MU65976 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU65976
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPre-mRNA-splicing factor CWC21
Locationchr3 : 25576681 .. 25579301 (+)
Sequence length864
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AAGCCCTCGACTATATTCATATTGTAATTTTCTATGCCTCCAGATTGATGCTTGGGGCACAGATGGAGAAGTTTTGGAAGTGACATTTCCCTCTGAGCAAGAAGTGGCTGACCTGGTAGCCACCAGCGAGAAGGAATATCATCATCGATTAGATCAGATACACACACCTAATTGCTGCAAGAAAGGAGGAGCAGATGAAAACATTGAAAGCTGCTCCCGGGTTGGGCTTCATCGAACGATAGTAAACAGGTTAAAGAAGAGATTTCTGGTCAAGGAATAGAAGAGGGGCAGATGGTGATATTAAGCTTCATAAGAAGTCTGAACACTCGTTTTTGGAAGACTATTCCACTGGAAAAAAACATGGCATTGAAAAAAAAACATTTTCCCGCACCGATTCTGGTGAGAGTAAAGAAACCAACAAGAAGCACTCGATAGATGATCAAAGAAATGATTCTGAAAATGAACTAGACAGCAGCAATTTTGGTATGAAAAGGAAGCATCAGGAAAACAGAAGGATATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCCTCTGCATTTTCTTCTGCGATAAGAGGCTATCAGATACACATATTCATCAAATTGC
Library
Library categoryESTs
melon CM-TEa library1
Homology
[Close]
BLAST of MU65976 vs. Swiss-Prot
Match: SRRM2_MOUSE (Serine/arginine repetitive matrix protein 2 OS=Mus musculus GN=Srrm2 PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 4.8e-13
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQAT-----ACLLKKPNKDILEH 577
           M N IGL T RGSGTNGY+Q N   VR        ++ +       A L+K+PN DIL+H
Sbjct: 1   MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRHLEAALVKRPNPDILDH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREAR 637
           +RKR++EL+   LE+ + +QG+ E++I  K+   R
Sbjct: 61  ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFR 95

Query: 638  697
           
Sbjct: 121  95

Query: 698  757
           
Sbjct: 181  95

Query: 758  788
           
Sbjct: 241  95

[Close]
BLAST of MU65976 vs. Swiss-Prot
Match: SRRM2_HUMAN (Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 4.8e-13
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQAT-----ACLLKKPNKDILEH 577
           M N IGL T RGSGTNGY+Q N   VR        ++ +       A L+K+PN DIL+H
Sbjct: 1   MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRRLEAALVKRPNPDILDH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREAR 637
           +RKR++EL+   LE+ + +QG+ E++I  K+   R
Sbjct: 61  ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFR 95

Query: 638  697
           
Sbjct: 121  95

Query: 698  757
           
Sbjct: 181  95

Query: 758  788
           
Sbjct: 241  95

[Close]
BLAST of MU65976 vs. Swiss-Prot
Match: CWC21_NEUCR (Pre-mRNA-splicing factor cwc-21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cwc-21 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-12
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTN--KFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRK 577
           M++ +GL T RGSGT+GY+Q N   F  R N +S    +  +     ++P+K +LEHDRK
Sbjct: 1   MSDNVGLSTPRGSGTSGYVQRNLAHFRPRDNYQSYPPKDFDSLKHQPRQPDKGLLEHDRK 60

Query: 578 RQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA 637
           R++E+K+F L D+L ++G  E EI  +  E R  L A
Sbjct: 61  REVEVKVFELRDKLEEEGVEEDEIETRCDELRRKLLA 97

Query: 638  697
           
Sbjct: 121  97

Query: 698  757
           
Sbjct: 181  97

Query: 758  803
           
Sbjct: 241  97

[Close]
BLAST of MU65976 vs. Swiss-Prot
Match: CWC21_GIBZE (Pre-mRNA-splicing factor CWC21 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CWC21 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFED-QATACLLKKPNKDILEHDRKR 577
           M++ +GL T RGSGT+GY+Q N   ++         +D  +     ++P+K ILEHDRKR
Sbjct: 1   MSDNVGLNTPRGSGTSGYVQRNLAHIKPRDYGAPYPKDLDSLRHKQRQPDKGILEHDRKR 60

