MU63462 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU63462
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNiemann-Pick C1
Locationchr7 : 347389 .. 350129 (+)
Sequence length848
The following sequences are available for this feature:

transcribed_cluster sequence

ATTTTTTATTCACTAGACTATGAAAACGGTGTTATTCAAGCATCTTCTTTCAGAACATACCATACGCCCCTGAATAAGCAGGTTGACTATATTAATTCGATGAGGGCTGCTCAAGAATTGAGTTCGAGGCTTTCTGATTCTTTGAAGATAGAGATCTTTCCCTACTCTGTATTTTACATGTTTTTTGAGCAATACCTCAATATATGGAGGACAGCGTTGATCAACCTTGCCATTGCTATTGGTGCGGTTTTTATTGTATGCCTGATCATTACATGCAGCTTATGGACCTCGGCTATCATCTTGTTGGTGTTGGCAATGATTATTGTGGATCTTATGGGCGTGATGGCAATTTTGAATATCCAATTGAACGCAATCTCTGTCGTCAATCTTGTCATGTCTGTGGGAATTGCTGTTGAATTTTGTGTGCATTTGACACATGCTTTCTCGGTAAGCAGCGGAGATAGAAATCAACGGATGAAGGAGGCTCTTAGTACAATGGGAGCATCTGTTCTTAGTGGAATCACACTAACAAAGCTAGTCGGGGTCCTTGTACTTTGCTTCTCTAGGACAGAAGTTTTTGTGGTCTATTATTTCCATGTGTACTTGGCATTAGTACTTCTTGGATTTTTGCACGGCCTCGTATTCTTGCCGGTAGTGTTGAGCTTGTTCGGTCCACCTTCAAGATGTGTATTCGTCGAGCAACAGGACAATCGGCCCTCTACTTCGTCTCGGTCATAAAGAGTTATAATTGAATTTGCATCACAGATGAACAGCCAAAGAGGGTTCCGTAGGCCTTTGAAGGTTTGGCGCACTCATTCATTGGCACACATGCTTAAACGCCAATAAAG
Library categoryESTs
melon CM-PEa library1
BLAST of MU63462 vs. Swiss-Prot
Match: NPC1_HUMAN (Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 7.0e-41
Identity = 84/194 (43.30%), Postives = 130/194 (67.01%), Query Frame = 1

Query: 34   IQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIE-----IFPYSVFYMFFEQYL 93
            + A+ F TYHT L    D+I++++ A+ ++S +++++ I      +FPYSVFY+F+EQYL
Sbjct: 1033 VGATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYL 1092

Query: 94   NIWRTALINLAIAIGAVFIVCLIIT-CSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 153
             I    + NL +++GA+F+V +++  C LW++               GVM +  I LNA+
Sbjct: 1093 TIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAV 1152

Query: 154  SVVNLVMSVGIAVEFCVHLTHAFSVS-SGDRNQRMKEALSTMGASVLSGITLTKLVGVLV 213
            S+VNLVMS GI+VEFC H+T AF+VS  G R +R +EAL+ MG+SV SGITLTK  G++V
Sbjct: 1153 SLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVV 1212

Query: 214  LCFSRTEVFVVYYF 273
            L F+++++F ++YF
Sbjct: 1213 LAFAKSQIFQIFYF 1226

Query: 274  333
            
Sbjct: 1273 1226

Query: 334  393
            
Sbjct: 1333 1226

Query: 394  453
            
Sbjct: 1393 1226

Query: 454  513
            
Sbjct: 1453 1226

Query: 514  573
            
Sbjct: 1513 1226

Query: 574  595
            
Sbjct: 1573 1226

BLAST of MU63462 vs. Swiss-Prot
Match: NPC1_MOUSE (Niemann-Pick C1 protein OS=Mus musculus GN=Npc1 PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 9.1e-41
Identity = 84/194 (43.30%), Postives = 131/194 (67.53%), Query Frame = 1

Query: 34   IQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIE-----IFPYSVFYMFFEQYL 93
            I A+ F TYHT L    DY ++M+ A+ ++S ++++++ +     +FPYSVFY+F+EQYL
Sbjct: 1032 IGATYFMTYHTILKTSADYTDAMKKARLIASNITETMRSKGSDYRVFPYSVFYVFYEQYL 1091

