MU67008 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU67008
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUnknown protein
Locationchr9 : 3817354 .. 3817705 (-)
Sequence length352
The following sequences are available for this feature:

transcribed_cluster sequence

GAATCCATGGGAATGGTGTGTTTTGATATATCGATGATGAAGGAAAACAAGAGGGCACGAGCAGGGCCAGAGAGCAGCAGTGATATGAATAGCAGCAAGTGGAAGAAGCAGCAGCAGAGTCCATCTGTAGGAAACAGAAAGAATTGGTGCTCCTTACAAACTGCCACGGAAACCAGTGAAGTCGATCCTTTTGTTGCGTTTAAGAGCGTTTTTTCATTCCTTTGACTCCTCCTTTCTCAATCTTAATATGTTTTTCTTTTTCTCTCTCGGAGGCTATGCCGTACTTTGGAATAATATAATTAGTCCCGGCTCGGCTGGCAGCACAAGGCAGCCGTCCAATAAAATTTGTCAN
Library categoryESTs
melon CM-VEa library1
BLAST of MU67008 vs. TrEMBL
Match: A0A0A0KSF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523170 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 47/63 (74.60%), Postives = 49/63 (77.78%), Query Frame = 1

Query: 1    ESMGMVCFDISMMKENKRARAGPESSSDMNXXXXXXXXXXPSVGNRKNWCSLQTATETSE 60
            ESMGMVCFDISMMKENKRARAGPESS++MN          PSV NRK W SLQTATET E
Sbjct: 1046 ESMGMVCFDISMMKENKRARAGPESSTNMNSSKWKKQQQSPSVENRKKWRSLQTATETRE 1105

Query: 61   VDP 120
            VDP
Sbjct: 1106 VDP 1108

Query: 121  180
            
Sbjct: 1166 1108

Query: 181  190
            
Sbjct: 1226 1108

BLAST of MU67008 vs. NCBI nr
Match: gi|659117785|ref|XP_008458786.1| (PREDICTED: probable ATP-dependent DNA helicase HFM1 isoform X1 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 7.4e-21
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 1

Query: 1    ESMGMVCFDISMMKENKRARAGPESSSDMNXXXXXXXXXXPSVGNRKNWCSLQTATETSE 60
            ESMGMVCFDISMMKENKRARAGPESSSDMN          PSVGNRKNWCSLQTATETSE
Sbjct: 1091 ESMGMVCFDISMMKENKRARAGPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSE 1150

Query: 61   VDP 120
            VDP
Sbjct: 1151 VDP 1153

Query: 121  180
            
Sbjct: 1211 1153

Query: 181  190
            
Sbjct: 1271 1153

BLAST of MU67008 vs. NCBI nr
Match: gi|659117787|ref|XP_008458787.1| (PREDICTED: probable ATP-dependent DNA helicase HFM1 isoform X2 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 7.4e-21
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 1

Query: 1   ESMGMVCFDISMMKENKRARAGPESSSDMNXXXXXXXXXXPSVGNRKNWCSLQTATETSE 60
           ESMGMVCFDISMMKENKRARAGPESSSDMN          PSVGNRKNWCSLQTATETSE
Sbjct: 906 ESMGMVCFDISMMKENKRARAGPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSE 965

Query: 61  VDP 120
           VDP
Sbjct: 966 VDP 968

Query: 121 180
           
Sbjct: 1026 968

Query: 181 190
           
Sbjct: 1086 968

BLAST of MU67008 vs. NCBI nr
Match: gi|659117791|ref|XP_008458789.1| (PREDICTED: probable ATP-dependent DNA helicase HFM1 isoform X3 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 7.4e-21
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 1

Query: 1   ESMGMVCFDISMMKENKRARAGPESSSDMNXXXXXXXXXXPSVGNRKNWCSLQTATETSE 60
           ESMGMVCFDISMMKENKRARAGPESSSDMN          PSVGNRKNWCSLQTATETSE
Sbjct: 904 ESMGMVCFDISMMKENKRARAGPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSE 963

Query: 61  VDP 120
           VDP
Sbjct: 964 VDP 966

Query: 121 180
           
Sbjct: 1024 966

Query: 181 190
           
Sbjct: 1084 966

BLAST of MU67008 vs. NCBI nr
Match: gi|700196195|gb|KGN51372.1| (hypothetical protein Csa_5G523170 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 47/63 (74.60%), Postives = 49/63 (77.78%), Query Frame = 1

Query: 1    ESMGMVCFDISMMKENKRARAGPESSSDMNXXXXXXXXXXPSVGNRKNWCSLQTATETSE 60
            ESMGMVCFDISMMKENKRARAGPESS++MN          PSV NRK W SLQTATET E
Sbjct: 1046 ESMGMVCFDISMMKENKRARAGPESSTNMNSSKWKKQQQSPSVENRKKWRSLQTATETRE 1105

Query: 61   VDP 120
            VDP
Sbjct: 1106 VDP 1108

Query: 121  180
            
Sbjct: 1166 1108

Query: 181  190
            
Sbjct: 1226 1108

BLAST of MU67008 vs. NCBI nr
Match: gi|778703688|ref|XP_011655409.1| (PREDICTED: ATP-dependent DNA helicase MER3 homolog [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 47/63 (74.60%), Postives = 49/63 (77.78%), Query Frame = 1

Query: 1    ESMGMVCFDISMMKENKRARAGPESSSDMNXXXXXXXXXXPSVGNRKNWCSLQTATETSE 60
            ESMGMVCFDISMMKENKRARAGPESS++MN          PSV NRK W SLQTATET E
Sbjct: 1088 ESMGMVCFDISMMKENKRARAGPESSTNMNSSKWKKQQQSPSVENRKKWRSLQTATETRE 1147

Query: 61   VDP 120
            VDP
Sbjct: 1148 VDP 1150

Query: 121  180
            
Sbjct: 1208 1150

Query: 181  190
            
Sbjct: 1268 1150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KSF5_CUCSA1.7e-1674.60Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659117785|ref|XP_008458786.1|7.4e-2184.13PREDICTED: probable ATP-dependent DNA helicase HFM1 isoform X1 [Cucumis melo][more]
gi|659117787|ref|XP_008458787.1|7.4e-2184.13PREDICTED: probable ATP-dependent DNA helicase HFM1 isoform X2 [Cucumis melo][more]
gi|659117791|ref|XP_008458789.1|7.4e-2184.13PREDICTED: probable ATP-dependent DNA helicase HFM1 isoform X3 [Cucumis melo][more]
gi|700196195|gb|KGN51372.1|2.5e-1674.60hypothetical protein Csa_5G523170 [Cucumis sativus][more]
gi|778703688|ref|XP_011655409.1|2.5e-1674.60PREDICTED: ATP-dependent DNA helicase MER3 homolog [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C021564MELO3C021564gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
VEa0008B09VEa0008B09EST