Query: 578 QIELKLFILEDELSDQGFTEKEIFGKLREARENLEA 637
           ++E+K+F L D+L ++   E EI  +  E R+ L A
Sbjct: 61  EVEVKVFDLRDKLEEEEVDEDEIDKRCDELRQKLLA 96

Query: 638  697
           
Sbjct: 121  96

Query: 698  757
           
Sbjct: 181  96

Query: 758  803
           
Sbjct: 241  96

[Close]
BLAST of MU65976 vs. Swiss-Prot
Match: CWC21_USTMA (Pre-mRNA-splicing factor CWC21 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CWC21 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-10
Identity = 39/97 (40.21%), Postives = 51/97 (52.58%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTN--KFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRK 577
           M N IGL+TARG+GTNGY+Q N   F       + R   D+  +     P+  ILEH+RK
Sbjct: 1   MYNGIGLKTARGTGTNGYVQRNLSNFEAGKKRWNKRDATDEVGSDTRLGPDAAILEHERK 60

Query: 578 RQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA 637
           R +E+K   L  EL D    + EI  ++ + RE L A
Sbjct: 61  RAVEVKCMELRVELEDDDVADDEIEERVAQLRETLNA 97

Query: 638  697
           
Sbjct: 121  97

Query: 698  757
           
Sbjct: 181  97

Query: 758  803
           
Sbjct: 241  97

[Close]
BLAST of MU65976 vs. TrEMBL
Match: A0A0A0LQ00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379180 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-36
Identity = 91/128 (71.09%), Postives = 97/128 (75.78%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SLCIFFCDKRL 637
           DRKRQIELKL ILED+L++QG+TEKEI  KLREARENLEAA        S  I   DKR+
Sbjct: 61  DRKRQIELKLVILEDKLNEQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 638 SDTHIHQI 697
           SDT  HQI
Sbjct: 121 SDTQTHQI 128

Query: 698  757
           
Sbjct: 181  128

Query: 758  817
           
Sbjct: 241  128

Query: 818  863
           
Sbjct: 301  128

[Close]
BLAST of MU65976 vs. TrEMBL
Match: A0A0A0LQ00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379180 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-11
Identity = 63/150 (42.00%), Postives = 81/150 (54.00%), Query Frame = 3 

Query: 162 THLIAARKEEQMKTLKAAPGLGFIER**TG*RRDFW---SRNRR-GADGDIKLHKKSEHS 221
           TH IAARKEEQMKTL+AA GLG ++   +   +D     SRNRR G + D+K H+KSEHS
Sbjct: 125 THQIAARKEEQMKTLRAALGLGSLDD--SEQVKDEISDPSRNRREGQNADMKRHEKSEHS 184

Query: 222 FLEDYSTGKKHGIE-------------------------KKTFSRTDSGESKETNKKHSI 281
           FL+     KK G E                         K   S TDSGE K T KK+  
Sbjct: 185 FLDRDLNWKKRGTEDQYDDKDVKKGASKEMKQKDKKRRSKDDSSDTDSGERKGT-KKNLR 244

Query: 282 DDQRNDSENELD---SSNFGMKRKHQENRR 341
           D +RNDSE++LD   ++ +   R  ++NRR
Sbjct: 245 DSRRNDSESDLDIDVNNKYVASRNSKKNRR 271

Query: 342  401
           
Sbjct: 305  271

Query: 402  461
           
Sbjct: 365  271

Query: 462  516
           
Sbjct: 425  271


HSP 2 Score: 38.9 bits (89), Expect = 1.2e+01
Identity = 25/84 (29.76%), Postives = 43/84 (51.19%), Query Frame = 3 

Query: 273 RNRRGADGDIKLHKKSEHSFLEDYSTGKKHGIEKKTFSRTDSGESKETNKKHSIDDQRND 332
           RN   +D DI ++ K    ++   ++ K    +    S TDSG   +  KKHS + ++++
Sbjct: 245 RNDSESDLDIDVNNK----YVASRNSKKNRRHDSDDSSETDSGGEHKVTKKHSRNKRKDN 304

