MELO3C011206 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011206
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pre-mRNA-splicing factor CWC21
Location	chr3 : 25576681 .. 25579584 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCCTCGACTATATTCATATTGTAATTTTCTATGCCTCCAGATTGATGCTTGGGGCACAGATGGAGAAGTTTTGGAAGTGACATTTCCCTCTGAGCAAGAAGTGGCTGACCTGGTAGCCACCAGCGAGAAGGAATATCATCATCGATTAGGTACTGATTGCTTCTCCTTTATTGTTCTCTTCTAACCTGGGATGATGAACTTGGGAGAAAATTAATGAAGGGGTCATCATTAGGTTCCATTGCCTGTGGCTGTACATATTAGGTCAACTGCAACAGCTCGTAGAAGAAAGACTAGAAAAGTTTAAAAACAATTCTATTGTTTGTTATGTCTGCATGTTTTAAAAAATAAAGTAGAGTTCACCGACAGAAACGTGGGTCCACAAATATTTATGGAGACAAATTCCTAGTGTGAACAAAGGGATTGCTAGAAAATTTCTCAATCAAGCTTAGCCTTTCCTCCATTGAGCTTTGCCTAGATTATTGATTTTGTTTTATTGTCTTTTACATCTTCACTTTTAATCTTGGAAACATATTCATATTTTGTATTTTCTTACATGATAATAATAATAATTATTATCATTATTATTAATATTTAACCAATTTTGATATAAATTAACTTCAACATACTAAATTTAAGGACTACACCTACTAATATACACAATTCCATTTATTATTGGTTGTGCAATAATAAATGGTAATTTTCTCGAGTATGAATAAGAAAGTGGCCTATATAAAATTTGTTTGTTAATTAATAATTTCATGGCTCTGTGCTCTTTTCCTTCGTGGTTTTATAAAAATTTATTCTCCTAATTAGGTCATTCTGTTGATTCTGATCTTATATCATACAAGTAGCTTTGTACCGGCTGCTGTTTTCTTATTTTTTGGACAAGTGATTGCCTAAATGGTGTTTTCCTTGATTAAACCCATCACAGATCAGATACACACACCTAATTGCTGCAAGAAAGGAGGAGCAGATGAAAACATTGAAAGCTGCTCCCGGGTTGGGCTTCATCGAACGATAGTAAACAGGTTAAAGAAGAGATTTCTGGTCAAGGAATAGAAGAGGGGCAGATGGTGATATTAAGCTTCATAAGAAGTCTGAACACTCGTTTTTGGAAGACTATTCCACTGGAAAAAAACATGGCATTGAAAAAAAAAAATCATTTTCCCGCACCGATTCTGGTGAGAGTAAAGAAACCAACAAGAAGCACTCGATAGATGATCAAAGAAATGATTCTGAAAATGAACTAGACAGCAGCAATTTTGGTATGAAAAGGAAGCATCAGGAAAACAGAAGGTATGAGAGTGATGGTTCTGTTTTTTTGAGGCAACCATCGAAGTCTAGAGACTAAATTCTTTACTGCTAGACCGTACTGAATTTTCGAGATTAATTTTGTAATTAACTAAAAATTATAATAAAGGGCAGACTCATTATGACTTATAGTTAAATTTCACAAGTGTTTAGTTTGATTCTTCGTACTAATTATAGTAATGATAATAAAATGTCATTCAACTACTAAAAAGATTTTAAAACTTTTTTTTTCTTTTATTATACTAAAATCGTAAAACTTACTAGAAAAATTGTAGTTTGGGTGTGTAAAAAATATTAGGACAACCCTCCAATAAAATAGAGAAGAGAGAAAAGTGGTCAAATATTTCTTTTTCAACCTTCTCACTATTCAATAAAAAAATATAGAGACACATATAATCGTTTATCTTAATTTATGTAGTCATATAGTTTATCTAGGTTAGATTGTGATATTTGTAAATATATTTAATAATTGCATCATTTAAAATAAATTTTCTTAATAAAATATAGATATGAGATAATAGATGATTATTTGTTTTTCATTTTAGAGAAAATTGCATAAACAACTTGGTGTTTGTTATAATTACATCCTTAAAATTTTAATTTATCGATCACCATACTTAAAACTTTTAGTTGAACCCCACTTGGGGTTTATTTTGTTTGGGATTAGTGTCTTTTTCTTCACTATTATTAAATGCTTTGAATGATTCAGGATATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCTCTGCCATTCTTCTTGCCGATAAGAGGTATGATGTTCACTCGATCATTTTGTGGGTTTGATACACAAAAGCTTGAAGAGATTGAATAATAAATTGCTGAATATTTGATAGATGGGAAGTCATTGAGATTTCCTTTTATTCTGTTATTATAATCAGAAATTCTCAAATACCATTCTTTTGGTATTTAGTTTTTGTTAATTTAGTATACTAAATTTGTTTGGATTTCAGAAATTCTCAAATACCATTCTTTTGTTGGCATCCCTTGATTGAATAGGCTATCAGATACACATATTCATCAAATTGCTGCAAGAAAGGAGAAGCAGACGAAAACATTTAGAGCTGCTCTTGGGTTGGGTTCATTATTGGATGATGGCGAACTATGTTAAAGAGATTTCATCCATCAAGGAATGGGAGAGAGGGTCAGAAAGCATGTTAGTCAAGTCTTCATATTAAATTTGAGAAAGTATCCTAAGAAAGATGATCGTAGACGCAGACATGACATTGATGATGAAAAAAGTGGCGATAACAGCTCTAGCAGTGATGAATTAGTGAAGAGACGCCGAGGTAGGAGGCACAATAGTGATGATA

