MU62463 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU62463
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLow temperature and salt responsive protein
Locationchr2 : 180326 .. 181066 (+)
Sequence length474
The following sequences are available for this feature:

transcribed_cluster sequence

ACCTTCATCACTACCCATTACCTCATTCCAATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACTCTCTGTTTGTTATGTTTTGTGCAAATCAGAAGAAGAAGAAGAAAGAAAAGGAAAATGGCAGACGAACGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATTTGGATGCCAAGTTGAGTTTTGGATCTGCTTGGTCCTAACTTTCTTTGGTTACATCCGTGGGATTATTTATGCTGTTTATGCGATCACCAAGTGATCACCGAATTCAAAGGATTGATGGAAGGAATTATTGGAACTCATCATCATGGTCTCTCCTCACCGACACTCTCCCCTGCTTTTTCTATTTTCCTTTTTGCTAATTTCTGTTGATCTCTGTTTTGTGTGTGTGCTTGTGTGATAATCATCCCATCCAGCACAGACATCTACACA
Library categoryESTs
melon DFTP2 library1
BLAST of MU62463 vs. Swiss-Prot
Match: LTI6B_ORYSJ (Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-13
Identity = 35/52 (67.31%), Postives = 35/52 (67.31%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 202
           T NCID          GVFLKFGC  EFWICL+LTF GYI GIIYA+YAITK
Sbjct: 4   TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55

Query: 203 262
           
Sbjct: 64  55

Query: 263 299
           
Sbjct: 124 55

BLAST of MU62463 vs. Swiss-Prot
Match: LTI6B_ORYSI (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-13
Identity = 35/52 (67.31%), Postives = 35/52 (67.31%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 202
           T NCID          GVFLKFGC  EFWICL+LTF GYI GIIYA+YAITK
Sbjct: 4   TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55

Query: 203 262
           
Sbjct: 64  55

Query: 263 299
           
Sbjct: 124 55

BLAST of MU62463 vs. Swiss-Prot
Match: LTI6A_ORYSJ (Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 35/57 (61.40%), Postives = 37/57 (64.91%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MAD  T  CID          GVF KFGC +EFWICL+LTFFGY+ GIIYAV+ ITK
Sbjct: 1   MADS-TATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVITK 56

Query: 188 247
           
Sbjct: 61  56

Query: 248 299
           
Sbjct: 121 56

BLAST of MU62463 vs. Swiss-Prot
Match: RCI2B_ARATH (Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.3e-11
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 250
           GVFLKFGC+VEFWICL+LT FGY+ GI+YA+Y ITK
Sbjct: 19  GVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

Query: 251 299
           
Sbjct: 79  54

BLAST of MU62463 vs. Swiss-Prot
Match: RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10
Identity = 30/52 (57.69%), Postives = 32/52 (61.54%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 202
           T   +D          GVFL+FGC VEFWICLVLT  GYI GIIYA+Y +TK
Sbjct: 3   TATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

Query: 203 262
           
Sbjct: 63  54

Query: 263 299
           
Sbjct: 123 54

BLAST of MU62463 vs. TrEMBL
Match: A0A0A0M1D6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560745 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-16
Identity = 45/57 (78.95%), Postives = 45/57 (78.95%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE TTNCID          GVFLKFGCQVEFWICLVLTFFGYI GIIYAVYAITK
Sbjct: 1   MADEGTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU62463 vs. TrEMBL
Match: M0RN96_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICL+LT FGY+ GIIYAVYAITK
Sbjct: 1   MADEGTVNCIDILVAILLPPLGVFLKFGCQVEFWICLLLTLFGYLPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU62463 vs. TrEMBL
Match: A0A059CWH7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03713 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14
Identity = 42/57 (73.68%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+I GIIYAVYAITK
Sbjct: 86  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 142

Query: 188 247
           
Sbjct: 146 142

Query: 248 299
           
Sbjct: 206 142

BLAST of MU62463 vs. TrEMBL
Match: A0A058ZTP7_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_L01633 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14
Identity = 42/57 (73.68%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+I GIIYAVYAITK
Sbjct: 61  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 117

Query: 188 247
           
Sbjct: 121 117

Query: 248 299
           
Sbjct: 181 117

BLAST of MU62463 vs. TrEMBL
Match: M0RSL9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-14
Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGC++EFWICL+LT FGYI GIIYAVYAITK
Sbjct: 1   MADEGTANCIDILLAIILPPLGVFLKFGCEMEFWICLLLTLFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU62463 vs. TAIR10
Match: AT3G05890.1 (AT3G05890.1 Low temperature and salt responsive protein family)

HSP 1 Score: 68.2 bits (165), Expect = 5.3e-12
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 250
           GVFLKFGC+VEFWICL+LT FGY+ GI+YA+Y ITK
Sbjct: 19  GVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

Query: 251 299
           
Sbjct: 79  54

BLAST of MU62463 vs. TAIR10
Match: AT3G05880.1 (AT3G05880.1 Low temperature and salt responsive protein family)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 30/52 (57.69%), Postives = 32/52 (61.54%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 202
           T   +D          GVFL+FGC VEFWICLVLT  GYI GIIYA+Y +TK
Sbjct: 3   TATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