Query: 94   NIWRTALINLAIAIGAVFIVCLIIT-CSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 153
             I    + NL++++G++F+V L++  C LW++               GVM +  I LNA+
Sbjct: 1092 TIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGVMWLWGISLNAV 1151

Query: 154  SVVNLVMSVGIAVEFCVHLTHAFSVSS-GDRNQRMKEALSTMGASVLSGITLTKLVGVLV 213
            S+VNLVMS GI+VEFC H+T AF++S+ G R  R +EAL+ MG+SV SGITLTK  G++V
Sbjct: 1152 SLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSGITLTKFGGIVV 1211

Query: 214  LCFSRTEVFVVYYF 273
            L F+++++F ++YF
Sbjct: 1212 LAFAKSQIFEIFYF 1225

Query: 274  333
            
Sbjct: 1272 1225

Query: 334  393
            
Sbjct: 1332 1225

Query: 394  453
            
Sbjct: 1392 1225

Query: 454  513
            
Sbjct: 1452 1225

Query: 514  573
            
Sbjct: 1512 1225

Query: 574  595
            
Sbjct: 1572 1225

BLAST of MU63462 vs. Swiss-Prot
Match: NPC1_PIG (Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-40
Identity = 83/194 (42.78%), Postives = 129/194 (66.49%), Query Frame = 1

Query: 34   IQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIE-----IFPYSVFYMFFEQYL 93
            + A+ F TYHT L    D+I++M+ A+ ++S ++ ++ +E     +FPYSVFY+F+EQYL
Sbjct: 1032 VGATYFMTYHTVLQASADFIDAMQKARLIASNITRTMGLEASSYRVFPYSVFYVFYEQYL 1091

Query: 94   NIWRTALINLAIAIGAVFIVCLIIT-CSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 153
             +    + NL +++GA+F+V +++  C LW +               GVM +  I LNA+
Sbjct: 1092 TVIDDTIFNLGVSLGAIFLVTVVLMGCELWATVIMCVTIAMILVNMFGVMWLWGISLNAV 1151

Query: 154  SVVNLVMSVGIAVEFCVHLTHAFSVSS-GDRNQRMKEALSTMGASVLSGITLTKLVGVLV 213
            S+VNLVMS GI+VEFC H+T AF++S+ G R  R +EAL+ MG+SV SGITLTK  G++V
Sbjct: 1152 SLVNLVMSCGISVEFCSHITRAFTLSTKGSRVDRAEEALAHMGSSVFSGITLTKFGGIVV 1211

Query: 214  LCFSRTEVFVVYYF 273
            L F+++++F ++YF
Sbjct: 1212 LAFAKSQIFQIFYF 1225

Query: 274  333
            
Sbjct: 1272 1225

Query: 334  393
            
Sbjct: 1332 1225

Query: 394  453
            
Sbjct: 1392 1225

Query: 454  513
            
Sbjct: 1452 1225

Query: 514  573
            
Sbjct: 1512 1225

Query: 574  595
            
Sbjct: 1572 1225

BLAST of MU63462 vs. Swiss-Prot
Match: NPC1_YEAST (Niemann-Pick type C-related protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NCR1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.5e-30
Identity = 73/199 (36.68%), Postives = 112/199 (56.28%), Query Frame = 1

Query: 10   SLDYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFE 69
            +L Y    + AS FRT H PL  Q D+I +      +SS   +   +++F YS FY+FF 
Sbjct: 936  ALVYNETSVSASVFRTAHHPLRSQKDFIQAYSDGVRISSSFPE---LDMFAYSPFYIFFV 995

Query: 70   QYLNIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLN 129
            QY  +    L  +  AI  +F +  +   ++ +S                +MA+L I LN
Sbjct: 996  QYQTLGPLTLKLIGSAIILIFFISSVFLQNIRSSFLLALVVTMIIVDIGALMALLGISLN 1055

Query: 130  AISVVNLVMSVGIAVEFCVHLTHAFSV----SSGDRNQRMKEALSTMGASVLSGITLTKL 189
            A+S+VNL++ VG+ VEFCVH+  +F+V    +  D N R+  +L+T+G SV+ GITLTK 
Sbjct: 1056 AVSLVNLIICVGLGVEFCVHIVRSFTVVPSETKKDANSRVLYSLNTIGESVIKGITLTKF 1115