mRNA sequence

AAGCCCTCGACTATATTCATATTGTAATTTTCTATGCCTCCAGATTGATGCTTGGGGCACAGATGGAGAAGTTTTGGAAGTGACATTTCCCTCTGAGCAAGAAGTGGCTGACCTGGTAGCCACCAGCGAGAAGGAATATCATCATCGATTAGATCAGATACACACACCTAATTGCTGCAAGAAAGGAGGAGCAGATGAAAACATTGAAAGCTGCTCCCGGGTTGGGCTTCATCGAACGATAGTAAACAGGTTAAAGAAGAGATTTCTGGTCAAGGAATAGAAGAGGGGCAGATGGTGATATTAAGCTTCATAAGAAGTCTGAACACTCGTTTTTGGAAGACTATTCCACTGGAAAAAAACATGGCATTGAAAAAAAAAAATCATTTTCCCGCACCGATTCTGGTGAGAGTAAAGAAACCAACAAGAAGCACTCGATAGATGATCAAAGAAATGATTCTGAAAATGAACTAGACAGCAGCAATTTTGGTATGAAAAGGAAGCATCAGGAAAACAGAAGGATATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCTCTGCCATTCTTCTTGCCGATAAGAGGCTATCAGATACACATATTCATCAAATTGCTGCAAGAAAGGAGAAGCAGACGAAAACATTTAGAGCTGCTCTTGGGTTGGGTTCATTATTGGATGATGGCGAACTATGTTAAAGAGATTTCATCCATCAAGGAATGGGAGAGAGGGTCAGAAAGCATGTTAGTCAAGTCTTCATATTAAATTTGAGAAAGTATCCTAAGAAAGATGATCGTAGACGCAGACATGACATTGATGATGAAAAAAGTGGCGATAACAGCTCTAGCAGTGATGAATTAGTGAAGAGACGCCGAGGTAGGAGGCACAATAGTGATGATA

Coding sequence (CDS)

ATGAATAACCGTATTGGATTGCAGACTGCCAGAGGGTCTGGCACTAATGGTTATATCCAGACAAACAAGTTTTTTGTGAGGTCAAATGCTGAAAGCACCAGAGGATTTGAAGATCAGGCCACTGCTTGTCTTCTTAAGAAACCCAATAAAGACATTCTCGAGCATGACCGCAAGCGTCAGATTGAACTCAAACTCTTCATACTTGAAGACGAGCTCAGTGACCAAGGCTTTACAGAGAAGGAGATTTTTGGAAAGTTGAGGGAAGCTCGGGAGAATTTGGAAGCTGCTTCCTCTGCCATTCTTCTTGCCGATAAGAGGCTATCAGATACACATATTCATCAAATTGCTGCAAGAAAGGAGAAGCAGACGAAAACATTTAGAGCTGCTCTTGGGTTGGGTTCATTATTGGATGATGGCGAACTATGTTAA

