WMU09234 (transcribed_cluster) Watermelon (97103) v1
The following sequences are available for this feature:
ATTCTCTTTTTCAACAACCCACACTCTCTCTCTGCGTTTTGCATAAGCCGAACAGCCTCCCACCGCACAACCTTCTCATCCCGTCACCTGTTCAGCTTCTTCTCCGGCGGAAACTGCGGCGCAGTTACGTCCAAAATCGAGAGCAGTGTCCTCCACGACCAGTGACGTGTTTCTGACGGGCGACTCTCAGTTCTCGGTGTTCCAGCAGCTCCTTTTAGCGTTTTCATCCTTTTCGTTTAATAGAGCAGCTATGGAGCATCAGATTGCTGGGGTTCGCTGCCAGAGAATTGGCTGCAATGCCTCGTTCACTGAGGACGACAATCCTGAAGGTTCTTGTCAATACCATGACTCGGTAGGTTAACACACTCACACTCTTATTCTCCTATCAACTCCAACAAACTTAAAATTAAGGATCGATGTTCAGTTTCAAATTTATTAAACTATCCCTAGTGGGGAATATGTTCATAATGGAAATCAATGAAGATGAATTAGTTTAG
BLAST of WMU09234 vs. TAIR10
Match: AT5G51700.1 (AT5G51700.1 protein binding;zinc ion binding) HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2
BLAST of WMU09234 vs. Swiss-Prot
Match: RAR1_ORYSJ (Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp. japonica GN=RAR1 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06 Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 2
BLAST of WMU09234 vs. Swiss-Prot
Match: RAR1_ARATH (Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana GN=RAR1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2
BLAST of WMU09234 vs. TrEMBL
Match: B9R9M1_RICCO (Rar1, putative OS=Ricinus communis GN=RCOM_1498650 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 9.3e-08 Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 2
BLAST of WMU09234 vs. TrEMBL
Match: A0A061G0A5_THECC (Binding,zinc ion binding isoform 1 OS=Theobroma cacao GN=TCM_015010 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-06 Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 2
BLAST of WMU09234 vs. TrEMBL
Match: G8XUU9_9ROSA (Rar OS=Malus hupehensis PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06 Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 2
BLAST of WMU09234 vs. TrEMBL
Match: G8XUU9_9ROSA (Rar OS=Malus hupehensis PE=2 SV=1) HSP 1 Score: 32.0 bits (71), Expect = 8.7e+02 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 2
HSP 2 Score: 60.1 bits (144), Expect = 3.0e-06 Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 2
BLAST of WMU09234 vs. TrEMBL
Match: Q32ZJ5_SOLTU (RAR1-like protein (Fragment) OS=Solanum tuberosum PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.0e-06 Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 2
BLAST of WMU09234 vs. NCBI nr
Match: gi|778668194|ref|XP_011649053.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09 Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 2
BLAST of WMU09234 vs. NCBI nr
Match: gi|449442307|ref|XP_004138923.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09 Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 2
BLAST of WMU09234 vs. NCBI nr
Match: gi|255539663|ref|XP_002510896.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 [Ricinus communis]) HSP 1 Score: 65.9 bits (159), Expect = 7.8e-08 Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 2
BLAST of WMU09234 vs. NCBI nr
Match: gi|1009122162|ref|XP_015877853.1| (PREDICTED: LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 [Ziziphus jujuba]) HSP 1 Score: 62.4 bits (150), Expect = 8.6e-07 Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 2
BLAST of WMU09234 vs. NCBI nr
Match: gi|971538327|ref|XP_015158654.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Solanum tuberosum]) HSP 1 Score: 62.4 bits (150), Expect = 8.6e-07 Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 2
The following BLAST results are available for this feature:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
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