Query: 190  VGVLVLCFSRTEVFVVYYF 249
            +GV VL F+++++F V+YF
Sbjct: 1116 IGVCVLAFAQSKIFDVFYF 1131

Query: 250  309
            
Sbjct: 1176 1131

Query: 310  369
            
Sbjct: 1236 1131

Query: 370  429
            
Sbjct: 1296 1131

Query: 430  489
            
Sbjct: 1356 1131

Query: 490  549
            
Sbjct: 1416 1131

Query: 550  595
            
Sbjct: 1476 1131

BLAST of MU63462 vs. Swiss-Prot
Match: NPCL1_HUMAN (Niemann-Pick C1-like protein 1 OS=Homo sapiens GN=NPC1L1 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.8e-26
Identity = 65/194 (33.51%), Postives = 109/194 (56.19%), Query Frame = 1

Query: 43   SSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLK--------IEIFPYSVFYMFFEQYL 102
            S F  YH PL    DY  ++RAA+EL++ ++  L+         E+FPY++  +F+EQYL
Sbjct: 1074 SRFMAYHKPLKNSQDYTEALRAARELAANITADLRKVPGTDPAFEVFPYTITNVFYEQYL 1133

Query: 103  NIWRTALINLAIAIGAVFIV-CLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 162
             I    L  L++ +   F V CL++   L +                G MA+  I  NA+
Sbjct: 1134 TILPEGLFMLSLCLVPTFAVSCLLLGLDLRSGLLNLLSIVMILVDTVGFMALWGISYNAV 1193

Query: 163  SVVNLVMSVGIAVEFCVHLTHAFSVSSGDR-NQRMKEALSTMGASVLSGITLTKLVGVLV 222
            S++NLV +VG++VEF  H+T +F++S+     +R KEA  +MG++V +G+ +T L G+LV
Sbjct: 1194 SLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMGSAVFAGVAMTNLPGILV 1253

Query: 223  LCFSRTEVFVVYYF 282
            L  ++ ++  +++F
Sbjct: 1254 LGLAKAQLIQIFFF 1267

Query: 283  342
            
Sbjct: 1314 1267

Query: 343  402
            
Sbjct: 1374 1267

Query: 403  462
            
Sbjct: 1434 1267

Query: 463  522
            
Sbjct: 1494 1267

Query: 523  582
            
Sbjct: 1554 1267

Query: 583  595
            
Sbjct: 1614 1267

BLAST of MU63462 vs. TrEMBL
Match: A0A0A0L4L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658620 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.4e-103
Identity = 202/240 (84.17%), Postives = 203/240 (84.58%), Query Frame = 1

Query: 16   DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 75
            DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY
Sbjct: 1054 DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 1113

Query: 76   LNIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 135
            LNIWRTALINLAIAIGAVFIVCLIITCSLWTS               GVMAILNIQLNAI
Sbjct: 1114 LNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAI 1173

Query: 136  SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 195
            SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL
Sbjct: 1174 SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 1233

Query: 196  CFSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSRS 255
            CFSRTEVFVVYYF                      SLFGPPSRCVFVEQQDNRPSTSS+S
Sbjct: 1234 CFSRTEVFVVYYFHVYLALVLLGFLHGLVFLPVVLSLFGPPSRCVFVEQQDNRPSTSSQS 1293

Query: 256  315
            
Sbjct: 1294 1293

Query: 316  375
            
Sbjct: 1354 1293

Query: 376  435
            
Sbjct: 1414 1293

Query: 436  495
            
Sbjct: 1474 1293

Query: 496  555
            
Sbjct: 1534 1293

Query: 556  615
            
Sbjct: 1594 1293

Query: 616  675
            
Sbjct: 1654 1293

Query: 676  735
            
Sbjct: 1714 1293

BLAST of MU63462 vs. TrEMBL
Match: A0A068UFF5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024510001 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.4e-93
Identity = 176/238 (73.95%), Postives = 195/238 (81.93%), Query Frame = 1

Query: 19   YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
            YE+GVI+AS+FRTYHTPLNKQ DY+NSMRAA++ SSR+SDSLKIEIFPY+VFYMFFEQYL
Sbjct: 1057 YEDGVIRASAFRTYHTPLNKQTDYVNSMRAARDFSSRVSDSLKIEIFPYAVFYMFFEQYL 1116