Protein sequence

MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKEKQTKTFRAALGLGSLLDDGELC*

Homology

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BLAST of MELO3C011206 vs. Swiss-Prot
Match: SRRM2_HUMAN (Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 7.9e-17
Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQAT-----ACLLKKPNKDILEH 60
           M N IGL T RGSGTNGY+Q N   VR        ++ +       A L+K+PN DIL+H
Sbjct: 1   MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRRLEAALVKRPNPDILDH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREAR----ENLEAASSAILLADKRLSDTH 120
           +RKR++EL+   LE+ + +QG+ E++I  K+   R    E             +R + T 
Sbjct: 61  ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTE 120

Query: 121 IHQIAARKEKQTKTFRAALGLGSLLDDG 140
            HQ+A   EK+ +  RAA G+     DG
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDG 148

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BLAST of MELO3C011206 vs. Swiss-Prot
Match: SRRM2_MOUSE (Serine/arginine repetitive matrix protein 2 OS=Mus musculus GN=Srrm2 PE=1 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQAT-----ACLLKKPNKDILEH 60
           M N IGL T RGSGTNGY+Q N   VR        ++ +       A L+K+PN DIL+H
Sbjct: 1   MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRHLEAALVKRPNPDILDH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREAR----ENLEAASSAILLADKRLSDTH 120
           +RKR++EL+   LE+ + +QG+ E++I  K+   R    E      +      +R   T 
Sbjct: 61  ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGAKEETPGQRPVVTE 120

Query: 121 IHQIAARKEKQTKTFRAALGLGSLLDDG 140
            HQ+A   EK+ +  RAA G+     DG
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDG 148

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BLAST of MELO3C011206 vs. Swiss-Prot
Match: CWC21_NEUCR (Pre-mRNA-splicing factor cwc-21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cwc-21 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTN--KFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRK 60
           M++ +GL T RGSGT+GY+Q N   F  R N +S    +  +     ++P+K +LEHDRK
Sbjct: 1   MSDNVGLSTPRGSGTSGYVQRNLAHFRPRDNYQSYPPKDFDSLKHQPRQPDKGLLEHDRK 60

Query: 61  RQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA-------ASSAILLADKRLSDTH 120
           R++E+K+F L D+L ++G  E EI  +  E R  L A       +  A     K L    
Sbjct: 61  REVEVKVFELRDKLEEEGVEEDEIETRCDELRRKLLAEMERNQNSRGAPTGPRKNLKMHQ 120

Query: 121 IHQIAARKEKQTKTFRAALGLGSLLDDG 140
           +H++A  K K+++  R AL +     +G
Sbjct: 121 VHELADAKIKESERLRQALKISRDYQEG 148

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BLAST of MELO3C011206 vs. Swiss-Prot
Match: CWC21_GIBZE (Pre-mRNA-splicing factor CWC21 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CWC21 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-13
Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFED-QATACLLKKPNKDILEHDRKR 60
           M++ +GL T RGSGT+GY+Q N   ++         +D  +     ++P+K ILEHDRKR
Sbjct: 1   MSDNVGLNTPRGSGTSGYVQRNLAHIKPRDYGAPYPKDLDSLRHKQRQPDKGILEHDRKR 60

Query: 61  QIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLA---DKRLSDTHIHQIA 120
           ++E+K+F L D+L ++   E EI  +  E R+ L A  +         K      +H++A
Sbjct: 61  EVEVKVFDLRDKLEEEEVDEDEIDKRCDELRQKLLAEMNLGRRGGGPKKSFKQHQVHEMA 120

