MU58848 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU58848
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNo hit
Locationchr6 : 9041095 .. 9042185 (+)
Sequence length604
The following sequences are available for this feature:

transcribed_cluster sequence

TAGAATTTCCATTTTGTTGTTAGTCGTTACCTTGCAATGGCCTCAGAAAACATTGTTACAATACTAGCCATCTTCACAGTGTTCCAACGTCTGTTAGTGTTATTGATGATGTTGGACAAACTACTAAACGAAAATGTGGAAATTGTGAATGTCATTCGTGATGCCATAGAATGTGCGAATGACCAATTGAGGACCATTGCAGAGTGGCCAAAGTTAGCTATGCAAGACGAAGACGCAACCCGATTGGAAGTCATTAGACAGTTGCGGGTTATTCCTGAGCTAAGTGGATTGGATAGGGCACGGTGCCTGAGGAAGCTGATGCAGAACTTGGCCGACATGAAAGCATTCCTGGTCGTACCCGAGGAGATGAAGATGGACTACTGTAAGGTCATTCTACAAGATGACGCGTGATTGTTTGTCCTATTCCATTGCTTGTCTCGTATTTTTTGTTGTTGCATTATGTTTCCTGTATTTGAATTTAGTTTATAGCTCCCTTGCACCCATCTTTTTTCATTTAGATTTCTTTAGGTACAAAGGAAATTATGTTTTCAGTACTTTGTATTTTTAATTTTTATATACACGTATTTAAATTTTTATGAATTAC
Library categoryESTs
melon CI library1
BLAST of MU58848 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 1

Query: 148 NVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCLRKLMQN 207
           +++R AIE  N+QL  IAEWP L  QD   TR E++R L  IPEL+ +DR R +R LM+N
Sbjct: 571 DIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRN 630

Query: 208 LADMKAFLVVPEEMKMDYCKVILQDD 267
           + DMKAFL VP+ MK  YC +ILQ++
Sbjct: 631 VDDMKAFLEVPDHMKYPYCSLILQEN 656

Query: 268 327
           
Sbjct: 691 656

Query: 328 387
           
Sbjct: 751 656

Query: 388 406
           
Sbjct: 811 656

BLAST of MU58848 vs. TrEMBL
Match: A0A0A0LEB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G643760 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.8e-13
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 1

Query: 130 ENVEIVNVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCL 189
           +  E + +IR+ ++  NDQ   I EWP +  Q +DA   EV++QL+ IPELS  DR   +
Sbjct: 14  QTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAIPELSTHDRRCLM 73

Query: 190 RKLMQNLADMKAFLVVPEEMKMDYCKVILQDDA 249
             LM N+ DMKA   +  E+K+DYC V+L+D+A
Sbjct: 74  WTLMCNVHDMKALWEISNELKLDYCTVMLEDNA 106

Query: 250 309
           
Sbjct: 134 106

Query: 310 369
           
Sbjct: 194 106

Query: 370 409
           
Sbjct: 254 106

BLAST of MU58848 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-10
Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = 1

Query: 145 VNVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCLRKLMQ 204
           V  I  A++  N+QLR IAEWP   + +++  R E  R LR +PEL+ LDRA   R L+ 
Sbjct: 535 VEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLS 594

Query: 205 NLADMKAFLVVPEEMKMDYCKVILQD 264
            + D++ F+++PE+ +  +C+V+L+D
Sbjct: 595 RMDDLRGFVLMPEDEREGFCRVLLRD 620

Query: 265 324
           
Sbjct: 655 620

Query: 325 384
           
Sbjct: 715 620

Query: 385 403
           
Sbjct: 775 620

BLAST of MU58848 vs. TrEMBL
Match: A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-09
Identity = 33/92 (35.87%), Postives = 58/92 (63.04%), Query Frame = 1

Query: 130 ENVEIVNVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCL 189
           ++ E V+VI + +E  NDQL+ IA W K     E    +EV++QL+ I EL   DR + +
Sbjct: 36  QHYEAVDVISNEMEVRNDQLKAIANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLM 95

Query: 190 RKLMQNLADMKAFLVVPEEMKMDYCKVILQDD 249
           + +   + D++ FL  P ++K++YC+V+L+D+
Sbjct: 96  QIIFHMVDDIEGFLSCPTKLKLEYCRVLLEDN 127

Query: 250 309
           
Sbjct: 156 127

Query: 310 369
           
Sbjct: 216 127

Query: 370 406
           
Sbjct: 276 127

BLAST of MU58848 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 96.3 bits (238), Expect = 6.6e-17
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 1

Query: 148 NVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCLRKLMQN 207
           +++R AIE  N+QL  IAEWP L  QD   TR E++R L  IPEL+ +DR R +R LM+N
Sbjct: 571 DIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRN 630