Query: 333 SENELDS---SNFGMKRKHQENRR 392
            E + DS     +   RKH++NRR
Sbjct: 305 LETDSDSDLDQKYLTSRKHKKNRR 324

Query: 393  452
           
Sbjct: 365  324

Query: 453  512
           
Sbjct: 425  324

Query: 513  516
           
Sbjct: 485  324


HSP 3 Score: 143.7 bits (361), Expect = 3.6e-31
Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQTN+FFV++     AE+TRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNRFFVKTKTGRVAETTRGFEGDQGTAGVSKKPNKDILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA--------ASLCIFFCDKRL 637
           DRKRQIELKL +LED+L+DQG+TE EI  KL+EAR  LEA            I   +K++
Sbjct: 61  DRKRQIELKLVVLEDKLTDQGYTEAEIVEKLQEARRTLEATYASEASGGPTAIVAAEKKV 120

Query: 638 SDTHIHQI 697
           SDT  HQI
Sbjct: 121 SDTQTHQI 128

Query: 698  757
           
Sbjct: 181  128

Query: 758  817
           
Sbjct: 241  128

Query: 818  863
           
Sbjct: 301  128

[Close]
BLAST of MU65976 vs. TrEMBL
Match: A0A059B0Q8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02470 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-02
Identity = 47/154 (30.52%), Postives = 68/154 (44.16%), Query Frame = 3 

Query: 162 THLIAARKEEQMKTLKAAPGLGFIER**TG*RRDFWSRNRRGADGDIKLHKK------SE 221
           TH IAARKE+QM+T +AA G+G  +            +N    D + K  +K       E
Sbjct: 125 THQIAARKEKQMETFRAALGIGLTK------------QNSEEIDDEPKGGQKILQQEIPE 184

Query: 222 HSFLE-DYSTGK----KHGIEK--KTFSRTDSGESKETNKKHSIDD-------------- 281
           H+FL+ DYS+ K    K  +EK  K  S  D    K+  +K   DD              
Sbjct: 185 HAFLDRDYSSKKQVEEKLKVEKDDKRNSARDMKHKKDNGRKRRHDDSSDSDDTSKQTRAT 244

Query: 282 ---------QRNDSENELDSSNFGMKRKHQENRR 341
                    +R+DSEN+ +      KRK Q+++R
Sbjct: 245 EKKHHRRHSRRSDSENDSEVETADRKRKKQKSKR 266

Query: 342  401
           
Sbjct: 305  266

Query: 402  461
           
Sbjct: 365  266

Query: 462  516
           
Sbjct: 425  266


HSP 2 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQ+NKFFV+      AE+T+GFE DQ TA + +KPNK+ILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQSNKFFVKPKISKVAENTKGFEADQGTAGVTRKPNKEILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA-------SLCIFFCDKRLS 637
           DRKRQI+LKL ILED+L DQG+T+ EI  KL EAR+NLEAA       S  +   DK++S
Sbjct: 61  DRKRQIQLKLVILEDKLIDQGYTDAEIAEKLEEARQNLEAAATEENDGSASVSATDKKVS 120

Query: 638 DTHIHQI 697
           DT  HQI
Sbjct: 121 DTQTHQI 127

Query: 698  757
           
Sbjct: 181  127

Query: 758  817
           
Sbjct: 241  127

Query: 818  863
           
Sbjct: 301  127

[Close]
BLAST of MU65976 vs. TrEMBL
Match: A0A151TZC4_CAJCA (Serine/arginine repetitive matrix protein 2 OS=Cajanus cajan GN=KK1_004975 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 2.9e-01
Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = 3 

Query: 162 THLIAARKEEQMKTLKAAPGL--GFIER**TG*RRDFWSRNRRGADGDIKLHKKSEHSFL 221
           TH IAARKE+QM+ +KAA G+    +            +  +  ++ + K + K EH+FL
Sbjct: 124 THQIAARKEKQMEAMKAALGIVSSEVNEINADGNDGLGNDGKNDSNAEGKHNSKPEHAFL 183

Query: 222 EDYSTGKKHGIE--------KKTFSRTDSGESKET-NKKHSID-DQRNDSENELDSSNFG 281
           +   + KK  +E        KK    T   +  ET  KK+  D    +DS++ L     G
Sbjct: 184 DRDFSRKKQVVEDQKDENAKKKGVKDTRHHKKVETRQKKYEFDSSDSSDSDSSLYDKKGG 243