Query: 121 ARKEKQTKTFRAALGLGSLLDDG 140
             K K+++  R AL + +  ++G
Sbjct: 121 DAKIKESERLRKALKISADYEEG 143

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BLAST of MELO3C011206 vs. Swiss-Prot
Match: CWC21_CRYNB (Pre-mRNA-splicing factor CWC21 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CWC21 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.5e-12
Identity = 49/149 (32.89%), Postives = 73/149 (48.99%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRG----------FEDQATACLLKKPNK 60
           M   +GL TARGSGTNGY+  N   +R       G           E  +   + + P++
Sbjct: 1   MYGNVGLATARGSGTNGYVTRNTAHLRIREGPPGGQPYGSGYDALLESVSKPPIHRAPDQ 60

Query: 61  DILEHDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDT 120
            ILEH+RKR++E+K+  L DEL ++G  E +I  +  + R+ L A    +     R  DT
Sbjct: 61  GILEHERKRRVEVKVMELRDELEEKGMEEDDIEEECSKLRQKLTAQPEQL---GGRGLDT 120

Query: 121 HIHQIAARKEKQTKTFRAALGLGSLLDDG 140
             H +AA KE +    + ALG+    ++G
Sbjct: 121 --HSLAAAKEIEMSRLQRALGVSVNHEEG 144

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BLAST of MELO3C011206 vs. TrEMBL
Match: A0A0A0LQ00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379180 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.7e-48
Identity = 115/153 (75.16%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L++QG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNEQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS LDD E
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LDDSE 152

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BLAST of MELO3C011206 vs. TrEMBL
Match: A0A059B0Q8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02470 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.5e-42
Identity = 98/153 (64.05%), Postives = 116/153 (75.82%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTN+FFV++     AE+TRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNRFFVKTKTGRVAETTRGFEGDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA--------ASSAILLADKRL 120
           DRKRQIELKL +LED+L+DQG+TE EI  KL+EAR  LEA          +AI+ A+K++
Sbjct: 61  DRKRQIELKLVVLEDKLTDQGYTEAEIVEKLQEARRTLEATYASEASGGPTAIVAAEKKV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKEKQ +TFRAALG+G    + E
Sbjct: 121 SDTQTHQIAARKEKQMETFRAALGIGLTKQNSE 153

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BLAST of MELO3C011206 vs. TrEMBL
Match: A0A067KD23_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07697 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-39
Identity = 97/160 (60.62%), Postives = 115/160 (71.88%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFV+S     A +T+GFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVKSRTGKVAHNTKGFEGDQGTAGITKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS-------SAILLADKRLS 120
           DRKRQI LKL +LED+L DQG+T+ EI  KL EAR+ LEAAS       SA +++D ++S
Sbjct: 61  DRKRQIHLKLVVLEDKLIDQGYTDVEIAEKLEEARKTLEAASAAEESGGSAAVVSDMKVS 120

Query: 121 DTHIHQIAARKEKQTKTFRAALGL---------GSLLDDG 140
           DT  HQIAARKEKQ +T RAALG+           ++DDG
Sbjct: 121 DTQSHQIAARKEKQMETLRAALGIRMSEPDDQNAEVIDDG 160

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BLAST of MELO3C011206 vs. TrEMBL
Match: M5XQ36_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001581mg PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-39
Identity = 92/147 (62.59%), Postives = 113/147 (76.87%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFED-QATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFF++S     A+S+RGF+D Q    ++KK N+DILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFIKSRTGKVADSSRGFDDDQGMGGVMKKANRDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQI+LKL +LED+L DQGFT+ EI  KL EAR+ LEAA        S+A++++DK++
Sbjct: 61  DRKRQIQLKLVVLEDKLIDQGFTDTEIAEKLEEARKTLEAAAASEELGGSTAVVISDKKV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGS 135
           SDT  HQIAARKEKQ +T RAALGL S
Sbjct: 121 SDTQTHQIAARKEKQMETLRAALGLAS 147