Query: 79   NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
            NIWRTA+INL IAIGAVFIVCL+ITCSLWTS               GVMAILNIQLNA+S
Sbjct: 1117 NIWRTAIINLVIAIGAVFIVCLVITCSLWTSAIILLVLAMIVVDLMGVMAILNIQLNAVS 1176

Query: 139  VVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLC 198
            VVNLVMSVGIAVEFCVH+THAF VSSGDRNQRMK+AL+TMGASV SGITLTKLVGVLVLC
Sbjct: 1177 VVNLVMSVGIAVEFCVHITHAFLVSSGDRNQRMKDALTTMGASVFSGITLTKLVGVLVLC 1236

Query: 199  FSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSR 258
            FSRTEVFVVYYF                      SLFGPPSRCV +E+Q++RPSTSS+
Sbjct: 1237 FSRTEVFVVYYFKMYLALVLLGFLHGLVFLPVLLSLFGPPSRCVLIEKQEDRPSTSSQ 1294

Query: 259  318
            
Sbjct: 1297 1294

Query: 319  378
            
Sbjct: 1357 1294

Query: 379  438
            
Sbjct: 1417 1294

Query: 439  498
            
Sbjct: 1477 1294

Query: 499  558
            
Sbjct: 1537 1294

Query: 559  618
            
Sbjct: 1597 1294

Query: 619  678
            
Sbjct: 1657 1294

Query: 679  733
            
Sbjct: 1717 1294

BLAST of MU63462 vs. TrEMBL
Match: M1AM78_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009984 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.1e-92
Identity = 175/238 (73.53%), Postives = 196/238 (82.35%), Query Frame = 1

Query: 19  YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
           YE+G+I+AS+FRTYHTPLNKQVDY+NSMRAA+E SSR+SDSLK+E+FPY+VFYMFFEQYL
Sbjct: 346 YEDGIIKASAFRTYHTPLNKQVDYVNSMRAAREFSSRVSDSLKMEVFPYAVFYMFFEQYL 405

Query: 79  NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
           +IWRTALINLAIAIGAVFIVCLIITCS WTS               GVMAILNIQLNA+S
Sbjct: 406 SIWRTALINLAIAIGAVFIVCLIITCSFWTSAIILLVLTMIVLDLMGVMAILNIQLNAVS 465

Query: 139 VVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLC 198
           VVNLVM+VGIAVEFCVH+THAF VSSGDRNQRMKEAL+TMGASV SGITLTKLVGV+VLC
Sbjct: 466 VVNLVMAVGIAVEFCVHITHAFLVSSGDRNQRMKEALTTMGASVFSGITLTKLVGVIVLC 525

Query: 199 FSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSR 258
           FSRTEVFVVYYF                      S+FGPPSRCV VE+Q++RPSTSS+
Sbjct: 526 FSRTEVFVVYYFQMYLALVLLGFLHGLIFLPVLLSIFGPPSRCVLVEKQEDRPSTSSQ 583

Query: 259 318
           
Sbjct: 586 583

Query: 319 378
           
Sbjct: 646 583

Query: 379 438
           
Sbjct: 706 583

Query: 439 498
           
Sbjct: 766 583

Query: 499 558
           
Sbjct: 826 583

Query: 559 618
           
Sbjct: 886 583

Query: 619 678
           
Sbjct: 946 583

Query: 679 733
           
Sbjct: 1006 583

BLAST of MU63462 vs. TrEMBL
Match: M1AM77_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009984 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.1e-92
Identity = 175/238 (73.53%), Postives = 196/238 (82.35%), Query Frame = 1

Query: 19  YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
           YE+G+I+AS+FRTYHTPLNKQVDY+NSMRAA+E SSR+SDSLK+E+FPY+VFYMFFEQYL
Sbjct: 95  YEDGIIKASAFRTYHTPLNKQVDYVNSMRAAREFSSRVSDSLKMEVFPYAVFYMFFEQYL 154

Query: 79  NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
           +IWRTALINLAIAIGAVFIVCLIITCS WTS               GVMAILNIQLNA+S
Sbjct: 155 SIWRTALINLAIAIGAVFIVCLIITCSFWTSAIILLVLTMIVLDLMGVMAILNIQLNAVS 214

Query: 139 VVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLC 198
           VVNLVM+VGIAVEFCVH+THAF VSSGDRNQRMKEAL+TMGASV SGITLTKLVGV+VLC
Sbjct: 215 VVNLVMAVGIAVEFCVHITHAFLVSSGDRNQRMKEALTTMGASVFSGITLTKLVGVIVLC 274