Query: 282 MKRKHQE 341
            +RKH +
Sbjct: 244 GRRKHSK 250

Query: 342  401
           
Sbjct: 304  250

Query: 402  461
           
Sbjct: 364  250

Query: 462  507
           
Sbjct: 424  250


HSP 2 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 79/125 (63.20%), Postives = 93/125 (74.40%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQ+NKFFV+      AE+T+GFE DQ TA L +KPNK+ILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQSNKFFVKPKISKVAENTKGFESDQGTAGLSRKPNKEILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS-----LCIFFCDKRLSDT 637
           DRKRQIELKL ILED+L DQG+T+ EI  KL E R+NLEAA+       +   DK++SDT
Sbjct: 61  DRKRQIELKLVILEDKLIDQGYTDAEIAEKLEETRQNLEAAAATDELASVSASDKKVSDT 120

Query: 638 HIHQI 697
             HQI
Sbjct: 121 QTHQI 125

Query: 698  757
           
Sbjct: 181  125

Query: 758  817
           
Sbjct: 241  125

Query: 818  863
           
Sbjct: 301  125

[Close]
BLAST of MU65976 vs. TrEMBL
Match: A0A0L9U6H8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g177700 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.6e-02
Identity = 44/138 (31.88%), Postives = 60/138 (43.48%), Query Frame = 3 

Query: 162 THLIAARKEEQMKTLKAAPGLGFIER**TG*RRDFWSRNRRGADG-----------DIKL 221
           TH IAARKE+QM++LKAA G+   E          ++ N  G DG           D K 
Sbjct: 122 THQIAARKEKQMESLKAALGIVSSE----------FNENADGTDGHGNDGKNGSNMDGKH 181

Query: 222 HKKSEHSFLEDYSTGKKHGIE-------KKTFSRTDSGESKETNKKHSIDD--QRNDSEN 281
           + K EH+FL+   + KK  +E       KK+   T   +   T +K S DD    +DS  
Sbjct: 182 NSKPEHAFLDRDFSRKKQMVEGQNDENVKKSLRDTRHHKKIGTREKKSEDDSSDSSDSSE 241

Query: 282 ELDSSNFGMKRKHQENRR 341
             DS       K    +R
Sbjct: 242 SSDSETSSPNEKRSTKKR 249

Query: 342  401
           
Sbjct: 302  249

Query: 402  461
           
Sbjct: 362  249

Query: 462  516
           
Sbjct: 422  249


HSP 2 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 79/125 (63.20%), Postives = 93/125 (74.40%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQ+NKFFV+      AE+T+GFE DQ TA L +KPNK+ILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQSNKFFVKPKISKVAENTKGFESDQGTAGLSRKPNKEILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS-----LCIFFCDKRLSDT 637
           DRKRQIELKL ILED+L DQG+T+ EI  KL E R+NLEAA+       +   DK++SDT
Sbjct: 61  DRKRQIELKLVILEDKLIDQGYTDAEIAEKLEETRQNLEAAAATDELASVSASDKKVSDT 120

Query: 638 HIHQI 697
             HQI
Sbjct: 121 QTHQI 125

Query: 698  757
           
Sbjct: 181  125

Query: 758  817
           
Sbjct: 241  125

Query: 818  863
           
Sbjct: 301  125

[Close]
BLAST of MU65976 vs. TAIR10
Match: AT3G49601.1 (AT3G49601.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 73/122 (59.84%), Postives = 86/122 (70.49%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN-----AESTRGFED-QATACLLKKPNKDILE 577
           M N IGLQTARGSGTNGY+QTNKFFVR        +  +GFED + TA L KKPNK ILE
Sbjct: 1   MYNGIGLQTARGSGTNGYVQTNKFFVRPRNGGKPVKGGKGFEDDEGTAGLSKKPNKAILE 60