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BLAST of MELO3C011206 vs. TrEMBL
Match: W9R9Q3_9ROSA (Protein arginine N-methyltransferase 1.5 OS=Morus notabilis GN=L484_014903 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-38
Identity = 91/142 (64.08%), Postives = 109/142 (76.76%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFV+      AE+T+GFE DQ TA + +K NK+ILEH
Sbjct: 598 MYNGIGLQTPRGSGTNGYIQTNKFFVKPKVGKVAENTKGFEADQGTAGVTRKANKEILEH 657

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAAS---SAILLADKRLSDTHI 120
           DRKRQIE+KL +LED+L DQG+T+ EI  KL EAR  LEAA+   S +L  DK++SDT  
Sbjct: 658 DRKRQIEIKLVVLEDKLIDQGYTDAEIAEKLAEARRTLEAAASDDSGVLAVDKKVSDTQT 717

Query: 121 HQIAARKEKQTKTFRAALGLGS 135
           HQIAARKEKQ +T +AALG+ S
Sbjct: 718 HQIAARKEKQMETLKAALGIRS 739

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BLAST of MELO3C011206 vs. TAIR10
Match: AT3G49601.1 (AT3G49601.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 88/139 (63.31%), Postives = 104/139 (74.82%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN-----AESTRGFED-QATACLLKKPNKDILE 60
           M N IGLQTARGSGTNGY+QTNKFFVR        +  +GFED + TA L KKPNK ILE
Sbjct: 1   MYNGIGLQTARGSGTNGYVQTNKFFVRPRNGGKPVKGGKGFEDDEGTAGLSKKPNKAILE 60

Query: 61  HDRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSA-ILLADKRLSDTHIH 120
           HDRKRQI LKL ILED+L+DQG+++ EI  KL EAR +LEAA++A    +D ++S+T  H
Sbjct: 61  HDRKRQIHLKLAILEDKLADQGYSDIEIAQKLEEARVSLEAAAAANEEESDSKVSNTQTH 120

Query: 121 QIAARKEKQTKTFRAALGL 133
           Q+AARKEKQ + FRAALGL
Sbjct: 121 QVAARKEKQMEAFRAALGL 139

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BLAST of MELO3C011206 vs. NCBI nr
Match: gi|659088696|ref|XP_008445113.1| (PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 2.3e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60
           MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ
Sbjct: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSNAESTRGFEDQATACLLKKPNKDILEHDRKRQ 60

Query: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE 120
           IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE
Sbjct: 61  IELKLFILEDELSDQGFTEKEIFGKLREARENLEAASSAILLADKRLSDTHIHQIAARKE 120

Query: 121 KQTKTFRAALGLGSLLDDGELC 143
           KQTKTFRAALGLGSLLDDGELC
Sbjct: 121 KQTKTFRAALGLGSLLDDGELC 142

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BLAST of MELO3C011206 vs. NCBI nr
Match: gi|659088679|ref|XP_008445109.1| (PREDICTED: dentin sialophosphoprotein-like [Cucumis melo])

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-48
Identity = 116/153 (75.82%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L+DQG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNDQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS L DGE
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LGDGE 152

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BLAST of MELO3C011206 vs. NCBI nr
Match: gi|449442210|ref|XP_004138875.1| (PREDICTED: dentin sialophosphoprotein [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 3.9e-48
Identity = 115/153 (75.16%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTNKFFVR      AESTRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEAA--------SSAILLADKRL 120
           DRKRQIELKL ILED+L++QG+TEKEI  KLREARENLEAA        SSAI+LADKR+
Sbjct: 61  DRKRQIELKLVILEDKLNEQGYTEKEISEKLREARENLEAASGSEEKDGSSAIVLADKRV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKE+Q KT RAALGLGS LDD E
Sbjct: 121 SDTQTHQIAARKEEQMKTLRAALGLGS-LDDSE 152

[Close]

BLAST of MELO3C011206 vs. NCBI nr
Match: gi|702439905|ref|XP_010023443.1| (PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 98/153 (64.05%), Postives = 116/153 (75.82%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTN+FFV++     AE+TRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNRFFVKTKTGRVAETTRGFEGDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA--------ASSAILLADKRL 120
           DRKRQIELKL +LED+L+DQG+TE EI  KL+EAR  LEA          +AI+ A+K++
Sbjct: 61  DRKRQIELKLVVLEDKLTDQGYTEAEIVEKLQEARRTLEATYASEASGGPTAIVAAEKKV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKEKQ +TFRAALG+G    + E
Sbjct: 121 SDTQTHQIAARKEKQMETFRAALGIGLTKQNSE 153