Query: 203 262
           
Sbjct: 63  54

Query: 263 299
           
Sbjct: 123 54

BLAST of MU62463 vs. TAIR10
Match: AT2G38905.1 (AT2G38905.1 Low temperature and salt responsive protein family)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAI 250
           GVFL++GC VEFWICL+LT  GYI GIIYA+Y +
Sbjct: 19  GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 52

Query: 251 293
           
Sbjct: 79  52

BLAST of MU62463 vs. TAIR10
Match: AT1G57550.1 (AT1G57550.1 Low temperature and salt responsive protein family)

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-08
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 250
           GVFL++G  +EFW+CL+LT F +I G+IYA+Y +TK
Sbjct: 17  GVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52

Query: 251 299
           
Sbjct: 77  52

BLAST of MU62463 vs. TAIR10
Match: AT2G24040.1 (AT2G24040.1 Low temperature and salt responsive protein family)

HSP 1 Score: 48.5 bits (114), Expect = 4.3e-06
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 2

Query: 191 GVFLKFGC-QVEFWICLVLTFFGYIRGIIYAVYAI 250
           GV L+ GC  VEF+ICL+LT  GY+ GIIYA+YAI
Sbjct: 21  GVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55

Query: 251 293
           
Sbjct: 81  55

BLAST of MU62463 vs. NCBI nr
Match: gi|659099264|ref|XP_008450512.1| (PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-17
Identity = 46/57 (80.70%), Postives = 46/57 (80.70%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADERTTNCID          GVFLKFGCQVEFWICLVLTFFGYI GIIYAVYAITK
Sbjct: 1   MADERTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU62463 vs. NCBI nr
Match: gi|700210895|gb|KGN65991.1| (hypothetical protein Csa_1G560745 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16
Identity = 45/57 (78.95%), Postives = 45/57 (78.95%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE TTNCID          GVFLKFGCQVEFWICLVLTFFGYI GIIYAVYAITK
Sbjct: 1   MADEGTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU62463 vs. NCBI nr
Match: gi|502112986|ref|XP_004494506.1| (PREDICTED: hydrophobic protein LTI6B-like [Cicer arietinum])

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 42/57 (73.68%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGC VEFWICLVLTFFGYI GIIYA+YAITK
Sbjct: 1   MADEGTANCIDILLAILLPPLGVFLKFGCHVEFWICLVLTFFGYIPGIIYAIYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU62463 vs. NCBI nr
Match: gi|629117630|gb|KCW82305.1| (hypothetical protein EUGRSUZ_C03713 [Eucalyptus grandis])

HSP 1 Score: 86.3 bits (212), Expect = 5.3e-14
Identity = 42/57 (73.68%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+I GIIYAVYAITK
Sbjct: 86  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 142

Query: 188 247
           
Sbjct: 146 142

Query: 248 299
           
Sbjct: 206 142

BLAST of MU62463 vs. NCBI nr
Match: gi|629076871|gb|KCW44804.1| (hypothetical protein EUGRSUZ_L01633, partial [Eucalyptus grandis])

HSP 1 Score: 86.3 bits (212), Expect = 5.3e-14
Identity = 42/57 (73.68%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIRGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+I GIIYAVYAITK
Sbjct: 61  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 117

Query: 188 247
           
Sbjct: 121 117

Query: 248 299
           
Sbjct: 181 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LTI6B_ORYSJ5.9e-1367.31Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1[more]
LTI6B_ORYSI5.9e-1367.31Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2[more]
LTI6A_ORYSJ2.2e-1261.40Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1[more]
RCI2B_ARATH9.3e-1177.78Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1[more]
RCI2A_ARATH2.7e-1057.69Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0M1D6_CUCSA2.3e-1678.95Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560745 PE=4 SV=1[more]
M0RN96_MUSAM1.7e-1471.93Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A0A059CWH7_EUCGR2.2e-1473.68Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03713 PE=4 SV=1[more]
A0A058ZTP7_EUCGR2.2e-1473.68Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_L01633 PE=4 ... [more]
M0RSL9_MUSAM4.8e-1470.18Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05890.15.3e-1277.78 Low temperature and salt responsive protein family[more]
AT3G05880.11.5e-1157.69 Low temperature and salt responsive protein family[more]
AT2G38905.11.9e-0970.59 Low temperature and salt responsive protein family[more]
AT1G57550.12.7e-0858.33 Low temperature and salt responsive protein family[more]
AT2G24040.14.3e-0665.71 Low temperature and salt responsive protein family[more]
Match NameE-valueIdentityDescription
gi|659099264|ref|XP_008450512.1|8.7e-1780.70PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo][more]
gi|700210895|gb|KGN65991.1|5.7e-1678.95hypothetical protein Csa_1G560745 [Cucumis sativus][more]
gi|502112986|ref|XP_004494506.1|1.1e-1473.68PREDICTED: hydrophobic protein LTI6B-like [Cicer arietinum][more]
gi|629117630|gb|KCW82305.1|5.3e-1473.68hypothetical protein EUGRSUZ_C03713 [Eucalyptus grandis][more]
gi|629076871|gb|KCW44804.1|5.3e-1473.68hypothetical protein EUGRSUZ_L01633, partial [Eucalyptus grandis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C015238MELO3C015238gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
LA7YI08FM1LA7YI08FM1EST