WMU06305 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU06305
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr9 : 32942772 .. 32943153 (-)
Sequence length379
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GGAGGAGTTTTAATGTCACATTTGGAAGGCAAAGCCAAAGCATTGGTTATATTAATCCCAATGGATGGGAGGATTGATTTGAAGTTGCACAAACACTTGAGATCGGCACGACGAAGCACCGAACAACAACCTTTAGTTGGTGGTTGCAATGGTTTTCCATGCCAAGGAGCCACTGCTGGTTGACACACACCAGGCTCCTTCGTGTCAATCTTACACAAAGGGTTGGTGCTAGTACCTGCCAGAAGCATGGCTAAGAGTAACAATCTTAAAAATAATGGCACCAAAAACTTGTTAGTTGTCATCAACATTGTTCACAAAAAAATAAAATAAAATTAGAAATTAAGTATAAGTTTGAAGTCATGATCAAAAGATGGTGGGC
Homology
[Close]
BLAST of WMU06305 vs. TAIR10
Match: AT5G55450.1 (AT5G55450.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = -3 

Query: 3   STNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGIN 62
           ++ P+C IDT +   C+PAV    G    PP   CC+V R A+L+CLC +K  LP++GI+
Sbjct: 29  TSIPVCNIDTNDLAKCRPAVT---GNNPPPPGPDCCAVARVANLQCLCPYKPYLPTVGID 88

Query: 63  ITNALALPSKCDIKTP 122
            +    L + C + +P
Sbjct: 89  PSRVRPLLANCGVNSP 101

Query: 123  182
           
Sbjct: 149  101

Query: 183  231
           
Sbjct: 209  101

[Close]
BLAST of WMU06305 vs. TAIR10
Match: AT5G55410.2 (AT5G55410.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-09
Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = -3 

Query: 6   LCKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGINITNA 65
           +C +D  +   C+PA+    G    PP   CC V+R+A+ +CLC FK  LP + I+ +  
Sbjct: 33  ICDMDINDMQKCRPAIT---GNNPPPPVNDCCVVVRKANFECLCRFKFYLPILRIDPSKV 92

Query: 66  LALPSKCDIKT 125
           +AL +KC + T
Sbjct: 93  VALVAKCGVTT 100

Query: 126  185
           
Sbjct: 153  100

Query: 186  219
           
Sbjct: 213  100

[Close]
BLAST of WMU06305 vs. TAIR10
Match: AT5G55460.1 (AT5G55460.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = -3 

Query: 6   CKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGINITNAL 65
           C I+      C+PAV    G     P K CC +L+ A+LKC+C FKS+LP + +  +   
Sbjct: 33  CNINANHLEKCRPAVI---GDNPPSPIKECCELLQAANLKCICRFKSVLPVLAVYPSKVQ 92

Query: 66  ALPSKCDIKT 125
           AL SKC + T
Sbjct: 93  ALLSKCGLTT 99

Query: 126  185
           
Sbjct: 153  99

Query: 186  216
           
Sbjct: 213  99

[Close]
BLAST of WMU06305 vs. TrEMBL
Match: A0A0A0LBB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G759990 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-26
Identity = 63/102 (61.76%), Postives = 70/102 (68.63%), Query Frame = -3 

Query: 3   MLMTTNKFXXXXXXXXXXXXXXXAGTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKG 62
           M++T NK                A T+   LCK+DTKE  VC+PAVAP HGKPLQPPT+ 
Sbjct: 1   MILTNNKSSVALFLRLLFLVMVLAETTATLLCKVDTKELCVCRPAVAPLHGKPLQPPTER 60

Query: 63  CCSVLRRADLKCLCNFKSILPSIGINITNALALPSKCDIKTP 122
           CCSVLR ADLKCLCN KSILPS GIN T ALALPSKC I +P
Sbjct: 61  CCSVLRSADLKCLCNLKSILPSAGINATIALALPSKCGIPSP 102

Query: 123  182
           
Sbjct: 121  102

Query: 183  242
           
Sbjct: 181  102

Query: 243  302
           
Sbjct: 241  102

Query: 303  309
           
Sbjct: 301  102

[Close]
BLAST of WMU06305 vs. TrEMBL
Match: A0A0A0LAS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G760500 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = -3 

Query: 3   AGTSTNPLCKIDTKEPGVCQPAVAPW-HGKPLQPPTKGCCSVLRRADLKCLCNFKSILPS 62
           A  +  PLCKIDT +  +C+ AV P  HG+PL  PT+ CCSV+R ADLKCLCN KS+LPS
Sbjct: 19  AAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSVLPS 78