Query: 199 FSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSR 258
           FSRTEVFVVYYF                      S+FGPPSRCV VE+Q++RPSTSS+
Sbjct: 275 FSRTEVFVVYYFQMYLALVLLGFLHGLIFLPVLLSIFGPPSRCVLVEKQEDRPSTSSQ 332

Query: 259 318
           
Sbjct: 335 332

Query: 319 378
           
Sbjct: 395 332

Query: 379 438
           
Sbjct: 455 332

Query: 439 498
           
Sbjct: 515 332

Query: 499 558
           
Sbjct: 575 332

Query: 559 618
           
Sbjct: 635 332

Query: 619 678
           
Sbjct: 695 332

Query: 679 733
           
Sbjct: 755 332

BLAST of MU63462 vs. TrEMBL
Match: K4BVX6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.4e-91
Identity = 173/238 (72.69%), Postives = 195/238 (81.93%), Query Frame = 1

Query: 19   YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
            YE+G+I+AS+FRTYHTPLNKQVDY+NSMRAA+E SSR+SDSLK+E+FPY+VFYMFFEQYL
Sbjct: 1056 YEDGIIKASAFRTYHTPLNKQVDYVNSMRAAREFSSRVSDSLKMEVFPYAVFYMFFEQYL 1115

Query: 79   NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
            +IWRTALINLAIAIGAVFIVCL+ITCS WTS               GVMAIL IQLNA+S
Sbjct: 1116 SIWRTALINLAIAIGAVFIVCLVITCSFWTSAIILLVLTMIVLDLMGVMAILKIQLNAVS 1175

Query: 139  VVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLC 198
            VVNLVM+VGIAVEFCVH+THAF VSSGDRNQRMKEAL+TMGASV SGITLTKLVGV+VLC
Sbjct: 1176 VVNLVMAVGIAVEFCVHITHAFLVSSGDRNQRMKEALTTMGASVFSGITLTKLVGVIVLC 1235

Query: 199  FSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSR 258
            FSRTEVFVVYYF                      S+FGPPSRCV VE+Q++RPSTSS+
Sbjct: 1236 FSRTEVFVVYYFQMYLALVLLGFLHGLIFLPVLLSIFGPPSRCVLVEKQEDRPSTSSQ 1293

Query: 259  318
            
Sbjct: 1296 1293

Query: 319  378
            
Sbjct: 1356 1293

Query: 379  438
            
Sbjct: 1416 1293

Query: 439  498
            
Sbjct: 1476 1293

Query: 499  558
            
Sbjct: 1536 1293

Query: 559  618
            
Sbjct: 1596 1293

Query: 619  678
            
Sbjct: 1656 1293

Query: 679  733
            
Sbjct: 1716 1293

BLAST of MU63462 vs. TAIR10
Match: AT4G38350.2 (AT4G38350.2 Patched family protein)

HSP 1 Score: 285.4 bits (729), Expect = 3.8e-77
Identity = 145/237 (61.18%), Postives = 171/237 (72.15%), Query Frame = 1

Query: 19   YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
            YE+GVIQAS FRTYHTPLN Q DY+N++RAA+E SSR+S+SLKI+IFPYSVFY+FFEQYL
Sbjct: 1058 YESGVIQASEFRTYHTPLNTQGDYVNALRAAREFSSRISNSLKIDIFPYSVFYIFFEQYL 1117

Query: 79   NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
            NIW  AL NLAIAIGA+FIVC +IT S W+S               G+M IL IQLNA+S
Sbjct: 1118 NIWTVALTNLAIAIGAIFIVCWLITSSAWSSAIIVLVLVMILVDLMGMMVILGIQLNAVS 1177

Query: 139  VVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLC 198
            VVNL+MS+GIAVEFCVH++HAF +SSGDR  R +EAL TMGASV SGITLTKLVGV+VLC
Sbjct: 1178 VVNLIMSIGIAVEFCVHISHAFLMSSGDREHRAREALETMGASVFSGITLTKLVGVIVLC 1237

Query: 199  FSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSS 258
            F+R+E+FVVYYF                      SL GPP   + +EQQ    ++SS
Sbjct: 1238 FARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLAGPPQLNLDIEQQQTDEASSS 1294