[Close]

BLAST of MELO3C011206 vs. NCBI nr
Match: gi|702439913|ref|XP_010023445.1| (PREDICTED: serine/arginine repetitive matrix protein 2 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 98/153 (64.05%), Postives = 116/153 (75.82%), Query Frame = 1


Query: 1   MNNRIGLQTARGSGTNGYIQTNKFFVRSN----AESTRGFE-DQATACLLKKPNKDILEH 60
           M N IGLQT RGSGTNGYIQTN+FFV++     AE+TRGFE DQ TA + KKPNKDILEH
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQTNRFFVKTKTGRVAETTRGFEGDQGTAGVSKKPNKDILEH 60

Query: 61  DRKRQIELKLFILEDELSDQGFTEKEIFGKLREARENLEA--------ASSAILLADKRL 120
           DRKRQIELKL +LED+L+DQG+TE EI  KL+EAR  LEA          +AI+ A+K++
Sbjct: 61  DRKRQIELKLVVLEDKLTDQGYTEAEIVEKLQEARRTLEATYASEASGGPTAIVAAEKKV 120

Query: 121 SDTHIHQIAARKEKQTKTFRAALGLGSLLDDGE 141
           SDT  HQIAARKEKQ +TFRAALG+G    + E
Sbjct: 121 SDTQTHQIAARKEKQMETFRAALGIGLTKQNSE 153

The following BLAST results are available for this feature:

BLAST of MELO3C011206 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRRM2_HUMAN	7.9e-17	36.49	Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2	[more]
SRRM2_MOUSE	1.4e-16	36.49	Serine/arginine repetitive matrix protein 2 OS=Mus musculus GN=Srrm2 PE=1 SV=3	[more]
CWC21_NEUCR	1.3e-14	34.46	Pre-mRNA-splicing factor cwc-21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2...	[more]
CWC21_GIBZE	4.1e-13	32.17	Pre-mRNA-splicing factor CWC21 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 /...	[more]
CWC21_CRYNB	3.5e-12	32.89	Pre-mRNA-splicing factor CWC21 OS=Cryptococcus neoformans var. neoformans seroty...	[more]

BLAST of MELO3C011206 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ00_CUCSA	2.7e-48	75.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379180 PE=4 SV=1	[more]
A0A059B0Q8_EUCGR	8.5e-42	64.05	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02470 PE=4 SV=1	[more]
A0A067KD23_JATCU	2.3e-39	60.63	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07697 PE=4 SV=1	[more]
M5XQ36_PRUPE	2.3e-39	62.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001581mg PE=4 SV=1	[more]
W9R9Q3_9ROSA	2.0e-38	64.08	Protein arginine N-methyltransferase 1.5 OS=Morus notabilis GN=L484_014903 PE=3 ...	[more]