Query: 208 LADMKAFLVVPEEMKMDYCKVILQDD 267
           + DMKAFL VP+ MK  YC +ILQ++
Sbjct: 631 VDDMKAFLEVPDHMKYPYCSLILQEN 656

Query: 268 327
           
Sbjct: 691 656

Query: 328 387
           
Sbjct: 751 656

Query: 388 406
           
Sbjct: 811 656

BLAST of MU58848 vs. NCBI nr
Match: gi|659133698|ref|XP_008466863.1| (PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 8.6e-17
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1

Query: 148 NVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCLRKLMQN 207
           +++R AIE  N+QL  IAEWP L  QD   TR E++RQL  IPEL+ +DR R +  +M N
Sbjct: 423 DIVRIAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMHIIMHN 482

Query: 208 LADMKAFLVVPEEMKMDYCKVILQDD 267
           + DMKAFL VP+ MK  YC +ILQ++
Sbjct: 483 IDDMKAFLEVPDNMKYSYCNIILQEN 508

Query: 268 327
           
Sbjct: 543 508

Query: 328 387
           
Sbjct: 603 508

Query: 388 406
           
Sbjct: 663 508

BLAST of MU58848 vs. NCBI nr
Match: gi|659123900|ref|XP_008461893.1| (PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1

Query: 148 NVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCLRKLMQN 207
           +++R AIE  N+QL  IAEW  L  QD   TR EV+RQL  IPEL+ +DR R +R L+ N
Sbjct: 165 DILRTAIEYGNEQLNRIAEWHVLQRQDATQTRQEVVRQLEAIPELTLMDRCRLMRILIHN 224

Query: 208 LADMKAFLVVPEEMKMDYCKVILQDD 267
           + DMKAFL VP+ MK  YC +IL+++
Sbjct: 225 VNDMKAFLEVPDNMK-PYCSIILEEN 249

Query: 268 327
           
Sbjct: 285 249

Query: 328 387
           
Sbjct: 345 249

Query: 388 406
           
Sbjct: 405 249

BLAST of MU58848 vs. NCBI nr
Match: gi|700203303|gb|KGN58436.1| (hypothetical protein Csa_3G643760 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 9.8e-13
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 1

Query: 130 ENVEIVNVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARCL 189
           +  E + +IR+ ++  NDQ   I EWP +  Q +DA   EV++QL+ IPELS  DR   +
Sbjct: 14  QTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAIPELSTHDRRCLM 73

Query: 190 RKLMQNLADMKAFLVVPEEMKMDYCKVILQDDA 249
             LM N+ DMKA   +  E+K+DYC V+L+D+A
Sbjct: 74  WTLMCNVHDMKALWEISNELKLDYCTVMLEDNA 106

Query: 250 309
           
Sbjct: 134 106

Query: 310 369
           
Sbjct: 194 106

Query: 370 409
           
Sbjct: 254 106

BLAST of MU58848 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 6.3e-12
Identity = 37/92 (40.22%), Postives = 61/92 (66.30%), Query Frame = 1

Query: 127 NENVEIVNVIRDAIECANDQLRTIAEWPKLAMQDEDATRLEVIRQLRVIPELSGLDRARC 186
           +E  E V VIR  +E  N+QL+ IA+WPK     E   R +V++QL+ IP+L   DRA+ 
Sbjct: 213 SERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKL 272

Query: 187 LRKLMQNLADMKAFLVVPEEMKMDYCKVILQD 246
           ++ L ++L  ++ FL +P E+K++YC ++LQ+
Sbjct: 273 MQILFRSLEAIEGFLSIPTELKLEYCNILLQN 304

Query: 247 306
           
Sbjct: 333 304

Query: 307 366
           
Sbjct: 393 304

Query: 367 403
           
Sbjct: 453 304

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GCB5_CUCME3.5e-1753.49Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LEB9_CUCSA6.8e-1343.01Uncharacterized protein OS=Cucumis sativus GN=Csa_3G643760 PE=4 SV=1[more]
E5GBB2_CUCME3.2e-1039.53Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KFW0_CUCSA2.7e-0935.87Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307136287|gb|ADN34114.1|6.6e-1753.49retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659133698|ref|XP_008466863.1|8.6e-1752.33PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo][more]
gi|659123900|ref|XP_008461893.1|1.0e-1452.33PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo][more]
gi|700203303|gb|KGN58436.1|9.8e-1343.01hypothetical protein Csa_3G643760 [Cucumis sativus][more]
gi|659082641|ref|XP_008441954.1|6.3e-1240.22PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C019393MELO3C019393gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
CI45E09CI45E09EST