI nr
Match: gi|659128325|ref|XP_008464154.1| (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-13
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 1   MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK 39

Query: 133  190
           
Sbjct: 61   39

[Close]
BLAST of WMU11266 vs. NCBI nr
Match: gi|659128323|ref|XP_008464153.1| (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-12
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1 

Query: 79  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 138
           EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 4   EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK 40

Query: 139  190
           
Sbjct: 64   40

[Close]
BLAST of WMU11266 vs. NCBI nr
Match: gi|747076664|ref|XP_011085412.1| (PREDICTED: RPM1-interacting protein 4 isoform X2 [Sesamum indicum])

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-10
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEKR
Sbjct: 1   MAEKGL--PLPKFGEWDVNDPASAEGFTVIFNKARNEKR 37

Query: 133  190
           
Sbjct: 61   37

[Close]
BLAST of WMU11266 vs. NCBI nr
Match: gi|747076662|ref|XP_011085411.1| (PREDICTED: RPM1-interacting protein 4 isoform X1 [Sesamum indicum])

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-10
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEKR
Sbjct: 1   MAEKGL--PLPKFGEWDVNDPASAEGFTVIFNKARNEKR 37

Query: 133  190
           
Sbjct: 61   37

[Close]
BLAST of WMU11266 vs. NCBI nr
Match: gi|643718852|gb|KDP29951.1| (hypothetical protein JCGZ_18520 [Jatropha curcas])

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 73  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKR 132
           MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEK+
Sbjct: 1   MAEKGQ--PLPKFGEWDVNDPASAEGFTVIFNKARNEKK 37

Query: 133  190
           
Sbjct: 61   37

The following BLAST results are available for this feature:
BLAST of WMU11266 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04410.18.7e-1384.62 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G55850.21.3e-1193.55 RPM1-interacting protein 4 (RIN4) family protein[more]
AT4G35655.11.8e-1069.23 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G40645.12.4e-1087.10 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G63270.15.3e-1074.36 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of WMU11266 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCQ1_CUCSA3.4e-1397.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113510 PE=4 SV=1[more]
A0A0A0KCQ1_CUCSA1.1e-0569.05Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113510 PE=4 SV=1[more]
A0A067E6W9_CITSI1.7e-0144.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040492mg PE=4 SV=1[more]
V4UFJ1_9ROSI1.7e-0144.68Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018013mg PE=4 SV=1[more]
A0A067K144_JATCU2.1e+0151.43Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18520 PE=4 SV=1[more]
BLAST of WMU11266 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128325|ref|XP_008464154.1|2.8e-1397.44PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo][more]
gi|659128323|ref|XP_008464153.1|3.1e-1297.30PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo][more]
gi|747076664|ref|XP_011085412.1|1.7e-1092.31PREDICTED: RPM1-interacting protein 4 isoform X2 [Sesamum indicum][more]
gi|747076662|ref|XP_011085411.1|1.7e-1092.31PREDICTED: RPM1-interacting protein 4 isoform X1 [Sesamum indicum][more]
gi|643718852|gb|KDP29951.1|2.2e-1089.74hypothetical protein JCGZ_18520 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla010435Cla010435gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0006889S2_0006889EST
S2_0039764S2_0039764EST
S2_0079011S2_0079011EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 7..40
score: 9.0
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..67
score: 2.7