BLAST of MELO3C011206 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49601.1	1.7e-38	63.31	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of MELO3C011206 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088696\|ref\|XP_008445113.1\|	2.3e-72	100.00	PREDICTED: pre-mRNA-splicing factor cwc-21-like [Cucumis melo]	[more]
gi\|659088679\|ref\|XP_008445109.1\|	1.8e-48	75.82	PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]	[more]
gi\|449442210\|ref\|XP_004138875.1\|	3.9e-48	75.16	PREDICTED: dentin sialophosphoprotein [Cucumis sativus]	[more]
gi\|702439905\|ref\|XP_010023443.1\|	1.2e-41	64.05	PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1 [Eucalyptus ...	[more]
gi\|702439913\|ref\|XP_010023445.1\|	1.2e-41	64.05	PREDICTED: serine/arginine repetitive matrix protein 2 isoform X2 [Eucalyptus gr...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013170	mRNA_splic_Cwf21_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0035246	peptidyl-arginine N-methylation
biological_process	GO:0032259	methylation
biological_process	GO:0006479	protein methylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016740	transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU65976	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011206T1	MELO3C011206T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU65976	MU65976	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013170	mRNA splicing factor Cwf21 domain	PFAM	PF08312	cwf21	coord: 53..94 score: 9.0
IPR013170	mRNA splicing factor Cwf21 domain	SMART	SM01115	cwf21_2	coord: 53..98 score: 8.
None	No IPR available	unknown	Coil	Coil	coord: 86..106 scor
None	No IPR available	PANTHER	PTHR32093	FAMILY NOT NAMED	coord: 1..82 score: 1.8
None	No IPR available	PANTHER	PTHR32093:SF13	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 2	coord: 1..82 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C011206	Csa2G379180	Cucumber (Chinese Long) v2	cumeB117
MELO3C011206	Cla022271	Watermelon (97103) v1	mewmB307
MELO3C011206	ClCG08G012810	Watermelon (Charleston Gray)	mewcgB299
MELO3C011206	Cla97C08G156080	Watermelon (97103) v2	mewmbB306
MELO3C011206	Bhi04G000848	Wax gourd	mewgoB324
MELO3C011206	CSPI02G22930	Wild cucumber (PI 183967)	cpimeB118
MELO3C011206	Cucsa.161920	Cucumber (Gy14) v1	cgymeB276
MELO3C011206	CmaCh12G002790	Cucurbita maxima (Rimu)	cmameB159
MELO3C011206	CmoCh05G006680	Cucurbita moschata (Rifu)	cmomeB719
MELO3C011206	CmoCh12G002330	Cucurbita moschata (Rifu)	cmomeB149
MELO3C011206	Cp4.1LG07g02000	Cucurbita pepo (Zucchini)	cpemeB757
MELO3C011206	Cp4.1LG11g05680	Cucurbita pepo (Zucchini)	cpemeB092
MELO3C011206	CsGy2G022680	Cucumber (Gy14) v2	cgybmeB102
MELO3C011206	Carg08328	Silver-seed gourd	carmeB0058
MELO3C011206	Carg03871	Silver-seed gourd	carmeB0954
MELO3C011206	CsaV3_2G031560	Cucumber (Chinese Long) v3	cucmeB124

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C011206	Cucumber (Chinese Long) v3	cucmeB199
MELO3C011206	Watermelon (97103) v2	mewmbB294
MELO3C011206	Wax gourd	mewgoB365
MELO3C011206	Melon (DHL92) v3.5.1	memeB122
MELO3C011206	Cucumber (Gy14) v1	cgymeB513
MELO3C011206	Cucurbita maxima (Rimu)	cmameB024
MELO3C011206	Cucurbita maxima (Rimu)	cmameB162
MELO3C011206	Cucurbita maxima (Rimu)	cmameB409
MELO3C011206	Cucurbita maxima (Rimu)	cmameB728
MELO3C011206	Cucurbita moschata (Rifu)	cmomeB013
MELO3C011206	Cucurbita moschata (Rifu)	cmomeB151
MELO3C011206	Cucurbita moschata (Rifu)	cmomeB402
MELO3C011206	Wild cucumber (PI 183967)	cpimeB193
MELO3C011206	Cucumber (Chinese Long) v2	cumeB201
MELO3C011206	Watermelon (Charleston Gray)	mewcgB288
MELO3C011206	Watermelon (97103) v1	mewmB318
MELO3C011206	Cucurbita pepo (Zucchini)	cpemeB513
MELO3C011206	Cucurbita pepo (Zucchini)	cpemeB719
MELO3C011206	Cucurbita pepo (Zucchini)	cpemeB761
MELO3C011206	Bottle gourd (USVL1VR-Ls)	lsimeB298
MELO3C011206	Bottle gourd (USVL1VR-Ls)	lsimeB474
MELO3C011206	Cucumber (Gy14) v2	cgybmeB167
MELO3C011206	Silver-seed gourd	carmeB0556
MELO3C011206	Silver-seed gourd	carmeB0628
MELO3C011206	Silver-seed gourd	carmeB0955