Query: 578 HDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASLC-IFFCDKRLSDTHIH 637
           HDRKRQI LKL ILED+L+DQG+++ EI  KL EAR +LEAA+       D ++S+T  H
Sbjct: 61  HDRKRQIHLKLAILEDKLADQGYSDIEIAQKLEEARVSLEAAAAANEEESDSKVSNTQTH 120

Query: 638 QI 697
           Q+
Sbjct: 121 QV 122

Query: 698  757
           
Sbjct: 181  122

Query: 758  817
           
Sbjct: 241  122

Query: 818  863
           
Sbjct: 301  122


HSP 2 Score: 37.7 bits (86), Expect = 1.4e-02
Identity = 36/139 (25.90%), Postives = 60/139 (43.17%), Query Frame = 3 

Query: 162 THLIAARKEEQMKTLKAAPGL---------GFIER**TG*RRDFWSRNRRGADGDIKLHK 221
           TH +AARKE+QM+  +AA GL         G I+              R G +G  +L +
Sbjct: 119 THQVAARKEKQMEAFRAALGLPDQQQVAEEGIIDD----------EPMREGFEG--RLKE 178

Query: 222 KSEHSFLEDYSTGKK--HGIEKKTFSRTDSGESK----------ETNKKHSIDDQRNDSE 281
           + EHSFL+  S  KK    +++K     +S + +          + +KK     +R+D  
Sbjct: 179 RREHSFLDRDSGRKKVDEDVDEKDAKVKESKKQRGGDDDDVDVVKRHKKKESKKRRHDDS 238

Query: 282 NELDSSNFGMKRKHQENRR 341
           +E D      +R+ ++  +
Sbjct: 239 SESDEHGRDRRRRSKKKAK 245

Query: 342  401
           
Sbjct: 299  245

Query: 402  461
           
Sbjct: 359  245

Query: 462  516
           
Sbjct: 419  245

[Close]
BLAST of MU65976 vs. NCBI nr
Match: gi|659088696|ref|XP_008445113.1| (PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 3.6e-53
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 577
           MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ
Sbjct: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60

Query: 578 IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASLCIFFCDKRLSDTHIHQI 637
           IELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS  I   DKRLSDTHIHQI
Sbjct: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQI 115

Query: 638  697
           
Sbjct: 121  115

Query: 698  757
           
Sbjct: 181  115

Query: 758  817
           
Sbjct: 241  115

Query: 818  863
           
Sbjct: 301  115

[Close]
BLAST of MU65976 vs. NCBI nr
Match: gi|659088679|ref|XP_008445109.1| (PREDICTED: dentin sialophosphoprotein-like [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 92/128 (71.88%), Postives = 97/128 (75.78%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SLCIFFCDKRL 637
           DRKRQIELKL ILED+L+DQG+TEKEI  KLREARENLEAA        S  I   DKR+
Sbjct: 61  DRKRQIELKLVILEDKLNDQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 638 SDTHIHQI 697
           SDT  HQI
Sbjct: 121 SDTQTHQI 128

Query: 698  757
           
Sbjct: 181  128

Query: 758  817
           
Sbjct: 241  128

Query: 818  863
           
Sbjct: 301  128

[Close]
BLAST of MU65976 vs. NCBI nr
Match: gi|449442210|ref|XP_004138875.1| (PREDICTED: dentin sialophosphoprotein [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35
Identity = 91/128 (71.09%), Postives = 97/128 (75.78%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SLCIFFCDKRL 637
           DRKRQIELKL ILED+L++QG+TEKEI  KLREARENLEAA        S  I   DKR+
Sbjct: 61  DRKRQIELKLVILEDKLNEQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 638 SDTHIHQI 697
           SDT  HQI
Sbjct: 121 SDTQTHQI 128

Query: 698  757
           
Sbjct: 181  128

Query: 758  817
           
Sbjct: 241  128

Query: 818  863
           
Sbjct: 301  128

[Close]
BLAST of MU65976 vs. NCBI nr
Match: gi|702439905|ref|XP_010023443.1| (PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQTN+FFV++     AE+TRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNRFFVKTKTGRVAETTRGFEGDQGTAGVSKKPNKDILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA--------ASLCIFFCDKRL 637
           DRKRQIELKL +LED+L+DQG+TE EI  KL+EAR  LEA            I   +K++
Sbjct: 61  DRKRQIELKLVVLEDKLTDQGYTEAEIVEKLQEARRTLEATYASEASGGPTAIVAAEKKV 120