Query: 63  IGINITNALALPSKCDIKTP 122
           +GI+  NALALPSKC++ +P
Sbjct: 79  MGIDTANALALPSKCNVASP 98

Query: 123  182
           
Sbjct: 139  98

Query: 183  240
           
Sbjct: 199  98

[Close]
BLAST of WMU06305 vs. TrEMBL
Match: K7MTB4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G191800 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-13
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = -3 

Query: 3   GTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIG 62
           G     +C ID+ +  +C+ AV    G+   PP + CC+V+R+A+L+CLC++KSILPS G
Sbjct: 24  GAQAVAICNIDSSQLNLCRAAVT---GQNPPPPDEKCCAVIRQANLRCLCSYKSILPSFG 83

Query: 63  INITNALALPSKCDIKTP 122
           IN  NALALP KC +++P
Sbjct: 84  INPKNALALPGKCGLQSP 98

Query: 123  182
           
Sbjct: 144  98

Query: 183  237
           
Sbjct: 204  98

[Close]
BLAST of WMU06305 vs. TrEMBL
Match: C6T4Z3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-13
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = -3 

Query: 3   GTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIG 62
           G     +C ID+ +  +C+ AV    G+   PP + CC+V+R+A+L+CLC++KSILPS G
Sbjct: 24  GAQAVAICNIDSSQLSLCRAAVT---GQNPPPPDEKCCAVIRQANLRCLCSYKSILPSFG 83

Query: 63  INITNALALPSKCDIKTP 122
           IN  NALALP KC +++P
Sbjct: 84  INPKNALALPGKCGLQSP 98

Query: 123  182
           
Sbjct: 144  98

Query: 183  237
           
Sbjct: 204  98

[Close]
BLAST of WMU06305 vs. TrEMBL
Match: A0A0B2Q3M5_GLYSO (Putative lipid-transfer protein DIR1 OS=Glycine soja GN=glysoja_037560 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-13
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = -3 

Query: 3   GTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIG 62
           G     +C ID+ +  +C+ AV    G+   PP + CC+V+R+A+L+CLC++KSILPS G
Sbjct: 24  GAQAVAICNIDSSQLNLCRAAVT---GQNPPPPDEKCCAVIRQANLRCLCSYKSILPSFG 83

Query: 63  INITNALALPSKCDIKTP 122
           IN  NALALP KC +++P
Sbjct: 84  INPKNALALPGKCGLQSP 98

Query: 123  182
           
Sbjct: 144  98

Query: 183  237
           
Sbjct: 204  98

[Close]
BLAST of WMU06305 vs. NCBI nr
Match: gi|659093748|ref|XP_008447696.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-29
Identity = 67/102 (65.69%), Postives = 72/102 (70.59%), Query Frame = -3 

Query: 3   MLMTTNKFXXXXXXXXXXXXXXXAGTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKG 62
           M MT NKF               AGTS   LCK+DTK+  VC+PAVAP HGKPLQPPTK 
Sbjct: 1   MAMTNNKFLVPLFLRLLFLVMVLAGTSATLLCKVDTKKLCVCRPAVAPLHGKPLQPPTKR 60

Query: 63  CCSVLRRADLKCLCNFKSILPSIGINITNALALPSKCDIKTP 122
           CCSV+R ADLKCLCN KSILPS GIN T ALALPSKC I+TP
Sbjct: 61  CCSVVRSADLKCLCNLKSILPSAGINATIALALPSKCGIRTP 102

Query: 123  182
           
Sbjct: 121  102

Query: 183  242
           
Sbjct: 181  102

Query: 243  302
           
Sbjct: 241  102

Query: 303  309
           
Sbjct: 301  102

[Close]
BLAST of WMU06305 vs. NCBI nr
Match: gi|700203945|gb|KGN59078.1| (hypothetical protein Csa_3G759990 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26
Identity = 63/102 (61.76%), Postives = 70/102 (68.63%), Query Frame = -3 

Query: 3   MLMTTNKFXXXXXXXXXXXXXXXAGTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKG 62
           M++T NK                A T+   LCK+DTKE  VC+PAVAP HGKPLQPPT+ 
Sbjct: 1   MILTNNKSSVALFLRLLFLVMVLAETTATLLCKVDTKELCVCRPAVAPLHGKPLQPPTER 60

Query: 63  CCSVLRRADLKCLCNFKSILPSIGINITNALALPSKCDIKTP 122
           CCSVLR ADLKCLCN KSILPS GIN T ALALPSKC I +P
Sbjct: 61  CCSVLRSADLKCLCNLKSILPSAGINATIALALPSKCGIPSP 102