Query: 259  318
            
Sbjct: 1298 1294

Query: 319  378
            
Sbjct: 1358 1294

Query: 379  438
            
Sbjct: 1418 1294

Query: 439  498
            
Sbjct: 1478 1294

Query: 499  558
            
Sbjct: 1538 1294

Query: 559  618
            
Sbjct: 1598 1294

Query: 619  678
            
Sbjct: 1658 1294

Query: 679  730
            
Sbjct: 1718 1294

BLAST of MU63462 vs. TAIR10
Match: AT1G42470.1 (AT1G42470.1 Patched family protein)

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-56
Identity = 104/143 (72.73%), Postives = 120/143 (83.92%), Query Frame = 1

Query: 19   YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
            Y NG+IQASSFRTYHTPLNKQVD++NSMRAAQE S+++S SLK+EI+PYSVFYMFFEQYL
Sbjct: 1023 YANGIIQASSFRTYHTPLNKQVDFVNSMRAAQEFSAKVSRSLKMEIYPYSVFYMFFEQYL 1082

Query: 79   NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
            +IW+TALINL+IAI AVF+VCLIITCS W+S               GVMA+ +IQLNA+S
Sbjct: 1083 DIWKTALINLSIAIAAVFVVCLIITCSFWSSAIILLVIAMIIIDLLGVMAVFHIQLNALS 1142

Query: 139  VVNLVMSVGIAVEFCVHLTHAFS 198
            VVNL+MSVGIAVEFCVH+THAFS
Sbjct: 1143 VVNLIMSVGIAVEFCVHITHAFS 1165

Query: 199  258
            
Sbjct: 1203 1165

Query: 259  318
            
Sbjct: 1263 1165

Query: 319  378
            
Sbjct: 1323 1165

Query: 379  438
            
Sbjct: 1383 1165

Query: 439  448
            
Sbjct: 1443 1165


HSP 2 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 34/91 (37.36%), Postives = 43/91 (47.25%), Query Frame = 3

Query: 465  KSTDEGGS*YNGSICS*WNHTNKASRGPCTLLL*DRSFCGLLFPCVLGISTSWIFARPRI 524
            K +DE G  ++GS    WN+ ++ S G C   L  RS CG+L   V G S S    RP I
Sbjct: 1170 KPSDERGVGWDGSFSFQWNYIDETSWGDCARFLKIRSLCGVLLQDVFGTSPSRFLTRPCI 1229

Query: 525  LAGSVELVRSTFKMCIRRATGQSALYFVSVI 584
              G +E V S+ K C R     S   F+S +
Sbjct: 1230 FTGVLEHVWSSSKTCRRGKARSSTFGFISTL 1260

Query: 585  644
            
Sbjct: 1290 1260

Query: 645  704
            
Sbjct: 1350 1260

Query: 705  738
            
Sbjct: 1410 1260

BLAST of MU63462 vs. NCBI nr
Match: gi|659104696|ref|XP_008452964.1| (PREDICTED: Niemann-Pick C1 protein isoform X1 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 6.6e-100
Identity = 203/240 (84.58%), Postives = 203/240 (84.58%), Query Frame = 1

Query: 16   DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 75
            DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY
Sbjct: 1054 DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 1113

Query: 76   LNIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 135
            LNIWRTALINLAIAIGAVFIVCLIITCSLWTS               GVMAILNIQLNAI
Sbjct: 1114 LNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAI 1173

Query: 136  SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 195
            SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL
Sbjct: 1174 SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 1233

Query: 196  CFSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSRS 255
            CFSRTEVFVVYYF                      SLFGPPSRCVFVEQQDNRPSTSSRS
Sbjct: 1234 CFSRTEVFVVYYFHVYLALVLLGFLHGLVFLPVVLSLFGPPSRCVFVEQQDNRPSTSSRS 1293

Query: 256  315
            
Sbjct: 1294 1293

Query: 316  375
            
Sbjct: 1354 1293

Query: 376  435
            
Sbjct: 1414 1293

Query: 436  495
            
Sbjct: 1474 1293

Query: 496  555
            
Sbjct: 1534 1293

Query: 556  615
            
Sbjct: 1594 1293

Query: 616  675
            
Sbjct: 1654 1293

Query: 676  735
            
Sbjct: 1714 1293

BLAST of MU63462 vs. NCBI nr
Match: gi|659104698|ref|XP_008452965.1| (PREDICTED: Niemann-Pick C1 protein isoform X2 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 6.6e-100
Identity = 203/240 (84.58%), Postives = 203/240 (84.58%), Query Frame = 1