Query: 638 SDTHIHQI 697
           SDT  HQI
Sbjct: 121 SDTQTHQI 128

Query: 698  757
           
Sbjct: 181  128

Query: 758  817
           
Sbjct: 241  128

Query: 818  863
           
Sbjct: 301  128

[Close]
BLAST of MU65976 vs. NCBI nr
Match: gi|702439913|ref|XP_010023445.1| (PREDICTED: serine/arginine repetitive matrix protein 2 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 2 

Query: 518 MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 577
           M N IGLQT RGSGTNGYIQTN+FFV++     AE+TRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNRFFVKTKTGRVAETTRGFEGDQGTAGVSKKPNKDILEH 60

Query: 578 DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA--------ASLCIFFCDKRL 637
           DRKRQIELKL +LED+L+DQG+TE EI  KL+EAR  LEA            I   +K++
Sbjct: 61  DRKRQIELKLVVLEDKLTDQGYTEAEIVEKLQEARRTLEATYASEASGGPTAIVAAEKKV 120

Query: 638 SDTHIHQI 697
           SDT  HQI
Sbjct: 121 SDTQTHQI 128

Query: 698  757
           
Sbjct: 181  128

Query: 758  817
           
Sbjct: 241  128

Query: 818  863
           
Sbjct: 301  128

The following BLAST results are available for this feature:
BLAST of MU65976 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SRRM2_MOUSE4.8e-1342.11Serine/arginine repetitive matrix protein 2 OS=Mus musculus GN=Srrm2 PE=1 SV=3[more]
SRRM2_HUMAN4.8e-1342.11Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2[more]
CWC21_NEUCR4.1e-1241.24Pre-mRNA-splicing factor cwc-21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2... [more]
CWC21_GIBZE1.7e-1038.54Pre-mRNA-splicing factor CWC21 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 /... [more]
CWC21_USTMA6.5e-1040.21Pre-mRNA-splicing factor CWC21 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CW... [more]
BLAST of MU65976 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ00_CUCSA6.3e-3671.09Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379180 PE=4 SV=1[more]
A0A0A0LQ00_CUCSA1.1e-1142.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379180 PE=4 SV=1[more]
A0A059B0Q8_EUCGR2.0e-0230.52Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02470 PE=4 SV=1[more]
A0A151TZC4_CAJCA2.9e-0129.92Serine/arginine repetitive matrix protein 2 OS=Cajanus cajan GN=KK1_004975 PE=4 ... [more]
A0A0L9U6H8_PHAAN1.6e-0231.88Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g177700 PE=4 SV=1[more]
BLAST of MU65976 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49601.11.3e-2959.84 FUNCTIONS IN: molecular_function unknown[more]
BLAST of MU65976 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088696|ref|XP_008445113.1|3.6e-5395.65PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo][more]
gi|659088679|ref|XP_008445109.1|1.5e-3571.88PREDICTED: dentin sialophosphoprotein-like [Cucumis melo][more]
gi|449442210|ref|XP_004138875.1|4.5e-3571.09PREDICTED: dentin sialophosphoprotein [Cucumis sativus][more]
gi|702439905|ref|XP_010023443.1|2.5e-3062.50PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1 [Eucalyptus ... [more]
gi|702439913|ref|XP_010023445.1|2.5e-3062.50PREDICTED: serine/arginine repetitive matrix protein 2 isoform X2 [Eucalyptus gr... [more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR013170mRNA_splic_Cwf21_dom
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C011206MELO3C011206gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
TEa0006O09TEa0006O09EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013170mRNA splicing factor Cwf21 domainPFAMPF08312cwf21coord: 226..267
score: 3.0
IPR013170mRNA splicing factor Cwf21 domainSMARTSM01115cwf21_2coord: 226..271
score: 1.
NoneNo IPR availablePANTHERPTHR32093FAMILY NOT NAMEDcoord: 173..255
score: 1.7
NoneNo IPR availablePANTHERPTHR32093:SF13SERINE/ARGININE REPETITIVE MATRIX PROTEIN 2coord: 173..255
score: 1.7