Query: 123  182
           
Sbjct: 121  102

Query: 183  242
           
Sbjct: 181  102

Query: 243  302
           
Sbjct: 241  102

Query: 303  309
           
Sbjct: 301  102

[Close]
BLAST of WMU06305 vs. NCBI nr
Match: gi|449465073|ref|XP_004150253.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19
Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = -3 

Query: 3   AGTSTNPLCKIDTKEPGVCQPAVAPW-HGKPLQPPTKGCCSVLRRADLKCLCNFKSILPS 62
           A  +  PLCKIDT +  +C+ AV P  HG+PL  PT+ CCSV+R ADLKCLCN KS+LPS
Sbjct: 19  AAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSVLPS 78

Query: 63  IGINITNALALPSKCDIKTP 122
           +GI+  NALALPSKC++ +P
Sbjct: 79  MGIDTANALALPSKCNVASP 98

Query: 123  182
           
Sbjct: 139  98

Query: 183  240
           
Sbjct: 199  98

[Close]
BLAST of WMU06305 vs. NCBI nr
Match: gi|659093746|ref|XP_008447695.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo])

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-18
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = -3 

Query: 3   STNPLCKIDTKEPGVCQPAVAPW-HGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGI 62
           +++PLC+IDT +  VC+PAV P  HGK L  PT  CCSV+RRADLKCLC+ K  LPS GI
Sbjct: 22  TSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSVVRRADLKCLCSLKYALPSFGI 81

Query: 63  NITNALALPSKCDIKTP 122
           N  NALALPSKC +  P
Sbjct: 82  NTANALALPSKCGVSPP 98

Query: 123  182
           
Sbjct: 142  98

Query: 183  231
           
Sbjct: 202  98

[Close]
BLAST of WMU06305 vs. NCBI nr
Match: gi|694376285|ref|XP_009364632.1| (PREDICTED: putative lipid-transfer protein DIR1, partial [Pyrus x bretschneideri])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = -3 

Query: 3   AGTSTNPLCKIDTKEPGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSI 62
           AG++   +C I++ +   C+PAV    GK  +PPTK CCSV+R+A+L CLCNFKS+LPSI
Sbjct: 27  AGSTAVSICNIESDQLKECRPAVT---GKSPKPPTKRCCSVVRQANLPCLCNFKSVLPSI 86

Query: 63  GINITNALALPSKCDIKTP 122
           GI+   A+ALP KC +KTP
Sbjct: 87  GIDPALAMALPKKCGLKTP 102

Query: 123  182
           
Sbjct: 147  102

Query: 183  240
           
Sbjct: 207  102

The following BLAST results are available for this feature:
BLAST of WMU06305 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G55450.11.8e-1038.16 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G55410.24.3e-0936.62 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G55460.11.3e-0840.00 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of WMU06305 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBB0_CUCSA2.6e-2661.76Uncharacterized protein OS=Cucumis sativus GN=Csa_3G759990 PE=4 SV=1[more]
A0A0A0LAS6_CUCSA1.4e-1960.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G760500 PE=4 SV=1[more]
K7MTB4_SOYBN5.5e-1347.44Uncharacterized protein OS=Glycine max GN=GLYMA_18G191800 PE=4 SV=1[more]
C6T4Z3_SOYBN5.5e-1347.44Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A0B2Q3M5_GLYSO5.5e-1347.44Putative lipid-transfer protein DIR1 OS=Glycine soja GN=glysoja_037560 PE=4 SV=1[more]
BLAST of WMU06305 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093748|ref|XP_008447696.1|4.6e-2965.69PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo][more]
gi|700203945|gb|KGN59078.1|2.2e-2661.76hypothetical protein Csa_3G759990 [Cucumis sativus][more]
gi|449465073|ref|XP_004150253.1|1.5e-1960.00PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus][more]
gi|659093746|ref|XP_008447695.1|1.7e-1862.34PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo][more]
gi|694376285|ref|XP_009364632.1|1.3e-1554.43PREDICTED: putative lipid-transfer protein DIR1, partial [Pyrus x bretschneideri... [more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla003273Cla003273gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0005959S1_0005959EST
S1_0018778S1_0018778EST
S1_0045659S1_0045659EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 24..103
score: 3.9
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 32..103
score: 1.03
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 55..102
score: 3.
NoneNo IPR availablePANTHERPTHR33122FAMILY NOT NAMEDcoord: 3..103
score: 5.0
NoneNo IPR availablePANTHERPTHR33122:SF4BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEINcoord: 3..103
score: 5.0