Query: 16   DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 75
            DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY
Sbjct: 947  DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 1006

Query: 76   LNIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 135
            LNIWRTALINLAIAIGAVFIVCLIITCSLWTS               GVMAILNIQLNAI
Sbjct: 1007 LNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAI 1066

Query: 136  SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 195
            SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL
Sbjct: 1067 SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 1126

Query: 196  CFSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSRS 255
            CFSRTEVFVVYYF                      SLFGPPSRCVFVEQQDNRPSTSSRS
Sbjct: 1127 CFSRTEVFVVYYFHVYLALVLLGFLHGLVFLPVVLSLFGPPSRCVFVEQQDNRPSTSSRS 1186

Query: 256  315
            
Sbjct: 1187 1186

Query: 316  375
            
Sbjct: 1247 1186

Query: 376  435
            
Sbjct: 1307 1186

Query: 436  495
            
Sbjct: 1367 1186

Query: 496  555
            
Sbjct: 1427 1186

Query: 556  615
            
Sbjct: 1487 1186

Query: 616  675
            
Sbjct: 1547 1186

Query: 676  735
            
Sbjct: 1607 1186

BLAST of MU63462 vs. NCBI nr
Match: gi|778697176|ref|XP_011654272.1| (PREDICTED: Niemann-Pick C1 protein isoform X2 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.9e-99
Identity = 202/240 (84.17%), Postives = 203/240 (84.58%), Query Frame = 1

Query: 16   DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 75
            DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY
Sbjct: 947  DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 1006

Query: 76   LNIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 135
            LNIWRTALINLAIAIGAVFIVCLIITCSLWTS               GVMAILNIQLNAI
Sbjct: 1007 LNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAI 1066

Query: 136  SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 195
            SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL
Sbjct: 1067 SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 1126

Query: 196  CFSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSRS 255
            CFSRTEVFVVYYF                      SLFGPPSRCVFVEQQDNRPSTSS+S
Sbjct: 1127 CFSRTEVFVVYYFHVYLALVLLGFLHGLVFLPVVLSLFGPPSRCVFVEQQDNRPSTSSQS 1186

Query: 256  315
            
Sbjct: 1187 1186

Query: 316  375
            
Sbjct: 1247 1186

Query: 376  435
            
Sbjct: 1307 1186

Query: 436  495
            
Sbjct: 1367 1186

Query: 496  555
            
Sbjct: 1427 1186

Query: 556  615
            
Sbjct: 1487 1186

Query: 616  675
            
Sbjct: 1547 1186

Query: 676  735
            
Sbjct: 1607 1186

BLAST of MU63462 vs. NCBI nr
Match: gi|778697173|ref|XP_011654271.1| (PREDICTED: Niemann-Pick C1 protein isoform X1 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.9e-99
Identity = 202/240 (84.17%), Postives = 203/240 (84.58%), Query Frame = 1

Query: 16   DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 75
            DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY
Sbjct: 1054 DYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQY 1113

Query: 76   LNIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAI 135
            LNIWRTALINLAIAIGAVFIVCLIITCSLWTS               GVMAILNIQLNAI
Sbjct: 1114 LNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAI 1173

Query: 136  SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 195
            SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL
Sbjct: 1174 SVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVL 1233

Query: 196  CFSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSRS 255
            CFSRTEVFVVYYF                      SLFGPPSRCVFVEQQDNRPSTSS+S
Sbjct: 1234 CFSRTEVFVVYYFHVYLALVLLGFLHGLVFLPVVLSLFGPPSRCVFVEQQDNRPSTSSQS 1293

Query: 256  315
            
Sbjct: 1294 1293

Query: 316  375
            
Sbjct: 1354 1293

Query: 376  435
            
Sbjct: 1414 1293

Query: 436  495
            
Sbjct: 1474 1293

Query: 496  555
            
Sbjct: 1534 1293

Query: 556  615
            
Sbjct: 1594 1293

Query: 616  675
            
Sbjct: 1654 1293

Query: 676  735
            
Sbjct: 1714 1293

BLAST of MU63462 vs. NCBI nr
Match: gi|661888842|emb|CDP07285.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 335.9 bits (860), Expect = 6.9e-89
Identity = 176/238 (73.95%), Postives = 195/238 (81.93%), Query Frame = 1

Query: 19   YENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYL 78
            YE+GVI+AS+FRTYHTPLNKQ DY+NSMRAA++ SSR+SDSLKIEIFPY+VFYMFFEQYL
Sbjct: 1057 YEDGVIRASAFRTYHTPLNKQTDYVNSMRAARDFSSRVSDSLKIEIFPYAVFYMFFEQYL 1116

Query: 79   NIWRTALINLAIAIGAVFIVCLIITCSLWTSXXXXXXXXXXXXXXXGVMAILNIQLNAIS 138
            NIWRTA+INL IAIGAVFIVCL+ITCSLWTS               GVMAILNIQLNA+S
Sbjct: 1117 NIWRTAIINLVIAIGAVFIVCLVITCSLWTSAIILLVLAMIVVDLMGVMAILNIQLNAVS 1176

Query: 139  VVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLC 198
            VVNLVMSVGIAVEFCVH+THAF VSSGDRNQRMK+AL+TMGASV SGITLTKLVGVLVLC
Sbjct: 1177 VVNLVMSVGIAVEFCVHITHAFLVSSGDRNQRMKDALTTMGASVFSGITLTKLVGVLVLC 1236

Query: 199  FSRTEVFVVYYFXXXXXXXXXXXXXXXXXXXXXXSLFGPPSRCVFVEQQDNRPSTSSR 258
            FSRTEVFVVYYF                      SLFGPPSRCV +E+Q++RPSTSS+
Sbjct: 1237 FSRTEVFVVYYFKMYLALVLLGFLHGLVFLPVLLSLFGPPSRCVLIEKQEDRPSTSSQ 1294

Query: 259  318
            
Sbjct: 1297 1294

Query: 319  378
            
Sbjct: 1357 1294

Query: 379  438
            
Sbjct: 1417 1294

Query: 439  498
            
Sbjct: 1477 1294

Query: 499  558
            
Sbjct: 1537 1294

Query: 559  618
            
Sbjct: 1597 1294

Query: 619  678
            
Sbjct: 1657 1294

Query: 679  733
            
Sbjct: 1717 1294

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
NPC1_HUMAN7.0e-4143.30Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2[more]
NPC1_MOUSE9.1e-4143.30Niemann-Pick C1 protein OS=Mus musculus GN=Npc1 PE=1 SV=2[more]
NPC1_PIG2.7e-4042.78Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1[more]
NPC1_YEAST9.5e-3036.68Niemann-Pick type C-related protein 1 OS=Saccharomyces cerevisiae (strain ATCC 2... [more]
NPCL1_HUMAN2.8e-2633.51Niemann-Pick C1-like protein 1 OS=Homo sapiens GN=NPC1L1 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0L4L2_CUCSA3.4e-10384.17Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658620 PE=4 SV=1[more]
A0A068UFF5_COFCA9.4e-9373.95Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024510001 PE=4 SV=1[more]
M1AM78_SOLTU2.1e-9273.53Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009984 PE=4 SV=1[more]
M1AM77_SOLTU2.1e-9273.53Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009984 PE=4 SV=1[more]
K4BVX6_SOLLC1.4e-9172.69Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G38350.23.8e-7761.18 Patched family protein[more]
AT1G42470.11.3e-5672.73 Patched family protein[more]
Match NameE-valueIdentityDescription
gi|659104696|ref|XP_008452964.1|6.6e-10084.58PREDICTED: Niemann-Pick C1 protein isoform X1 [Cucumis melo][more]
gi|659104698|ref|XP_008452965.1|6.6e-10084.58PREDICTED: Niemann-Pick C1 protein isoform X2 [Cucumis melo][more]
gi|778697176|ref|XP_011654272.1|1.9e-9984.17PREDICTED: Niemann-Pick C1 protein isoform X2 [Cucumis sativus][more]
gi|778697173|ref|XP_011654271.1|1.9e-9984.17PREDICTED: Niemann-Pick C1 protein isoform X1 [Cucumis sativus][more]
gi|661888842|emb|CDP07285.1|6.9e-8973.95unnamed protein product [Coffea canephora][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C017026MELO3C017026gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
PEa0012P05PEa0012P05EST